Basic Information

Insect: Scaptomyza parva
Gene Symbol: Hr39
Assembly: GCA_035044645.1
Location: JAWNNT010000063.1:2067646-2070693[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.91 5.3e+03 -3.6 12.9 32 203 35 226 25 231 0.55

2 3 3 1.7e+04 -8.9 20.4 38 157 205 319 185 365 0.35

3 3 1.3e-99 7.4e-96 322.0 14.1 1 408 505 902 505 902 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.91	5.3e+03	-3.6	12.9	32	203	35	226	25	231	0.55
2	3	3	1.7e+04	-8.9	20.4	38	157	205	319	185	365	0.35
3	3	1.3e-99	7.4e-96	322.0	14.1	1	408	505	902	505	902	0.87

Sequence Information

Coding Sequence: ATGCCAAATATGTCGAGTATTAAGACGGAGCAGAGTGTTTCACCCGGTGCCAGTGGCGGTGTCAGCGGCAGTTATCAGCTGCCCGTTAACATgtccacaacaacagcaacaataacaacaacggcgacaacaatatcgcaacaccagcagcaacaccaacagcaacaacaacgtcacaATGTCTCCGTGACGAATATCAAATGTGAATTGGATGAACTGGCAACGCCAACGAATGGCAATTTGGTGCCGGTCATAGCCAActacaacaatcacaacaaccaCCACAATAATCACAATCATAGTGTAGGCGGAGgcggaggtggaggtggaggtagTCTGCGCATCCCACTGGGTCACAATGAAGatgattcggattcggatgcCGAGTTGGCCCACATTGAGAATCTAAAGGTACGAAGGCGAGCAGCCGACAAGAATGGTCCTCGACCCATGTCCTGGGAGGGTGAGCTCAGCGAGAACGAAACAAATGGCGGCGCCGATGAGGAGGAGCTCATGGAAACGGAAACGGTGATCAAGAGTGAGGTGACAagtagcagcaatagcagcagcagtcaggtGAATGCCATGTTGCAACCGATTAAAACTGAACTGGAGCACATAGCTGGTgagatgcaacaacaacaactgcagcagcagcagcagcagcaacaacagcagcaacaacaactgcagcaattgcaacagctgcagcaaccgCAACAATTGCTGCCACTAAAGCACAAACTGAAATTGGCGCCAACACAAAGTGATCCCATCAATTTGAAGTATgaacccacaacaacaacaacaacgacaacatcgTTACTCTGCGATCGCAGTAAATCCAACAGTGGTGGCCATTTGCCACTGCTGCCCGCCAATCCAAGTCCCGATTCTGCCATACATTCCGTCTATACGCACAGCAGCCCCTCCCAGTCGCCGCTGACGTCACGCCACGCCCCCTACACGCCGTCGCTGAGTAGAAACAACAGCGATGCCTCGCATAGTAGCTGCTATAGCTACAGCTCCGAGTTCAGTCCCACCCACTCACCCATACAGGCACGCCATGCCCCACCAGCCGGTGTGGCAGCTCTGTTTCCGGGCAATGCTGCCAATGGTGGCGGAGGGGGCAATGGTGCACTGCATCATCACAGTGTACTGTACCGACCGCTCAATGTGGATGCAGCGGTCGGCGCGCAAGAGGCACAAAACCTAAGCATGGATGCTGGTGGCGCTTTGGATGCCAGCGCCACATTGCCTTCCTCCCCGGCGGGCATCTCCCGCCAGCAGCTGATCAATTCCCCGTGTCCGATATGCGGCGACAAGATCAGTGGCTTCCACTATGGCATCTTCTCGTGCGAATCCTGCAAGGGCTTCTTCAAGCGCACCGTCCAGAATCGCAagaactatgtgtgtgtgcgtgggggTCCCTGCCAGGTGAGCATCTCCACGAGAAAAAAGTGTCCCGCCTGCCGTTTCGAGAAGTGCCTGCAAAAGGGCATGAAACTGGAGGCGATACGTGAGGATCGCACCCGAGGTGGTCGTTCCACCTATCAATGCTCCTATACACTGCCCAACTCGATGCTAAGTCCGCTGCTTAGTCCGGAtcaggcagcagctgctgctgcagccgccgcagcagttgtcaatcagcagcaacaccagcaacatcaacaccagcagcatcatcaacagcaacagcaacagcaacaacagcagcaacatcagcgacttcagcagcagcaacaacatggtGCAGTGAATGGCTTTGGTGTTGGTGGCTCCAACTCATTGCCAGCCAGTCCCAGTCTTGGCGTTGCATCCATCAAAACAGAGCATTCAGATCAACTCAATCATCATCCATTAACACCGTCACGAGCCTCAAGCATTCCAGCCCTGTTGCAGGATATCATGGATGTTGAACATCTCTGGCAATATACTGACGCTGAATTGGCGCGCATCAATCAACCCCTGTCCTCATTTGCATCGGGtggctcatcatcatcgtcgggCGGTGCGGGCGGTTCAAGTTCCGCCGGACAGCATACTGCCAATGCACAACAGATGACCAATCCACTGCTGGCCAGTGCAGGTCTCTCATCCAATGGCGAGAACGCCAATCCCGATCTGATTGCCCACCTCTGCAATGTGGCCGATCATCGTCTCTACAAGATTGTCAAGTGGTGCAAAAGCTTGCCGCTCTTTAAGAACATTTCgATTGACGATCAGATTTGCCTGCTCATCAATTCGTGGTGTGAACTGTTACTCTTCTCCTGCTGTTTTCGTTCCATTGATACGCCCGGCGAGATTAAGATGTCACAGGGTAGAAAGATAACGCTGGCACAGGCCAAGACCAATGGCTTACAGGCCTGCATTGAGCGTATGTTAAATCTGACGGATCATTTGCGTCGCCTGCGCGTTGATCGCTATGAATATGTTGCCATGAAGGTAATCGTGCTGCTGCAGTCAGACACCACCGAGTTGCATGAGGCAGTTAAGGTGCGCGAATGCCAGGAGAAGGCGCTGCAGGGCTTGCAGGCATACACCCTTTCTCATTATCCCGATACGCCGTCCAAGTTTGGTGAGCTGCTGTTGCGCATACCCGATCTGCAGCGCACTTGTCAGcttGGCAAGGAAATGCTGACGATCAAGACGCGCGATGGTGCAGATTTCAATTTGCTGATGGAATTGTTGCGCGGAGAACATTGA
Protein Sequence: MPNMSSIKTEQSVSPGASGGVSGSYQLPVNMSTTTATITTTATTISQHQQQHQQQQQRHNVSVTNIKCELDELATPTNGNLVPVIANYNNHNNHHNNHNHSVGGGGGGGGGSLRIPLGHNEDDSDSDAELAHIENLKVRRRAADKNGPRPMSWEGELSENETNGGADEEELMETETVIKSEVTSSSNSSSSQVNAMLQPIKTELEHIAGEMQQQQLQQQQQQQQQQQQQLQQLQQLQQPQQLLPLKHKLKLAPTQSDPINLKYEPTTTTTTTTSLLCDRSKSNSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGVAALFPGNAANGGGGGNGALHHHSVLYRPLNVDAAVGAQEAQNLSMDAGGALDASATLPSSPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAAVVNQQQHQQHQHQQHHQQQQQQQQQQQHQRLQQQQQHGAVNGFGVGGSNSLPASPSLGVASIKTEHSDQLNHHPLTPSRASSIPALLQDIMDVEHLWQYTDAELARINQPLSSFASGGSSSSSGGAGGSSSAGQHTANAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLSHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00575636;
90% Identity: iTF_01320497;
80% Identity: iTF_01325717;