Basic Information

Insect: Scaptomyza caliginosa
Gene Symbol: JARID2
Assembly: GCA_035044725.1
Location: JAWNNR010000146.1:843447-851707[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.9e-22 1.3e-18 67.1 0.0 6 89 1960 2041 1955 2041 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.9e-22	1.3e-18	67.1	0.0	6	89	1960	2041	1955	2041	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGTAAGGAAACAGATACGCCGCCAACGTCATCgtcagcggcggcggcggcaacacTGGCTGTGGAGTCATCACCTGAGATTCCTAAAAGAACGAAGGTGCAAGCACAGCGTAAATTTGCACAAGGACAAAGCGCGCCGAATGCCGGCGGTGCATTTGGTGTTGCAAGTATTGCAGCAATAGCACCAGGATCATCGTCATCGGGACCAAGCACGTCGACAGACAGCCAGCAGCCACCGATTGAGATATTGCCTAACCAGCGTCCGAAGCCGCAGGATTTCCTCACGTTTCTCTGCTTTCGAAGCTTTCAGGgcaagccaaaggcaaacgaTTCTGCCCCACCCAGCAGTGATgcagttaacaacaacaccaacaacaagaagtccagtagcagcagcagcaaaaagaaacgtGGCAGACCAGCCAAAAAATCTGGAGTTGAGCCAATGCCAGGAGCTCTAAAAACAGTTAGTGATAAAATTGAAGCAGCAAAGACGCCGGcaccaacgccaacgccgccTCCAGCACCAACAGTGCTGCTGGCTGGTGCAGTGCGTAAACGCGCTGAGGTGGTTGCCGAGGGCAATAGGCGAGGAGGGCGTCGTCAGGAGGCTTTAAAACGCCGTTCGAATCGCGCTTCAGGCAAAATGGAAAAGGATGATGAACCagaggaggaagaagaagcgttgcagcagcaggataATGATGACGAACACCCTCTCGAGGAGGAGGACGACGAGGATGAGTTCTTTTCGGCTCACGATGCCAGCTCACGCAATGGTGCCATCGCGGATgaatcaattttaaaatcgGAAACAACGCAAGCAAATACGAGGCGTGGTCGTGGCAAAAAAACAGCTTCAGCCGCCGATTCTCCAGCTGCAGTCACGGATATCAGTACTGgcaaggagaaggagaaaggGCCCGTGAAGCGGCTGCGGCAACAACGTGAATCACCAATTTTTATACCCTCACCTGAGTCCTCGGGCCGTATGACGCGACAGCGTGCTTTTTTTGAGCCAGTTAAGGTGCCGCCCAAGCAAGATCCCGACCCAGACgagcagcaggaggaggacCGTAAAGAAAAGGATAAGGAGCTTAAGAATGAACAGGAGCGCAAGCAGAAATTGTCACCAGACTCCAAGCCCCTGCAGCTCATCAAGGAGAAAACAAACTCTAGCATTTATGCCAAAGATGCGACAAAGCTTGAGAATGGCGTTATTACGGCGacagctgcggctgcagccGACCAACAGAAAAGCCTTAATGTCTTTGATTTCAGTTCCGATGATGAGCAACCGCTGGCCAAAGCCATCAAGTTAAAAAAAGGTGGCAAAAAGAGTGCCggaggagctggagcagctgcagtcGTAACGGCACGTGGACGCAAGCCAGCCGGCGGTTcggccaaaaagcaacaacaacagcagctgcagcaggaagATACAAAGGAAAAGTTAAAAGCAACACATGCAGCTGCCTCAGCAAAACTGACACCGCCTAGCAAATCCGAAGAATCCTTTAAAGGAAAGCGCGGCAAGGCATTGAAAAAGAAAGCTGAACTGGATACCAGCGGCGAAAATAACGCAGCGGAGGATTCGGAGTCGGAACACGAACCAGAGCTAAGTCCACCCTCACCCAAAAAGCCTacaaacaatagcaataatgcACGTCCAGCTCGACGACAAGTTCAACTTAAAATCCAGCAGCGTTCACCAAGCCCCGGTCCGCAGCGTAGCCAACGACCGTCgcgtaaaacaaaagaagcgGCTGCCATTTACATGGGCATTATTGGCCACAAACTGCAGATGgccgatgacgatgatgatgatctcTCGCTGGACAGCTTTCCCGACATACCCAACGTCAAGCAAATGGAGAAGATGGAGAaggagataaaaaaaaatgccgcTGGCAAAACAAGCAATGcagagttaaaaaaaacgtcaataaagccagcagcagcaacaacgacagcgacaacaacaaaagtaacaacagcaaccggcCAAGTGGCGGGAGCATCAGAAGTGGCAGGCGTAGGAAAATCAAACGCTGTAGCTGCAGTCGATCCACCGACTGAAACgcttgcagcaacagcagcagcaccgtcGCCCACGCCacctcctgctcctgctcctgctcctcgtCGTGGTCGACCGCCTAAGCAGGCAAAAGGTGCAACGGGAGCAGGAGGTGGAGCAGGtggtgcagctgcaacagtcAAGCCTCAGATAGAGGGTATGCTAGTTAAGAAAGGTGCACTGGCACTGGCCAAAGCAAAgtccgaacaacaacaacaacaacagcagcagcagcagcaacaacaacaacagcaaaaagtcgACTCCGATGCTGAGGAGGATTTTTTAATCAACGAGGAGctaaatgaaacgaaacgcaagCTGGAGAAAAGTTTTAGCGACTCGGATGATGAGCCTCTGGCCATAAAAGTGCCAACAGCTGGATcgacaatagcagcagcagcagcagcaacaactacaacaacaacaacaacaacaacaacaatttcagcTAAAgccagtaacagcaacaaaacagaaacaccatcaacaactgtgaaaccaacaacaacgacgacagcagcaacaattgctgctgcaacagtgacagcaacagtagcaccaacagcaacaacaactgccgcatcggcagcaacaacagttgcagcgaCTTTAAAGCCACCACAATTAAGCGCTACAACGGCCACGCCCATAACGCCCCTGACAATGCTACCCCTGACCACAAAGCCCTCACCATTTTCCATATCGCCACCTAGTTATGCATCCGCAGCAGCCACGCTAAAAGCAATGGAAAAGAAATCACCGGTGCCCACATCGAAGATACTTAATGTGCCTGCCACATATGCGCTGCCCGGTGCAGGCGTTAGCTCTGGACTGGGAGTTGGCATGGGAGTTAGTGCTGTAGGATTTGGCAAAAGTACATCGTATTTGCCGCAGGCATCGCCACACTATCAGTCGCCGTATGTGCGTCCGCCAAcgttttgtgctgctgctggcgctgctgctgccattggcaACAAGACGCCAcatccgcagcagcagcagcaacagcaacagttgctggcaacggcaacaacatcaCAGACATCATCACCACTTAAATATCAAACGGCGCCCACCATCTATCCGCCACCCATTGAGGCATATCAGTGTCCTAAGATAAATCCTAATTTTCTAACCCCAAAATACGATCGGGCCAGCATCTTGCCGCGtgtcaccaacaacaataatacggTAACCATAAGCAACACAAGCAGCACCAATTTTACGGCGCCAATAATTTCACGGCCAACGCTAAGTAGTCtgaccacgcccacaacagcagttgccactgcggcggcagcaaaaacaacgccATCAGTTACCCAAACTCTTAATCTGACTATAAcagcgtcatcgtcatcagcgGTAGCATCcacatcggcagcagcagcagcggcgtcggcagcagcggcagcaacagcaactgctgcacaacaacagcagcagcaaacacaacaacaacagcagcagcagcttaatcAACCACATCCACAACAGCAATCGCCAGCATTGACAATGACGCCCACAACCAGCACCAATAACAATTCGGATCCGCTCAAGGATGAAATCGGCAGCATTCTGGCACAGGCAACACTAATGCCCAGTAAGGAGGAGTCTGGCAAgatttttggcattgccagTGTGAGTTTGGCACAAAGTTCTGGACCGGACAACACCAAATGCACACTGGGCAAATGTGGTTCGATACACAAACCAGTTCTTGGTCCTGTCGTGCCCACCGAAGCCTACTTTGGTGATCAGCTGTCCGGTAAGGAACGTCGCAAAGCCAAGGTGAATATGACGCATGAGCAGATCCAAAAGTGGCTCATTGAGTGCAGCTCAAATCCAGACGAGATTCAGGATGATCTTGACGATGACTACGATGATAGCTTACGACCGCAGCAATCACAAACGCCGCCAGGACCGACGCGTGACGACAAGGAGAGCACCAGTTTTAGCAGCTCCTCAAAGAATACGCGCGGTGAGCTGGGTAAAAGCGAGAGTGCCTGGTCGGCAAAGGGACCATCGCTCAAGGCAACACCGGTGCTCGTGAGCAcagctgcggcggcggcaacagctgccgccAATCGCAGAGATGTGGATACAGAATCGGACACCATGGACTTTGATAAATGTGTAACACCCGTCAATCTTACGCAGAAAAAGGAGACGGATGCCGCTGGTGCCAATGATAAGCGAAAGCCCAAGGCTGCAGTAagagcatcagcagcaacacctcatgctgcagcgacagcgagcaacaacaacaaacgcggAGCAACTGCTGCCAATAAACGTATTGCATcggcagctgccacaaagcTTTCAACGCCCACGCctaccaacagcagcagcaatacaccaacatcagcaacggcaacaacaacatcgatgacaacaacaacaacaacgccagcaaaaCGTACGCCCATCTATCAAAGTCCAAGCAAGAGCAAAGCACAAACTCAACTGGacaacaagaagcagcaacaacatcagcatcagcagcagcagcagcacaagatGCCTACAAAAACTTCAATTTATGCATTCGGCAAGGATGAGGACACAACtaaaacgacaacagcagctgctgcaactaaagcaacaacgcCAATTGTTGCTccaagcaacaaagcaacagcagcgaatcGTCGTCGCAATGCCGAAGTTGAAGCAACAACGCCGCCGCCAGCGCTTAGCGAACGTTCTCCAACTAAAAAACGTGCAGCAGctacagcggcagcaacagcagtgcaGCTGACACTTAGTCCCACGGATAAGCTGGAGAAGccgaaggcagcagcagcagcagctcgcaaaaaacagcaacaacagcaacagcagcagcaaaaacaacagcagcagcagaaggagcaacagcaaaaagagcagcagcagaaagaggagaagcagcagcagaaagagGAGAAGCAGAAAgaggagaagcagcagcagcagcagcagcagcagaaaaagtCATCTGAAGCAGCTGCCATCACTGGTGGAGATTCAGATGCAGATGGTGCCACGTTCTATATACCGTTGCGTCAGGGAGCCAGCAGCGGTGATGGTGGCATACAGGGTGTTGCTGTTAAGCTAGGTCGCGAGGGACCCGATGGACCCAATCAAAAGGTAGTGATGCAAGCAACGCTTGTGACCAAGGCACAAATGGACACCAACTCGAATAAGCCAATGCCCGACAATGAGCTGGTCAAAACGTTGCTGAACGCGGCTAACACAACAAACAGTGAACCATCGACGCCCAGCAATAATAGTTTAAAAGCCAgcacttcagcagcagcagcagcagcagttgtaggtacaggaggaggaggagcagcagcagcaaccacctCCGGAAGTCTAGTCCGTGTCAATTCGAATTCATCGCTATTTTCTGGATCAGCTAAATCGcgtacagcagcagcttcggcagcggcagcggcagcaactgccatagccaaaaaatacaaagatgATACACCCATTAAGATGGCCAATAATACGGCTTTTCCGCGGCACGATGATCCCACACAAATGGTGGAGGCGCCTATCTTCAAACCCACCGAAAAGGAGTTCGCTGATCCCATAGAGTTTATTGAGCGCATAACACCAATTGCTGCTCGATTTGGCATCTGTAAGATTATACCGCCTGCTAGCTTTAAGCCGGAATGTCGCATCTCGGATGAGATGCGTTTCACGGCATACAATCAATATGTGCACAAGATGCTGCATCGCTGGGGTCCCAGTGCCAAGGAGCTGAGTGCAATCAAAAAGTATTTAGCCACACAAAGCATTGTGATGAACCATGCGCCCTGGATTGGCGGCATGGAAGTGGATCTGCCTCGTTTATATCACACAGTACAGGAACTCGGTGGCCTCAAAGAGGTGATCGAGAAAAAGAAATGGGCTCGAGTGGCTGAAGAGATGTGTATACCGAAGCTGGCGCAGGATCGTGTGACTAAACTGGATGACATCTACTGCAAGTACTTGTTACCCTATGATACTCTATCGCCAGCAGAACGGCAAAAGCTCTTCGATGAAGTTGAGGCGGATTGGGCTAAGCGGGAGGCACGTGCCCGTCGAAATGCTGATCGGTTTGTCAACTCAACGGAGAGCGTTTCAAACGTGGAGGATGACGTGTCCACTGATGAGGACGATGAGTCGGAGGAGGAGCTTGATGGTGTCTCCATGGAGTGCATTGTCAAGGGTCGCAGTATGCCGCTGAGTCAGTTCTATCGCATTGCTCGCAACACAATGGCACTGTGGTTTAAGAGCACAGATCCCACCGTTAACGAAGTGGAGGCCGAGTTCTGGCGCCATGTTGCCGTTCGTGACAGTCATGTGTGCGTGCATTCGGGCTCCATTGATAGCTCTGGCTGGGGTTATGGGTTTCCCAGTCCAGGTCCGAAAGGCAAGGGCTCAAACTATGCGCGACATCCGTGGAACCTTAAAGTGCTGACAAATAACTCGGGCTCTGTTCTACGCTCGCTGGGACCAGTGATGGGCGTCACAGTGCCCACACTCCATGTGGGCATGCTTTTCTCCGCCTGCTGCTGGTATCGTGATCCACATGGCCTCTCCTGGATCGAGTATTTGCATACCGGTGCCTCCAAGCTCTGGTATGGCATACCCGATGATCAAAGTGCCAATTTTCGTTCGGCTTTAACATCGCTAATACCGACACATTGTCAAAACAAGACAATCTGGTTGCCCTGTGATACGGTGATGGTTCCACCGCACATGCTTACCGATCGTGGCGTGTCGCTGTGCCGCATCGAGCAAAAACCTGGCgagtttattgttgtttttccgcGCGCCTACACCTCTAGCTTAGCCACCGGTTATGTTGTCTCGGAGAGCGTATATTTTGCTACCAATTCGTGGCTGGATTTGGCCAAAGATGACTTTAGGGACATCCATGAGAGCTGTGAGCCAGCTATGTTCTCGTTGGAGCAGCTGCTCTTTGCCCTGGGCTACGATCAGCGCGTCAGCTCAGATACACTGCATCAAATGTTGCCCATGCTAAATGATGTATGCGAAAAAGAATCGGCGGCACGTGAGCAGCTTAGAGCCGCTGGTGTCACAGCTAGCGAGAAAGTACAAGCGGAAAAGGGTCAAAAGAcgaaaaagcaacagcagccaccgCACAAATCCATTGACAGCGAATGTGATCTGTGTCGAGCCAATCTGTATATATCGATGGTGCGCACTGATGATGGCAACATTTACTGTTTGCAGCATGctttgaaaaatattaacagTGGCAATGTGCAACCCAAAGTGTGCAAACTGGTTTATGCGTACAATGTGGACGATGTGCAGCAGCTGATACGCCAGCTGCAGGAAAAGATTAATCAAATTCATCACAAGGCGGCTGTGAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETDTPPTSSSAAAAATLAVESSPEIPKRTKVQAQRKFAQGQSAPNAGGAFGVASIAAIAPGSSSSGPSTSTDSQQPPIEILPNQRPKPQDFLTFLCFRSFQGKPKANDSAPPSSDAVNNNTNNKKSSSSSSKKKRGRPAKKSGVEPMPGALKTVSDKIEAAKTPAPTPTPPPAPTVLLAGAVRKRAEVVAEGNRRGGRRQEALKRRSNRASGKMEKDDEPEEEEEALQQQDNDDEHPLEEEDDEDEFFSAHDASSRNGAIADESILKSETTQANTRRGRGKKTASAADSPAAVTDISTGKEKEKGPVKRLRQQRESPIFIPSPESSGRMTRQRAFFEPVKVPPKQDPDPDEQQEEDRKEKDKELKNEQERKQKLSPDSKPLQLIKEKTNSSIYAKDATKLENGVITATAAAAADQQKSLNVFDFSSDDEQPLAKAIKLKKGGKKSAGGAGAAAVVTARGRKPAGGSAKKQQQQQLQQEDTKEKLKATHAAASAKLTPPSKSEESFKGKRGKALKKKAELDTSGENNAAEDSESEHEPELSPPSPKKPTNNSNNARPARRQVQLKIQQRSPSPGPQRSQRPSRKTKEAAAIYMGIIGHKLQMADDDDDDLSLDSFPDIPNVKQMEKMEKEIKKNAAGKTSNAELKKTSIKPAAATTTATTTKVTTATGQVAGASEVAGVGKSNAVAAVDPPTETLAATAAAPSPTPPPAPAPAPRRGRPPKQAKGATGAGGGAGGAAATVKPQIEGMLVKKGALALAKAKSEQQQQQQQQQQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAGSTIAAAAAATTTTTTTTTTTISAKASNSNKTETPSTTVKPTTTTTAATIAAATVTATVAPTATTTAASAATTVAATLKPPQLSATTATPITPLTMLPLTTKPSPFSISPPSYASAAATLKAMEKKSPVPTSKILNVPATYALPGAGVSSGLGVGMGVSAVGFGKSTSYLPQASPHYQSPYVRPPTFCAAAGAAAAIGNKTPHPQQQQQQQQLLATATTSQTSSPLKYQTAPTIYPPPIEAYQCPKINPNFLTPKYDRASILPRVTNNNNTVTISNTSSTNFTAPIISRPTLSSLTTPTTAVATAAAAKTTPSVTQTLNLTITASSSSAVASTSAAAAAASAAAAATATAAQQQQQQTQQQQQQQLNQPHPQQQSPALTMTPTTSTNNNSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYFGDQLSGKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDYDDSLRPQQSQTPPGPTRDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSTAAAAATAAANRRDVDTESDTMDFDKCVTPVNLTQKKETDAAGANDKRKPKAAVRASAATPHAAATASNNNKRGATAANKRIASAAATKLSTPTPTNSSSNTPTSATATTTSMTTTTTTPAKRTPIYQSPSKSKAQTQLDNKKQQQHQHQQQQQHKMPTKTSIYAFGKDEDTTKTTTAAAATKATTPIVAPSNKATAANRRRNAEVEATTPPPALSERSPTKKRAAATAAATAVQLTLSPTDKLEKPKAAAAAARKKQQQQQQQQQKQQQQQKEQQQKEQQQKEEKQQQKEEKQKEEKQQQQQQQQKKSSEAAAITGGDSDADGATFYIPLRQGASSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSNKPMPDNELVKTLLNAANTTNSEPSTPSNNSLKASTSAAAAAAVVGTGGGGAAAATTSGSLVRVNSNSSLFSGSAKSRTAAASAAAAAATAIAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNVEDDVSTDEDDESEEELDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVSSDTLHQMLPMLNDVCEKESAAREQLRAAGVTASEKVQAEKGQKTKKQQQPPHKSIDSECDLCRANLYISMVRTDDGNIYCLQHALKNINSGNVQPKVCKLVYAYNVDDVQQLIRQLQEKINQIHHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01326177;
90% Identity: -
80% Identity: -