Spol010919.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza polygonia
Gene Symbol
dl
Assembly
GCA_035044585.1
Location
JAWNNU010001292.1:407797-411010[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8 8.3e+03 -2.8 0.7 142 155 31 44 9 56 0.45
2 2 4.1e-74 1.9e-70 236.8 0.0 1 169 61 231 61 231 0.99

Sequence Information

Coding Sequence
ATGtttccaaatcaaaataatttgGCGACAGCAGCTGGAGCAGGCGatgcccaacaacaacaaaacctcAACTACAATGgcctgcaacaacagcaacagcaacaacaacagcagcaacaacagcagcaaactcAACAGTTAACACAAACGGCAGCCAAGAATGTACGAAAGAAACCTTATGTTAAGATAACAGAGCAGCCAGCTGGTAAAGCGTTGCGTTTTCGCTATGAGTGCGAGGGTCGCTCGGCTGGTTCCATACCCGGCGTCAATTCAACGCCCGAGAACAAAACCTATCCGACAATCGAGATTGTGGGTTACAAGGGACGCGCCGTTGTTGTCGTTTCCTGTGTCACCAAGGATACGCCATATCGTCCACATCCCCATAATCTGGTTGGCAAGGAGGGCTGCAAGAAGGGCGTCTGTACGCTAGAGATAAGCAGCGAGACAATGCGAGCCGTGTTTAGTAATCTGGGCATTCAATGTGTCAAGAAGAAGGACATTGAGGCGGCGCTTAAAGCTCGAGAAGAGATACGCGTGGATCCATTTAAAACTGGATTCTCGCATCGTTTTCAACCGTCGAGCATTGACTTGAACTCGGTGCGTTTGTGCTTTCAAGTATTTATGGAGAGTGAGCAAAAGGGGCGGTTTACATCGCCACTACCGCCGGTCGTCTCCGAGCCAATTTTTGACAAGAAAGCCATGTCGGATCTGGTCATCTGTCGGCTGTGCAGCTGCTCGGCCAGTGTGCTGGGTAACACCCAGATAATATTGCTGTGCGAAAAGGTTGCCAAAGAGGACATTACGGTACGCTTCTTCGAGGAGAAGAACGGCCAGACATCCTGGGAGGCATTAGGTGACTTTCAGCATACAGATGTGCACAAGCAGACGGCCATTACGTTCAAAACTCCGCGCTATCATTCGCTGGAGATAACGGAGCCTGCCAagGTTTTAATACAGCTGCGACGACCATCGGACGGTGTTACCAGCGAGGCTCTACCCTTTGAATATGTGCCATTGGATTCAGGTAGGCATACGTTTTGGAATCTTCATCGGCATCTCAAGCGGAAGCCCGATGAAGACATCTTTAAGCAAATTCTGTCGATCGACTCGGGTCGAGCCGCCAAGCGCGAAACGCCAACGATTGAGGTTATTGATCTAAATACACCCATTTTGGAGCAGCCGGAACCGATAATGCTCCATGTGCCACCGGCAGCGGCAGAAACAGTTGACATTACAGATCAAGCGCCGCAAGATATGGAAGCAGCTAATGCTGCTGCCGAAGCTGAGACAGAAGCAGATAGGTTGCGTACTGAACTTGAAATCGATTCAATTATCGATCAAAAGGTGCGTGAAATGGAACAACTGCAATTGGAGCAACAGATGGAACAACCGATAGAGCAACCCATAGAGCAACCGATAGAGGAACAGTTGGCGGCTCCAGAACCGCATCCACTTACAGCTAACGATAAGATCAACGAGTGGATGAAGTCCAAtgagctgcaacagcaacctGAACACGAGCCAAGTCCCGGTGTTGTTGAAGCCGAGGCGGAAGACAACAGTGATGCCACTGAGGCAACTGTGGAGACTCAAGTGGCTGCTGCCACAGATGAGGATAAAACGCTTAACGAGCTGCTCGAACAGGTGGCTGAGCTGGATGAGATTTATACGGACTTTGTTATGCAACGCGACACGTACAACAACACACTGCAAAATGAGTTGCACAGCATGGATCGGCCACCGATGCACGTTGACGACAGCTTCGATGATGCAGCCACTTATTCGAGTTTGCAGATAGCATTTAAGAACCCAATACTGATGACAATGGACGATATAATGCCACCAACGCCACCCATGTCTCAGTGTGCCCCCGAAGATGCACAACACTACGATCCTGTCGATGTGAactcgcagcagcagcagcagcggcagcagcgtCAGCTACACGAAATCATTAGGAATCACGAGCAAGAACAGCTGGATCTGCAGGAGGTTGCCTTTCTATTATCATCGGACGATGAAAAAGTGCCACCGCTGCCTCCGAAGCGATTGCGTAAACAGGACAGCAATGCCGAGAATCGGTCAATCGATGCAAACAGCGTGGACGCCGAACCGCCACCAGTTCGTGAGAAGCCACGTCTGCCGCCACCTATTATACATCCGAGAATGGCCGATTTGCCGGCGGCGCCAACAAAACGCTTGCCTCAGCCACCGGAAACAAAGCCCAAGCCCAAGCCGAAGCAAAAACCCGAAAAGAATCCAAACTTTAATACGCTGCCGCGTCAAAAGAAACCTGGCTTTTTATCCAAGCTTTTCTCGCGTCGCAAAAGCAAACCAGAGCTAATGGACGATCAGAGCAATGAGAACTGTTCGCGTCTTGGCTCCAAGGCAGCCAGTGCATCGGCAAGTCGAGAGACCAGCATGGATAACCTAATCATGCGCGAACCGATGCGAGCCTCACAGCGCCGATTGGGTCCTTTAAAGGCCGGTGGCGCAGCTGGGGCGGCAGCGTCCCGAAAGTCTGGCAAGATGGCCAAGCCCTGTGGACGCAGTGTTAGCAGTGTGTCGGGCAAACGACCCTCGTATTTAAATGCCGATGTAGTGCACATACCATTGAAGGGCGAGAGTTCGAGCAGCTTACAGCAGGCGCCGCATAATGAATCATATTCAAAGGCCAGCACAATAACGGTGGGCGGTCAGCTGGATAGACGGACGGCATCGGCACTGCAGCTAGCCGAGATACCAATTATTGATGGTGGCATGGAGCTGGTGGCCATTGCCGATCGTCAGAGTCTGCACAATTTAGTCAGCTCGATTGAGGCGCACTTCAATGTGCAAATCGATCCCAATCTAGATCTAACTGAAGTCGAGCATTTTGCGCTCTACACAAGTGTGCCGCCACAGGCGACTGCCAGCGAATTCGATGAGACATCTGCCTACTATGCACCGGTCGATGCTGGCGAGATTCTGACACCCGATCAGGTTGCCAGACGTCTGGAGGCAGCCAataatataatcaaaaattaa
Protein Sequence
MFPNQNNLATAAGAGDAQQQQNLNYNGLQQQQQQQQQQQQQQQTQQLTQTAAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTSWEALGDFQHTDVHKQTAITFKTPRYHSLEITEPAKVLIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFKQILSIDSGRAAKRETPTIEVIDLNTPILEQPEPIMLHVPPAAAETVDITDQAPQDMEAANAAAEAETEADRLRTELEIDSIIDQKVREMEQLQLEQQMEQPIEQPIEQPIEEQLAAPEPHPLTANDKINEWMKSNELQQQPEHEPSPGVVEAEAEDNSDATEATVETQVAAATDEDKTLNELLEQVAELDEIYTDFVMQRDTYNNTLQNELHSMDRPPMHVDDSFDDAATYSSLQIAFKNPILMTMDDIMPPTPPMSQCAPEDAQHYDPVDVNSQQQQQRQQRQLHEIIRNHEQEQLDLQEVAFLLSSDDEKVPPLPPKRLRKQDSNAENRSIDANSVDAEPPPVREKPRLPPPIIHPRMADLPAAPTKRLPQPPETKPKPKPKQKPEKNPNFNTLPRQKKPGFLSKLFSRRKSKPELMDDQSNENCSRLGSKAASASASRETSMDNLIMREPMRASQRRLGPLKAGGAAGAAASRKSGKMAKPCGRSVSSVSGKRPSYLNADVVHIPLKGESSSSLQQAPHNESYSKASTITVGGQLDRRTASALQLAEIPIIDGGMELVAIADRQSLHNLVSSIEAHFNVQIDPNLDLTEVEHFALYTSVPPQATASEFDETSAYYAPVDAGEILTPDQVARRLEAANNIIKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530040;
90% Identity
iTF_01322412;
80% Identity
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