Scyr009800.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- CDC5
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000640.1:14096600-14098865[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9e-12 1.2e-08 35.0 0.0 1 38 228 266 228 270 0.97 2 4 7.9e-05 0.11 12.8 0.0 2 42 284 328 283 332 0.87 3 4 6.1e-08 8.2e-05 22.7 0.0 3 46 340 384 338 384 0.93 4 4 7.5e-12 1e-08 35.2 0.1 2 43 391 433 390 436 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATCTGTTAAACGAAGCGCAGGATtaccaaaaacaattgcagGAACTAGCAACGTTGCTATCTGCCACAGCTCACGGTGATGTGGACGCCCTTAAACTAAATCAGGCTCTTCAGCAGTACCTTGAACAGTTCCGTCAGCAGAAGCTGGAGCTGCTGCAGAAAGTGCGAACGCTTTATAAGCGTAACGAGGAGATACTTACTAACCGAATAAAGAAGCGCACTGGCATTAATGAAGTCGTTGGAATGAGCGGCGCTGTGCTTCGCGGCGGAACATTTCGTTTTAAGGgtaatttatattttcgtGATGCAGACGGACGCAGTTGTCCCAACAATGAGGACTACGAGAGACGCAGCAGCTACGAAATGTTTCCCACCGATTTAGATATGCGCTCTAAGCACGTTTGGACGGTGCTGGACAAGAAAAACATTGTAATGGGTGTTAAGCAACAGCTGTTGGATCAAGCCGCCTTCAGTATAAAATGCATCCCAAAAGTCAAAAGACGCAAGCGCAAGGCCATTGATCTACACCAGCATTCGGTTGAACAATTGCTAAGTGACGCTGATGACAAGTTTAGCATTGATTGGAATCAAATAAGCACACTGGACCTTGAATGTCGTCATTCAGCCTACAGTTGTGAGGCCATGTGGCTTGTGTATATGCAGCCGAAGATCAAGCGCGATGAATGGACAGCCGAAGAGGATCGGATTCTGGTGGCAGCTGCCCAAAAAAATAAGATGCAAGATTGGATAGCCATTGCGTCTAAAGTGGATGGGCGCACGGATTATCAGTGCTTTGTGCGCATTCAGGCGGAGCTGCGCAACAAACTAGAGTCAGAATATACCAAGAAATGGTGCCAACAGGACAGCGAACGTTTGCGCGAACTTGTCTTGAAAAATACGGTAAACGGCATTGTTAACTGGTCCGAAGTTGGCCAACATTTTCCAAACAGAGCGCGATCTACACTAATTGCACGCTATGTATACAGTCTAAGTCCCAATATCAGTCATGcacCTTTCACTGAGCAAGAGGATGTATTGCTGTATGCTGCCGCTAAGGAATATGATGGCAAGTTCAATCGCTTTCCGCGCACGCTATTTCCCAATCGCTCACTGGCCCAGCTGCGCACTCGCTATCAGAATGTGCTGGCACAGCGTAACAAAACTGAATCTTGGTCTGTGAAGGATGACGAAAATctaatgaaatttgtttctaAACACGGTACTTCGCAGTGGGTGAACTGTGCCAAACATTTGGGCAATCACACGCGCACCAGCTGTCGCACACGCTTTTTGGTCATCAAGCGATTTCTGGAGAAGCATCCAAATTCAACGGAAGCGGATTTACCACGGCGCAAGTCCCGTAAAAACGATATAGTTAACCCTGAAAATTGGGAGCTATGTTTACAAGAAATGCAATCAGATCCAGATGCAGAGTTTGTGACCACTGTGTCGTTAGTGAACTCGCCACCActcaataataacaatagaaAGAATTCTTCAATTAAAGATAAATATGATGAAAATTGGGAGGTACGTTCACCGGACTTAAAAGCGGAAGCACTGCCGTCGTCAGTACAAAAGATAGTGGACACATTGGAGAAAAGAGTGTTTGAGTATTTCATGTACGGCTATAATCTCAACCTACGATCGCctgcaataaaaattccacTTCCACAAAACACGAATAATCTACAAGGTATGGCTTCTGCACTATGTTTTCAGTCGAACGGACGTAAGCGCATACTCATAAAAAGCCCTTGCCTACCCGAGCAGCTTAATTTCTGCCATAACTTAGCGCTCTGTCAATTGCCGGCGTGTACGGAAAGTAAGACAGCATCAAAATTTGTACCGCCAAACTGGTCCACCATGATGGGTTTTCGAGCCATGTGCATATTGTCAATGCGGACACCCATTAACTTTAATGTATCGAATCCCGAAAATAGTTGGTATGAATCTCAGCCAGAATTACGGCTGTTTCGACAACGTTTACGCACACTTTTCTATCGCACGACTCTGTTGAGTCGCCTGGAGGTGGCGAATTTCGAGGAACTGCCGAATGTATTGATGAAACTGTCAGACTCTATTGTAAATGACGACTTGGTAAACACTTCAAAATCAGATGACGATGATTAA
- Protein Sequence
- MCDLLNEAQDYQKQLQELATLLSATAHGDVDALKLNQALQQYLEQFRQQKLELLQKVRTLYKRNEEILTNRIKKRTGINEVVGMSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYERRSSYEMFPTDLDMRSKHVWTVLDKKNIVMGVKQQLLDQAAFSIKCIPKVKRRKRKAIDLHQHSVEQLLSDADDKFSIDWNQISTLDLECRHSAYSCEAMWLVYMQPKIKRDEWTAEEDRILVAAAQKNKMQDWIAIASKVDGRTDYQCFVRIQAELRNKLESEYTKKWCQQDSERLRELVLKNTVNGIVNWSEVGQHFPNRARSTLIARYVYSLSPNISHAPFTEQEDVLLYAAAKEYDGKFNRFPRTLFPNRSLAQLRTRYQNVLAQRNKTESWSVKDDENLMKFVSKHGTSQWVNCAKHLGNHTRTSCRTRFLVIKRFLEKHPNSTEADLPRRKSRKNDIVNPENWELCLQEMQSDPDAEFVTTVSLVNSPPLNNNNRKNSSIKDKYDENWEVRSPDLKAEALPSSVQKIVDTLEKRVFEYFMYGYNLNLRSPAIKIPLPQNTNNLQGMASALCFQSNGRKRILIKSPCLPEQLNFCHNLALCQLPACTESKTASKFVPPNWSTMMGFRAMCILSMRTPINFNVSNPENSWYESQPELRLFRQRLRTLFYRTTLLSRLEVANFEELPNVLMKLSDSIVNDDLVNTSKSDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327817;
- 90% Identity
- -
- 80% Identity
- -