Stum014276.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza tumidula
Gene Symbol
dl
Assembly
GCA_035044465.1
Location
JAWNNW010000984.1:262139-267906[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.2e-74 1.8e-70 236.3 0.0 1 169 52 222 52 222 0.99
2 3 7 1.8e+04 -5.1 1.9 114 129 1135 1149 1126 1159 0.39
3 3 2 5e+03 -2.7 2.2 106 137 1236 1267 1221 1284 0.61

Sequence Information

Coding Sequence
ATGTTtccaaatcaaaataatttggcCACAGCGGGTGCAGCAGGCGatgcccagcaacaacagcaaaacctCAACTACAATGgcctgcaacaacagcaacagcaaactcAACAGTTACCACAGTCTGCCAAGAATGTGCGAAAGAAACCTTATGTGAAGATTACAGAGCAGCCAGCTGGTAAAGCCTTGCGTTTTCGCTATGAGTGCGAGGGTCGATCGGCGGGCTCCATACCCGGCGTCAACTCAACGCCCGAGAACAAGACCTATCCGACAATAGAGATTGTGGGTTACAAGGGACGCGCCGTTGTCGTCGTTTCCTGTGTTACCAAGGATACACCATATCGTCCACATCCCCATAATCTGGTTGGCAAAGAAGGGTGCAAGAAGGGCGTCTGTACGCTGGAGATCAGCAGCGAGACAATGCGAGCCGTGTTTAGTAATCTGGGCATCCAATGTGTCAAGAAGAAGGACATTGAGGCTGCGCTAAAGGCTCGAGAAGAGATACGCGTGGATCCGTTTAAGACTGGGTTCTCGCATCGTTTTCAACCCTCGAGCATTGACTTGAACTCGGTGCGTTTgtgctttcaagtatttaTGGAGAGCGAGCAAAAGGGACGCTTTACATCGCCACTCCCGCCGGTCGTCTCTGAGCCAATCTTTGACAAAAAAGCCATGTCTGATCTCGTCATCTGCCGGCTTTGCAGCTGCTCGGCCAGTGTGCTGGGTAACACGCAGATAATATTGCTGTGTGAGAAGGTTGCCAAAGAGGACATCACAGTTCGTTTCTTCGAAGAGAAAAACGGTCAGACGGCCTGGGAGGCATTAGGTGACTTTCAGCACACAGATGTGCACAAGCAAACTGCCATTACTTTCAAAACGCCGCGCTATCACACGCTGGAGATAACGGAGCCCGCCAAGGTTTTTATACAGCTGCGAAGACCATCAGACGGTGTTACCAGCGAGGCTCTACCCTTTGAATATGTGCCATTGGACTCAGGTAGGCATACATTCTGGAATCTTCATCGGCATCTCAAGCGGAAGCCCGATGCAGACATCTTTCAGCAAATTCTGTCGATCGACTTGGGCGCCGCCAAACGCGAGCCGCCAAATATTGAGGTTATTGATCTTAATACACCTATTTTGGAGCAGCCAGAACCGATACTGATTGATGTGCCGGCGGCAGTGACAGAGGATGTCACAGATCAAGCGCCGCAGGACATGGAAgcagctgatgctgctgccgaAGCTGAGGCTGAAGCGGATCGTCTGCGTACCGAACTCGAAATCGATTCTATTATCGATCAGAAGGTTCGTGAAATGGAACAACTTCAGATGGAGCAACAGTTGGAGCAACAGTTGGCAGCGCCAGAACCACATCCGCTTACGGCTAACGATAAGATCAACGAGTGGATGAAGTCAAATGaactacaacagcagccacacgAGCCGAGTCCGTCTCCTGGTGAAGCCGAGACTGAAGACAGTGATGCCACTGAGGCAACTGTGGAGACCCAAGTGGCTGCCACAGATGAGGATAAAACGCTTAATGAGCTGCTCGAACAGGTGGCCGAGCTGGATGAGATTTATACGGATTTTGTCATGCAACGTGATACGTACAACAACACACTGCAGAATGAGTTGCATAGCATGGATCGGCCACCGATGCAGGTTGACGATAGCTTTGATGATGCAGCCACTTATACGAGTTTGCAGATAGCATTTAAGAACCCGATAGTTATACCAATGGAAGATATAATGCCACCAACGCCACCTATGTCTCAGTGTGCACCTGAGGATGCACAGCATTACGATGCGGTCGAAGTGAactcgcagcagcagcagcagcgtcagctACAGGAAGTTATCAGGAATCACGAGCAAGAACAGTCGAAACTGCAGGAGGCTGCAATACTATTAGCTTCTGAGGAGGAAAAACTGCCACCGTTACCTCCGAAGCGGCTGCGTAAACAGGATAGCAACGCTGAAAATCGCTCGATAGATGCGAACGGCGTGGACGCAATATCCGTTCGTGAGAAGCCACGTCTACCGCTCCCAATTATTCATCCAAGAATAGCTGATCAGCCTGCGGCGCCCACAAAACGCTTACCCCAGCCACCGGAAACGAAGCCCAAGGCGAAGCCAAAGCCAGAAAAGAATCCAAATTTCAATACGCTGCCGCGTCAAAAGAAGCCCGGGTTTTTCGCGAAGCTTTTCTCGCGTCGCAAGAGCAAACCAGAGCTAATGGATCAAAGCAGCGAAAGCTGTTCGCGTCTTGACTCGAAGGCAACCAGTGCATCGGCTAGTCGTGAGCCCAGCTTGGATAACGTAAACATACGCGATCCGATGCGCACCTCGCAGCGCAAATCAGGTCCTCCAAAGGCGAGCGGCGCTGCTGCAGCACGAAAGTCTGGCAAGACCGGCAAGCCCTGTGGACGAAGTGTTAGCAGCGTATCGGGCAAGCGACCATCGTATCTCAATGCAGATGTAGTGCACATACCATTGAAGGGCGAGAGTGCCAGCAGCTTGCAGCAGGCGCCCAATGAAGCATATTCGAATGCCAGCACGATAACGGTGGGCGGTCAGCTAGACAGGCGCACGGCATCCGCTTTGCAGCTGGCCGATATACCCATTAGTGAGGGCGGCATGGAGCTGGTGGCCATTGCCGATCGCCAGAGTCTTCACAATTTGGTCAGCTCGATTGAGGCGCACTTTGATGTGCAGATGGATCCCAATCTTGATCTTACTGAGGTCGAGCACTTTGCGCTCTACACAAGTATTCCGCCACAAGCGACTGTCAGCGAGTTTGATGAGACATCCGCCTACTATGCACCGGTCGATGCTGGCGAGATCTTGACTCCCGATCAGGTTGCTAAACGTctggcagcagcaaataaCAACAATCCAGCACATTTGAGACGAAAACGTCAAAAGACTGGCGGTGATCcaatgcatttgttgctgcagcaacaacagaaacaacagcatcagAATGATCATCAAGATGGTAGACAAAACAACATGAACTGTTGGAACGCACAGAACATTCCGCCCATTAAAACAGAACCGAGAGATACCTCACCGCTGCCATTTGCATTGTATCGTGCACAACCTGAGTTGACCCCCTCACCGCAGCCATTGTCGCCAGCAAGCAATTACAATCAGAATAGCACGCCATCGCCCTACAATATGGCAGCGGCAGGTGCAGTAGCGCCCGGCAATGgtcagcaccagcagcagcagccgcagatgcagcagcaacagctaatGTCACCAAATCAtcttcagcaacaacagcagcagcagcaacagcaacaacaacagcaatatgcTGCTAGTGGCGCAGGCAATCTAGAGTTGGGAAGCAACTACAATCCGTTTACGCAACAACTGCTtgcacagcatcagcaacaacagcaacaacaacaacaacagcagcatcagcagcagccgcaacagcaacatcaactacAATATAACAACAATCCAAATCCCTTTGTAACAGCTGGCAACGGTGCGCATTGGGAGAGTAAATTctcagcggctgctgctgtgccgTCGGCCGCACCAACAGTTgtcagtaacagcaacaatctaAGCAATCTCAATAATCCATTTACCATGCACAATCTGCTGACCTCAGGCGCGGGCGCTGCCAGCAATCTGCAATGGAATCTGACAACCAATCACTTGCAAAATCAGCATAccctgcagcaacagcaacaacagcagcagcaacagcagcagcaacagcaacagttgcagcaacacGTGACGCCAATGCATCAGCAATACGACAGCAATGTTCCCGTCaacaacattaataataataataataataacaacgacaacatcaacatcaacaacaacaatgagaacgGTCCAACGATCAGCAATCTGCTTAGCTTTGACAGCGAGCAGCTGGTGCGCATCAATTCGGAAGACCAGCAAATGTTGCGCCTCAATTCAGAAGATCTGCAAATATCAAATCTATCAATATCTACATAA
Protein Sequence
MFPNQNNLATAGAAGDAQQQQQNLNYNGLQQQQQQTQQLPQSAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTAWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDADIFQQILSIDLGAAKREPPNIEVIDLNTPILEQPEPILIDVPAAVTEDVTDQAPQDMEAADAAAEAEAEADRLRTELEIDSIIDQKVREMEQLQMEQQLEQQLAAPEPHPLTANDKINEWMKSNELQQQPHEPSPSPGEAETEDSDATEATVETQVAATDEDKTLNELLEQVAELDEIYTDFVMQRDTYNNTLQNELHSMDRPPMQVDDSFDDAATYTSLQIAFKNPIVIPMEDIMPPTPPMSQCAPEDAQHYDAVEVNSQQQQQRQLQEVIRNHEQEQSKLQEAAILLASEEEKLPPLPPKRLRKQDSNAENRSIDANGVDAISVREKPRLPLPIIHPRIADQPAAPTKRLPQPPETKPKAKPKPEKNPNFNTLPRQKKPGFFAKLFSRRKSKPELMDQSSESCSRLDSKATSASASREPSLDNVNIRDPMRTSQRKSGPPKASGAAAARKSGKTGKPCGRSVSSVSGKRPSYLNADVVHIPLKGESASSLQQAPNEAYSNASTITVGGQLDRRTASALQLADIPISEGGMELVAIADRQSLHNLVSSIEAHFDVQMDPNLDLTEVEHFALYTSIPPQATVSEFDETSAYYAPVDAGEILTPDQVAKRLAAANNNNPAHLRRKRQKTGGDPMHLLLQQQQKQQHQNDHQDGRQNNMNCWNAQNIPPIKTEPRDTSPLPFALYRAQPELTPSPQPLSPASNYNQNSTPSPYNMAAAGAVAPGNGQHQQQQPQMQQQQLMSPNHLQQQQQQQQQQQQQQYAASGAGNLELGSNYNPFTQQLLAQHQQQQQQQQQQQHQQQPQQQHQLQYNNNPNPFVTAGNGAHWESKFSAAAAVPSAAPTVVSNSNNLSNLNNPFTMHNLLTSGAGAASNLQWNLTTNHLQNQHTLQQQQQQQQQQQQQQQQLQQHVTPMHQQYDSNVPVNNINNNNNNNNDNININNNNENGPTISNLLSFDSEQLVRINSEDQQMLRLNSEDLQISNLSIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01320962; iTF_01326935;
90% Identity
iTF_01320962; iTF_01326935;
80% Identity
-