Sgra000164.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- TFCP2
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000016.1:830323-843839[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-52 3e-48 163.8 0.1 22 183 415 573 395 582 0.90 2 2 2.2e-13 1.7e-09 37.1 0.7 188 222 641 675 633 676 0.91
Sequence Information
- Coding Sequence
- ATGGCGCTTTCGTTTTTATCGCAAACTTCCGGCCTGTTGGATTTACAAAGCATATTTGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACATCACGCATTTCATCGAAATTTGATTTAAGCATTTTTAACGATTTTGACCAAATGGAATTCAATACAAATCTGAATCGAAACCATAATCAGCAGTATCAGAATAATAATAACAACAACAACAACCACAATAACAATAACAACATCATTCATACGCACCAGACAACAGGGGAAAATCTTAATCAGGTCCAAAATCGTCATTTCATTAGCGGCTATCATCATCAGCATATTGGATCGGATTTTGAGCAAGTCATAAACTTTGTTGATTCACCACCGAACTCTGAGGAATCTTGGACAGACGCACAGTCGAAAGATTCGCCTGGACCGCAAATTATCGACGTACGGACAATTTACACAGACAGTGGATCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGTCAAAGTGAAAATTCGCCAACACAACAATCGGGCGACATACCCAATAAAGTGGCACATCAAGAAAAAGATAAACACAAACGTGAAAAGCATTCGGGTCGCAGTAGCTGGAGCGACGACATTGGATTTGATTTAAACGCCGAGTTTAATAGCAACTCATATTTGAACAATGAAAGCTTTTTATCGTTTTCGCCGAGCCTGACGGCACTGAAACAGGAGCCGCAAACCGAGCAGCTCAAACCGAGTACAAAGCTATCCCTGGAAAATAGCTCTGCAATTGCACTGGGCAATATTGGCAAGATTGACAAATCAGCTTTAAGCGACGTCAATCATTCACCACAGCGCTCGGGACAATCACACGAAGCGGGTGAAGCAGTAGCAGTAGCAGGAACAGGAGCAGCTGGTGGCTGCAACAGGGGTGACAGTGGAAAGCATGAGTTGAAAGCCGGCATTATTTGCGGATGTGGCTCGCCGCAAGGCTCTCCATCCGCAACGGAATTTGAACTGAATGGCAATGCTAATGGAAATGCAGCTTCAGCTGATAAACCCAAAACTGCATCGGGCAACGAGGCTTGCGCACAGGCGTCACGTTCTGGACTGCAGCAGCAGCTGAGCGTTGTCGAGACGTCCAATATTGAGCTGAGCTCGCCCAGTGGTGCCCCACATGCAGAGGATCACAAATTTCAGTACATTTTGGCTGCGGCCACCTCAATTGCTACAAAGAACAATGAGGAGACTTTGACCTATCTAAATCAGGGTCAAAGCTATGAGATCAAATTGAAGAAAATTGGTGATTTATCTTTCTATCGCGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGCCGATTGCAGTTCATGGAACGAGAACAGATGCAACAATGGCAAGCATCGCGTCCTGGGGATCGCATCATTGAGGTAGATGTACCATTGTCATATGGCTTGTGCCATGTCTCGCAGCCATTGAGTTCGAATGCATTGAACACTGTGGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTATGTCAAGGTCAATTGCATTTCAACAGAGTTTACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGACTACAAATTGAAACATTTATAGAAAATTCAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATACACATGCAGGCACATCGCCAGGCGCATTAGATAATCGAACAGCCACTGAAAAAGCCAGCAGCGGCTCCATTTCTGGCCTAGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAAGTCTTTAAACTTAAAGGCGCCGATCGCAAGCATAAACAGGATCGCGAAAAGATACAGAAGCGTCCCCAATCAGAGCAGGAGAAATTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGATAGCGCCAGCAACCACAACTGGTTGCTACAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGGATGCTACCATTTGTACCAGCGGCCAGCAGCAGCAGCCCCATTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAACATGGTATCGCCGCAGCATGTGCCAGCGGATATGGATGATTATAATCAGAACATTATGCCAGACTCAACGCCAGCACAAGTGACACAATGGCTGACCAATCATCGTCTGACAGCATATCTCACCACGTTTGCCCATTTCTCTGGAGCGGACATTATGCGCATGTCCAAGGAGGATCTAATACAAATCTGTGGACTTGCCGATGGCATTCGTATGTTCAATATTTTGCGCGCCAAATCCATTGCGCCACGTTTGACGCTCTATGCCAGCATTGATGGCTGCAGCTACAACGCCATTTACTTGCTATCCAACACGGCCAAGGAGTTGCAGCAAAAGCTATACAAGTTGCCAGGCATCTACGAGTTGATGGCTAAGGGCGGTGCTGCAAGCGGAGCAGAGAATGGCGGTGTTGCAGCTGCAGCTGCTACGCTCTACAACAATTGGAGCATGCATTCAAAGTACTCGGGCAGCAGCTCAAACCTTTTTAATGATGTTACCAAGTGTTGCGTCTATATTTCGGGACCGTCGGGAATTCTTGTCAGCGTCACCGACGAGGTGCTTAACAATGAGATCAAGGATGGCAGTCTCTATGCAATGGACGTGCAGGGCGGCAAATTGGTTTTAAAATTGATCAATAAGCAGGACAACATTTAA
- Protein Sequence
- MALSFLSQTSGLLDLQSIFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRISSKFDLSIFNDFDQMEFNTNLNRNHNQQYQNNNNNNNNHNNNNNIIHTHQTTGENLNQVQNRHFISGYHHQHIGSDFEQVINFVDSPPNSEESWTDAQSKDSPGPQIIDVRTIYTDSGSRKRRMDWDSLDIGQSENSPTQQSGDIPNKVAHQEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNESFLSFSPSLTALKQEPQTEQLKPSTKLSLENSSAIALGNIGKIDKSALSDVNHSPQRSGQSHEAGEAVAVAGTGAAGGCNRGDSGKHELKAGIICGCGSPQGSPSATEFELNGNANGNAASADKPKTASGNEACAQASRSGLQQQLSVVETSNIELSSPSGAPHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSNALNTVEIFWDPLKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETFIENSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTHAGTSPGALDNRTATEKASSGSISGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLIAPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFVPAASSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPDSTPAQVTQWLTNHRLTAYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKSIAPRLTLYASIDGCSYNAIYLLSNTAKELQQKLYKLPGIYELMAKGGAASGAENGGVAAAAATLYNNWSMHSKYSGSSSNLFNDVTKCCVYISGPSGILVSVTDEVLNNEIKDGSLYAMDVQGGKLVLKLINKQDNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323875; iTF_01321679; iTF_00495625; iTF_01326156; iTF_01324665;
- 90% Identity
- -
- 80% Identity
- -