Basic Information

Insect: Scaptomyza polygonia
Gene Symbol: JARID2
Assembly: GCA_035044585.1
Location: JAWNNU010001673.1:6506990-6515287[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.2e-22 2.2e-18 67.0 0.0 6 89 1956 2037 1951 2037 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.2e-22	2.2e-18	67.0	0.0	6	89	1956	2037	1951	2037	0.92

Sequence Information

Coding Sequence: atggTTGTCTCAAAAGACAACAAGCGTCGACGTAAGGAAACAGATACGCCGCCAACGTCATCGGCcgcagcggcggcggcaacaCTGGCTGTAGAGTCATCACCCGAGATGCCTAAAAGAACAAAGGTGCAGGCACAGCGTAAATTTGCACAAGGCCAAAGCGCGCCCAATGCCGGTGGTGTTGGATTTAATGTTGGCAATGTTGTAGCAGTAGCACCAGGATCATCGTCATCTGGTCCAAGCACATCGACTGATAGCCAGCAGCCTCCAATTGAGATATTGCCTAACCAGCGTCCCAAGCCTCAGGATTTCCTTACGTTCCTCTGCTTTCGGAGCTTTCAGGGCAAGCCCAAGGCAAACGATGCTGCCCCAACCAGCAGTGATGCAgttaacaacaacaccaacaagaaaaacaacagcagcagcagcaaaaagaaaCGCGGCAGACCTGCTAAAAAATCTGGAGCcgagcaactgcaactgcagcagcagcaacagccaccAATGCCAGAAACTAACAAAATAGCTAgtgataaaattaaatcagcAAATTCGCCGgcaacgacgacaacgacggcAACGTCGCCTCCACCTGCTTCACCTTTGCTGCTAGCTGGAGCAGTGCGTAAACGTGCCGAGGTGGTTGCCGGGGGCAATAGGCGAGGAGGAAGACGTCAGGAGGCTTTAAAACGTCGATCGAATCGAGCCAGCGGCGGCACAAAGGACAAAGATGATGAACGAGAGGAGCAAGAACAGGcgccgcagcaacagcaggagGACAACGATGGTGAAGACCCTGTAGACGAGGAGGACGATGAAGATGAGTTCTTTTCGGCGCACGATGCTAGCTCGCGCAATGGAGGCGCCGCTGATGAAACGCTCTCCAAGTCGGAAACAACGCAATCAAACACGAGGCGTAGTCGTGGCAAAAAAACTGGTGCAGCCGCCGATTCACCAGCTGCAGTCCCAGAGAACAGTGCTGGCAAGGAGAAGGAAAAGGAGAAGGGGCCAGTGAAACGCTTTCGTCAACAACGAGAATCCCCAATTTTTATACCCTCGCCAGAGTCCTCAGGACGTATGACTCGACAGCGTGCTTTTTTTGAGCCAGTCAAGGTGCCGCCAAAGCAAGATTCCGACCCAGAAGAGCAGCAGGTGGAGGACCTCAAGGAGAAGGAGCTTAAGCAGGAGCAAGAGCGTAAGCAAAAAGCGTCACTAGAACCCAAGCCCCAGCAGATTATCAAGGAGAAAACCAACTCAAGCATTTATGCCAAAGATGCAGTCAGGCTCGAGAATGGCGTCACCacggcaacagctgctgctgcaaccgACCAACAAAAGAGTCTGAATGTCTTTGATTTTAGCTCTGATGATGAGCAGCCGCTGGCCAAAGCCATCAAGTTGAAAAAAGGTGGCAAGAAGGGTGCCGGAGCAGCTGGAGCAACTGCAGCCGTAACAGCAAATGCACGTGGACGCAAATCAGCCGGTGGTTcagccaaaaagcaacaacaacagcagcgggAAGAGGAGaaggcaaaagcaacagcagcagcacccaCAGTAACAGTGACGCCACCTTGCAAATCCGAAGAACCATCCAAAGCAAAGCGCGGCAAGGCATTGAAAAAGAAAGCTGAATCGGATAACGccggcaacaacaatgctGCTGTAGAGGAGGCAGAGGAGGAGCGGAGACACGAACCCGAACTAAGTCCACCATCACCCAAAAAGCcgacaaacaacagcaacaataatgcGCGTCCTGCTCGACGCCAGGCTCAACTTAAAGTCCAGCAGCGCTCACCGAGTCCCGGGCCGCAGCGCAGTCAGCGACCGTCGCGTAAAACAAAAGAAGCGGCTGCCATTTACATGGGCATCATTGGTCACAAACTGCAGATGGCTGATGACGAAGATGATGATCTCTCTATGGACAGTTTTCCCGACATACCCAACGTCAAGCAAATGGAGAAAATGGAAAaggagttaaaaaaaaatgccgcCGGCAAAGGAAGCAATGCAgagctaaaaaaaacttcgataaagccagcagcaacaacaacgacgacaacaacagcagcagcaacaacaacaacaacagaagtaGCGCAAGGATCAGGAGTGGCAGACTCAAGAAGGTTAAACGCTGCAGCTGCTGTCGAACAACCAACtgaaacatcaacaacagcatcagtAACGCCACTTGCTGCTCCTCCTGTTCCTGCTCCCCGACGCGGTCGGCCGCCTAAGCAGGCAAAAGGTGCAACGGGAGCAGGAGGGGCAGCAGCTGCCATAGTTAAGCCTCAGATAGAGGGTATGCTGGTGAAAAAAGGTGCACTGGCTTTGGCTAAAGCAAAGtccgaacaacaacaacagctgcagcagcagcaacaacaacaaaaagtcgACTCCGATGCTGAAGAGGATTTTTTAATCAACGAGGAGCTAAACGAAACGAAGCGCAAGCTCGAAAAAAGTTTTAGCGACTCGGATGATGAGCCTCTGGCTATAAAAGTGCCAACAGCTGGatcgacaacagcagcagcagtaactacaacaacaataacaacaatcacagccaaagccagcagcagcaaaacagaaacaccaacaacaacaaatgtgacttcaacaacaaagacaGCATTCACGATcacaacagcgacagcaacagttgcaccaccaacaacaacaactgcaacaagaTCAGTTGCCGCACCgacggcggcagcagcagcgggcGCAGCAACTTTAAAACCACCTCAGTTGAGCGTTGCAACAGCCACGCCCATAACGCCCCTGACAATGCTACCCCTGACCACAAAACCCTCACCATTCTCCATATCCCCACCAAGCTACGCATCCGCAGCAGCCACACTCAAAGCAATGGAAAAGAAATCCCCTGTGCCCACATCAAAGATACTTAATGTGCCCGCCACATATGCGCTGCCCGGTGGAGGTGCCAGTTCTGGCCTTGTAGTTGGCCTGGGAGTGGGTGCTGTTGGATTTGGCAAGAGTACATCATATTTGCCGCAAGCATCGCCACACTATCAATCGCCGTATGTGCGTCCGCCAAcattttgtgctgctgctggcgctgctgctgccattggAAACAAGACACCACatccgcagcaacagcagcaacagttgctggcaacagcaacaacaacaacatcacagACATCACCACTCAAATACCAAACGGCGCCCACAATCTATCCGCCACCCATTGAGGCATATCAATGTCCCAAAATCAATCCCAATTTCCTAACGCCTAAATATGACCGGGCCAGCATATTGCCGcgtgtcaacaacaacaataatgcagTAACCATAAGCAATACGAGCAGTAACAATTTTACAGCGCCAATAATTTCAAGGGCAACACTTAGCAGTCTGACCACGCCCACAACGACAGTTGCTGCGGCGGCAGTAAAAACGACACCAACAGTAAGTCAAAGTCTTAGTTTAAGTATAACTTCACCAACGCCAGCTGTGGCATCTACATCGGCAGCCGCAGCGGCGGCAGCGTCAGCAACAGCTattgcacaacaacaacaacagcaactaaatCAACCACATCCGCAACAGCAATCGCCAGCATTGACAATGACGCCAACGActagcaccaacaacaattcgGATCCGCTCAAAGATGAGATTGGCAGCATTTTGGCCCAGGCAACGCTGATGCCCAGCAAGGAGGAGTCGGGCAAGATATTTGGCATTGCCAGCGTAAGTTTGGCACAAAGCTCGGGACCGGACAACACTAAATGCACTCTAGGCAAATGTGGATCGATACATAAACCCGTTCTCGGTCCCGTTGTGCCCACCGAGGCCTACTTTGGTGATCAGCTGTCTGGTAAAGAACGTCGCAAGGCTAAGGTGAATATGACGCATGAACAGATTCAAAAGTGGCTAATTGAGTGCAGCTCAAATCCGGATGAGATTCAAGATGATCTCGATGATGAGTACGATGATAGCTTGCGGCCGCAGCAATCACAGACACCGCCAGGTCCGACGCGCGATGACAAGGAGAGCACCAGTTTTAGCAGCTCCTCGAAGAACACGCGTGTTGAGCTGGGCAAAAGTGAGAGTGCCTGGTCGGCAAAGGGGCCATCGCTCAAGGCTACACCGGTGCTTGTGAGCACAGCAGCTGCGGCTGCCGCAAATCGCAGAGATGTGGACACAGAATCGGATACCATGGACTTTGATAAGTGCGTAACGCCCGTAAATCTCACCCAGAAAAAAGATGCGGCTGCCGCTTTGGCCAACGATAAGCGAAAGCCTAAGAATGCAGTAAGGgcgtcagcagcaacagttgctgctgctgcgacagctagcaacaacaacaaacgtgGAGTAACTGCTGCCAATAAACGCATTGCAGCTGCCACAAAGATGTCAACGCCAACACCCACaaatagcagcagcaatacGCCCACATcagcaacggcaacgacaacaacaatgacaacaactacaacaatgcCTCCAAAACGTACGCCCATCTATCAGAGTCCAAACAAGAGCAAAGCACAAACCCAGCTGGACAATAAGAAGCAGCAACACAAATTGCCCGCCAAAACTTCAGTTTATGCGTTTGGAAAAGATGAGGAAGCAACGgccacagcaacaaaaacagcagttgcagcaaccaaaactacaacagcaactcTTGCTGCGGGCAAcaaggcaacagcaacaaatcgTCGTCGCAATGCTGAAGttgaagcaacaacagcagcaacgccGCCACAAGCGCTCAGCGAACGTTCGCCAACTAAGAAACGTGCAGCAGCcacagcggcagcaacagcggTGCAGTTAACTCTCAGTCCCACGGACAAGCTGGAGAAGcccaaagcagcagcagcagcagcgcgcaaaaaacaacaacaacagcagcagcaacagcaaaaacagcagcagcagaaggatcagcagcagcagaaagatcagcagcagcaaaaggatcagcagcagcagaaggaacaacaacaaaaggaacaacaacaaaaagaacaacataaaaaggaacaacaaaaaaaggaacAACATCTAAAGGAACACCAACATAAggagcagcagaagcaacaacagctgaaaAAGACGGCAGCCGCAGAAGCAGCGGCCATCGCTGGTGGAGATTCAGATGCAGATGGTGCCACTTTTTATATACCGCTACGTCAGGGAGCCAGCAGCGGTGATGGTGGCATACAGGGTGTCGCTGTTAAGCTGGGACGCGAGGGACCCGATGGACCCAATCAAAAGGTAGTAATGCAAGCGACGCTTGTGACCAAGGCACAAATGGACACCAACTCCAATAAGCCAATGCCAGATAATGAGTTGGTCAAAACGTTGCTCAATGCGGCCAACACAAACAGTGAGCCATCGACGCCCAGCAATAACAGTTTAAAAGCCAGcacttcagcagcagcagcggcggcaggAGCAAGCGCAATCACCTCCGGTAGTCTAGTTCGGGTCAATTCGAATTCATCATTATTCTCTGGATCCGCCAAATCACGTACAGCAGCAGCttcggcagcggcagcaaatGCCTTGGCCAAAAAGTACAAAGACGATACGCCCATTAAGATGGCCAATAATACGGCATTTCCACGACATGATGATCCCACACAAATGGTCGAGGCGCCCATCTTTAAACCCACCGAGAAAGAATTTGCCGATCCCATAGAGTTTATTGAGCGAATAACGCCAATTGCTGCCCGATTTGGCATCTGTAAGATAATACCGCCCGCTAGCTTCAAGCCCGAATGCCGCATTTCAGATGAGATGCGTTTCACGGCATACAACCAGTATGTACACAAGATGTTGCATCGCTGGGGTCCCAGTGCCAAGGAATTGAGTGCAATCAGAAAATATTTGGCTACGCAAAGCATTGTGATGAATCATGCGCCCTGGATTGGCGGCATGGAGGTGGATTTGCCACGTCTCTATCACACTGTACAGGAACTCGGTGGCCTCAAAGAGGTTATCGAGAAGAAGAAGTGGGCGCGCGTGGCTGAGGAGATGTGTATACCAAAGCTGGCACAGGATCGTGTGACCAAACTGGATGACATCTACTGCAAGTACTTATTGCCCTACGATACTCTATCGCCAGCGGAACGCCAGAAGCTATTCGACGAGGTCGAAGCGGATTGGGCAAAGCGGGAGGCACGTGCCCGACGGAATGCTGATCGTTTTGTTAATTCAACGGAGAGCGTTTCAAACGTTGAGGATGATGTGTCCACCGATGAGGACGATGAGTCGGAGGAGGAGCTCGATGGTGTCTCAATGGAGTGCATTGTTAAGGGACGCAGCATGCCGCTTAGTCAATTCTATCGCATTGCTCGCAACACTATGGCGCTGTGGTTCAAGAGCACAGATCCCACCGTTAACGAAGTGGAGGCCGAATTTTGGCGTCATGTCGCCGTTCGTGACAGTCATGTGTGCGTGCATTCAGGCTCCATTGATAGCTCTGGTTGGGGCTATGGCTTTCCAAGTCCGGGTCCCAAAGGCAAGGGCTCCAACTATGCGCGACATCCGTGGAACCTAAAGGTGCTTACAAATAATTCAGGATCCGTTTTACGCTCGTTGGGACCTGTCATGGGCGTTACTGTGCCCACACTCCATGTGGGCATGCTCTTCTCTGCCTGCTGTTGGTATCGCGATCCGCATGGCCTTTCCTGGATCGAGTATTTGCATACGGGCGCCTCCAAGCTCTGGTATGGCATACCAGATGATCAGAGTGCCAATTTCCGATCTGCTCTAACATCGCTTATACCGACACACTGTCAGAACAAAACAATCTGGTTGCCCTGTGATACGGTGATGGTTCCACCACACATGCTCACCGATCGTGGCGTTTCATTGTGCCGCATCGAGCAGAAACCTGGCgagtttattgttgtttttccaCGTGCGTACACCTCTAGCTTAGCCACTGGTTATGTTGTGTCGGAGAGCGTATACTTTGCTACCAATTCATGGCTGGATTTGGCCAAGGATGACTTCAGGGACATCCATGAGAGCTGTGAGCCAGCCATGTTTTCCCTGGAGCAGTTGCTCTTTGCCTTGGGCTATGATCAACGCGTCAATTCGGATACACTGCATCAGATGCTGCCCATGCTGAACGACGTATGCGAAAAAGAGTCGGCGGCGCGTGAACAGCTTAGAgCCGCTGGTGTCACAGCAAGCGAAAAGGTACAAGCGGAAAAGGGTCAAAAGGCGaagaaacaacagcagccaccaCACAAGTCCATTGACAGCGAATGCGATCTGTGCCGCGCCAATCTGTACATATCGATGGTTCGCACCGAGGATGGCAATATCTATTGTTTGCAGcatgcattaaaaaatatcaacagcGGCAATGTGCAACCAAAAATGTGTAAACTGGTTTATGCGTACAATGTGGACGATGTGCAACAGCTTATACGCCAGCTGCAGGACAAGATTAATCAGATTCATCACAAAGCGGCCGTGAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETDTPPTSSAAAAAATLAVESSPEMPKRTKVQAQRKFAQGQSAPNAGGVGFNVGNVVAVAPGSSSSGPSTSTDSQQPPIEILPNQRPKPQDFLTFLCFRSFQGKPKANDAAPTSSDAVNNNTNKKNNSSSSKKKRGRPAKKSGAEQLQLQQQQQPPMPETNKIASDKIKSANSPATTTTTATSPPPASPLLLAGAVRKRAEVVAGGNRRGGRRQEALKRRSNRASGGTKDKDDEREEQEQAPQQQQEDNDGEDPVDEEDDEDEFFSAHDASSRNGGAADETLSKSETTQSNTRRSRGKKTGAAADSPAAVPENSAGKEKEKEKGPVKRFRQQRESPIFIPSPESSGRMTRQRAFFEPVKVPPKQDSDPEEQQVEDLKEKELKQEQERKQKASLEPKPQQIIKEKTNSSIYAKDAVRLENGVTTATAAAATDQQKSLNVFDFSSDDEQPLAKAIKLKKGGKKGAGAAGATAAVTANARGRKSAGGSAKKQQQQQREEEKAKATAAAPTVTVTPPCKSEEPSKAKRGKALKKKAESDNAGNNNAAVEEAEEERRHEPELSPPSPKKPTNNSNNNARPARRQAQLKVQQRSPSPGPQRSQRPSRKTKEAAAIYMGIIGHKLQMADDEDDDLSMDSFPDIPNVKQMEKMEKELKKNAAGKGSNAELKKTSIKPAATTTTTTTAAATTTTTEVAQGSGVADSRRLNAAAAVEQPTETSTTASVTPLAAPPVPAPRRGRPPKQAKGATGAGGAAAAIVKPQIEGMLVKKGALALAKAKSEQQQQLQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAGSTTAAAVTTTTITTITAKASSSKTETPTTTNVTSTTKTAFTITTATATVAPPTTTTATRSVAAPTAAAAAGAATLKPPQLSVATATPITPLTMLPLTTKPSPFSISPPSYASAAATLKAMEKKSPVPTSKILNVPATYALPGGGASSGLVVGLGVGAVGFGKSTSYLPQASPHYQSPYVRPPTFCAAAGAAAAIGNKTPHPQQQQQQLLATATTTTSQTSPLKYQTAPTIYPPPIEAYQCPKINPNFLTPKYDRASILPRVNNNNNAVTISNTSSNNFTAPIISRATLSSLTTPTTTVAAAAVKTTPTVSQSLSLSITSPTPAVASTSAAAAAAASATAIAQQQQQQLNQPHPQQQSPALTMTPTTSTNNNSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYFGDQLSGKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDEYDDSLRPQQSQTPPGPTRDDKESTSFSSSSKNTRVELGKSESAWSAKGPSLKATPVLVSTAAAAAANRRDVDTESDTMDFDKCVTPVNLTQKKDAAAALANDKRKPKNAVRASAATVAAAATASNNNKRGVTAANKRIAAATKMSTPTPTNSSSNTPTSATATTTTMTTTTTMPPKRTPIYQSPNKSKAQTQLDNKKQQHKLPAKTSVYAFGKDEEATATATKTAVAATKTTTATLAAGNKATATNRRRNAEVEATTAATPPQALSERSPTKKRAAATAAATAVQLTLSPTDKLEKPKAAAAAARKKQQQQQQQQQKQQQQKDQQQQKDQQQQKDQQQQKEQQQKEQQQKEQHKKEQQKKEQHLKEHQHKEQQKQQQLKKTAAAEAAAIAGGDSDADGATFYIPLRQGASSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSNKPMPDNELVKTLLNAANTNSEPSTPSNNSLKASTSAAAAAAGASAITSGSLVRVNSNSSLFSGSAKSRTAAASAAAANALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIRKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNVEDDVSTDEDDESEEELDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNDVCEKESAAREQLRAAGVTASEKVQAEKGQKAKKQQQPPHKSIDSECDLCRANLYISMVRTEDGNIYCLQHALKNINSGNVQPKMCKLVYAYNVDDVQQLIRQLQDKINQIHHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01321703; iTF_01320976; iTF_01327675; iTF_01320255;
90% Identity: -
80% Identity: -