Spol023170.1
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- Ubp1
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010002134.1:716473-730592[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-52 9.6e-49 166.3 0.5 19 189 404 571 386 584 0.89 2 2 3e-13 2.7e-09 37.2 0.6 188 222 633 667 624 668 0.91
Sequence Information
- Coding Sequence
- ATGGCGCTTACGTTTTTATCGCAAACTTCCGGCCTGTTGGATTTACAAAGCATATTTGATCCACAATAttcattacaacaacaacaacatcaaccaCAACAGCATAAACAATTGCAACATCATTTACaatcgcaacaacaacaacaacagcaaacaccACGCATTTCAACGAAATTCGACTTAAGCATTTTTAACGATTTTGACCAAATGGAATTCAATAACAATCTGAATCGCAATCATAATCagtatcaaaataataataataacatcaacaacaacaaccacaataacaataacaacaacattcataCGCACCTGACAAACGGTGAAAATCTTAACCAGGTCCAAAATCGTCATTTCATCAGCGGctatcatcatcagcatattGGATCGGATTTTGAGCAAGTCATAAACTTTGTTGACTCACCACCAAACTCTGAGGAATCTTGGACAGACGCACAGTCGAAAGATTCGCCTGGAACGCAAATAATCGACGTACGGACAATTTACTCAGACAGTGGATCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGTCAAAGTGAAAATTCGCCAACACAACAATCCGGCGACATACCCAATAAAGTGGCACAtcaagagaaagagaaacacAAACGTGAAAAGCATTCGGGTCGCAGTAGCTGGAGCGACGATATTGGATTTGATTTAAACGCCGAGTTTAATAGCAACTCATATTTGAACAATGAAAACTTTTTATCGTTCTCGCCGAGCCTGACGGCACTGAAACAGGAGCCGCAAACGGAGCAGCTCAAGCCGAATAATACAAAGCTATCCTTAGAAAATAGCTCTGCAGTTGCAGTGGGAAATATTGGAAAGATTGACAAATCAGCTTTAAGCGACTCCAATCATTCGGGACAATCACACGAAGCGGGTAGCCACGCAGTAGCAGGAACAGGCCCAGCTAgtgccagcaacaacagggTTGACAGTGGAAAGCATGAGTTGAAAGCCGGCATAATTTGCGGATGTGGCTCGCCGCAAGGCTCTTCATCCGCAACGGAATTTGAACTGAATGGCAATGGTAATGCTAATGGTAATGCAGCTTCAGCTGATAAACACAAAGCTGCATCGGGCAACGAGGCTTGTGCACAGGCGTCTCGCTCTggactgcagcagcagctgagcGTTGTTGAGACGACGGCCAATATTGAGCCGAGCTCGTCCAGTGGTGCCCCACATGGAGAGGATCACAAatTTCAGTACATTTTAGCTGCGGCCACATCGATTGCGACGAAGAACAATGAGGAGACTTTGACCTATCTAAATCAGGGTCAAAGCTATGAGATCAAATTGAAGAAAATTGGTGATTTGTCTTTCTATCGTGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGCCGATTGCAGTTCATGGAACGCGAACAGATGCAACAATGGCAAGCGTCGCGTCCTGGTGATCGCATCATTGAAGTAGATGTGCCATTATCCTATGGACTGTGCCATGTCTCGCAGCCATTGAGCTCGAGTGCTTTGAACACTGTGGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTATGTCAAGGTCAATTGCATTTCAACAGAGTTTACACCAAAGAAACACGGTGGTGAAAAGGGTGTACCATTTCGACTACAAATTGAAACCTATATAGAAAATTCAAAtacagcaaatgcaaatagcagcaacagcagttcaagcagcagcaccagcaccagcagcaccaCTGCcactggcaacaacaacagcaacaacaacattacaCCAGCAGGCACATCGCCAGGCGCATCAGATAATCGTGCAGCCAATGAAAAATGCGGCACCGGCGCCATTTCCGGCCTAGCTGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAAgtttttaaacttaaaggcGCCGATCGCAAGCATAAACAGGATCGCGAAAAGATACAGAAGCGTCCCCAATCGGAGCAGGAGAAATTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGATagcgccagcaacaacaactggctgCTATAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGGATGCTACCATTTGCAAGCAGTGCATCACCAGCGGCCAGCAGCAGCCCCATTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCAGCATGTGCCAGCGGATATGGATGATTATAATCAGAACATAATGCCAGACTCGACACCAGCACAAGTGACACAATGGCTGACCAATCATCGTCTGACCGCCTATCTCACTACATTTGCCCATTTCTCGGGATCGGATATTATGCGCATGTCCAAGGAGGATCTAATACAAATCTGTGGACTTGCCGATGGCATACGTATGTTCAATATTTTGCGAGCCAAaacaATTGCGCCACGTTTGACGCTCTATGCCAGCATTGATGGCTGCAGCTACAACGCCGTTTACTTACTCTCCAGCACGGCCAAGGAGttgcagcaaaagctttgcaaGTTGCCCGGCATCTATGAGTTGTTGGCTAAGGGCGGTGCTGCAAGCTCAGTAGAGAATGGCggtgttgcagctgcagctgctgcgcTCTACAACAATTGGAGCATGCATTCAAAGTACTCGGGCAGCGGCTCAAACATTTTCAATGATGTTACCAAGTGTTGCGTTTATATATCGGGTCCGTCGGGAATTCTTGTCAGCGTAACCGACGAGGTGCTCAACAATGAGATTAAGGACGGAAGTCTCTATGCTTTGGATGTGCAGGGCGGCaaagttattttaaaattgatcaATAAGCAGgacacaatttaa
- Protein Sequence
- MALTFLSQTSGLLDLQSIFDPQYSLQQQQHQPQQHKQLQHHLQSQQQQQQQTPRISTKFDLSIFNDFDQMEFNNNLNRNHNQYQNNNNNINNNNHNNNNNNIHTHLTNGENLNQVQNRHFISGYHHQHIGSDFEQVINFVDSPPNSEESWTDAQSKDSPGTQIIDVRTIYSDSGSRKRRMDWDSLDIGQSENSPTQQSGDIPNKVAHQEKEKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNNTKLSLENSSAVAVGNIGKIDKSALSDSNHSGQSHEAGSHAVAGTGPASASNNRVDSGKHELKAGIICGCGSPQGSSSATEFELNGNGNANGNAASADKHKAASGNEACAQASRSGLQQQLSVVETTANIEPSSSSGAPHGEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSSALNTVEIFWDPLKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSNTANANSSNSSSSSSTSTSSTTATGNNNSNNNITPAGTSPGASDNRAANEKCGTGAISGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLIAPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPDSTPAQVTQWLTNHRLTAYLTTFAHFSGSDIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASIDGCSYNAVYLLSSTAKELQQKLCKLPGIYELLAKGGAASSVENGGVAAAAAALYNNWSMHSKYSGSGSNIFNDVTKCCVYISGPSGILVSVTDEVLNNEIKDGSLYALDVQGGKVILKLINKQDTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322406;
- 90% Identity
- iTF_01321679;
- 80% Identity
- -