Basic Information

Insect: Scaptomyza montana
Gene Symbol: lov
Assembly: GCA_018904305.1
Location: JAEIGR010000005.1:949691-959949[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.9e-19 2.2e-15 56.2 0.0 1 44 893 936 893 937 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.9e-19	2.2e-15	56.2	0.0	1	44	893	936	893	937	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGTCGAGGAGCTGATAAAACGCTGCAAACTGACTTCATTGCCTCTGGCGTTGCATATGAACGATTACGGCCGCCAGGTGGCGCCAGCGCTGCCGCTGCCGCTCCTAGCAAAGCCGCCAACAACAACGATGGCAACAACTGAAGTTGGCATTGGAGCTGATCGTTCCCATCATCCTCATCATCTGCATACGCATCATCATCAGCATCAGCTGACGCCCTCGTCGCATGCCAGCCACGCTCATCCATCGATGCACACAACACCGCCCACAACGCCGCCCACGCCGCCACCGCTGCCACTAAACATGAGTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCACAGTCCACCTGCCACACCCACTGCGGTCAGCGCACCGACGCAAGATCATTATAGCCTGCGCTGGAACAACCATCAGAATCACATCCTGCGCGCCTTCGACGCTCTACTGCAGACCAAGACCCTTGTGGATGTGACCCTGGTCTGTGCTGAGACCTCGATACGAGCCCACAAAATGGTCCTCTCCGCCTGTTCGCCCTTCTTCCAGCGCGTCTTTGCCGAGACGCCCTGCAAGCATCCTGTCATTGTGCTAAAGGACTTCCGTGGTTGGGTGGTCCAGGCAATTGTGGACTTTATGTATCGCGGCGAGATTAGCGTACCCCAACAGCGACTCCAGACCCTGATCCAAGCGGGAGAGTCACTGCAGGTCCGCGGCTTAGTGGAGAGTTCTGTTCCGGAACACACTCCCACTCCAGCTGCCTCACCGGACGATTTCAATCTGCTCGACGCCTCGCTGCTTTCCTCCAGCTTCGAGGACGAGTCGCCCTCAATGGTCAGACCCTCAACTGGCAAGCTGATTATGCCTTCCCGATTCTTTGGTAACCCTTCGAGCGCGATGGCGGTGCTTAGTATGCGACGCAAGCGAGAGCAGGAATGCGAACGGGAACTGGAGAGCGATCAGGAGCTCGGGGGAAGCTCACCCATGCCTCGGCGGAAACAAGCGCGCCCAAGGCGAAGGTCGGGTGATGTGCCTCACGACTTTGCGCTAAGTAAACCAGAGACATCAATGGAGACACTACAAACTGTGATCAAACATGAGCTGCAGGATGAGCAGGAACCGGAGCAGACCGATAAGCAGCGATCCGAAAGAGAGGAAGAGAGTAATCCCATGGAACTAGATGATCAGCAGTCACAGGAAATTCACGAGAACGAGGAGGGAGTTGCAAACGAAGTTGACCTGACTGATCGGTCGGATCACAGGGATGAACAGCAACAGGAGCACGCTTTACCCCTCATCACTCCTAGCAACCCGAGCAATCAGCAGATGGAGCAGGAACTGGATGAAGAGGACGATGAGGATGATCGAGAGCAAGAGCATGATCAGGAGCAAGAAAACGATCTCGATCAGGAAGAGCCCGATCATGAAATCGATCACGATCCGGAGGAGGACGAAGAGGAACAAGACATTGAAGAGCTTATACATACGACCAATGAACTGCGGCGTCAAGCGGCAGTCGCTGCTGCCAATGCGGCAGCAATGTCACCCTGTCCCAGTGATGGCCCCGAGGATCTGTGTACCACCAAGAAGGATAAGGACACAAGTAATTCGCACTCCTCAGATAACGAGAGCAACAACAACAATAGCAGTAAACTGCAGGACAACAATCAACGCATCATGTTGTCCCTAAAGGACATTCGACAGCTAAATGCCAAGCCCAGTGCCACTTCAACACCCACCCACACGCCCAACAGCTGTGCGCCAGGGAACAATGGTATGCTGTCATTTCCCCCACCCGGCTTGCGTCCGCCAGGCATGAACGACAGTCCACCCTGCCACATGGAGGCTCTCGAAGCGCAAATGCATGCTGCGGCTGCTGCCGCCGTAGCTGCTGCAGGTGCCGGCGAGAATCCCTTCCATCATATGGAGCATCAGATGGAAATGTCGCTAGCGGCAGCAGCTGCAGCAGCAGCCATGCATCAGCGGGATCCCCGGGATCACAGGGAGACCCGGGAACAAGCGATGCAGAGGGAGCACAATGCATTCGCCAGTAATCTTTTGGGTCCAATGGGTCTGCCACCTTTCCATGGGCACAATGGCTCCATGCCGGGAGGCGGATGTCCGGGTCAGGCGCCGCATGAGCGGCTCGAGGAGAGCATGAATCGTCTGAGCAAAGAGTTTGGCAAGGAGTTCGGCAAGGAGTTCGGCAAGGACTTTGGCAAGGACTTTGGCAAAGATTTCTGCAAGGAGTTTGCGCCCACATCGCCAATGAGCCTGCCCGGTCACTACAATCCGCAGGACGGACACCAACATCCGCCGTCACCGCTGCCTTTTCCCGGTATGTCCTCGGCGTTGACGCTGACCCCACCGCACATGTTTGGCTTGGACTCGCCACTTGGCTTATTTCCGCCCGGCATTGATCCTGGCAAACTTTATAATCCGCTAATGGAAATGAGCGATCCACGCGATATGCCCGGCGGACCGCCACCGTTTCTCAAAAAGAAAATGCCACGCCCCAAGGGACAGCATTCGGCGCCAAGAGGAGGTCCACCACGGTCGTGGACAAACACAGAGCTAACAGAGGCACTGCAGCATGTATGGAACAAGAAGATGACCACGTCGCAGGCCTCGCGTATCTTTGGAATACCCTACAACTCCCTGCTGATGTACGTGAGGGGCAAGTATGGGAAGAGTCTGAAGCTGGAGCAGTTGCGCAAGGATTGCATTAGTGGACCACCGATTGAGATGCTTCAGATGGGCATCAGTGGTGGCGGTGGAGGCGGTGGCTCCAAGAGCGAGAAAAAGGAGCGCAAGGAGAAGGACAAGGAGAAGAATTCCTCATCCAACAACTCTAGCTCAGGCAACAACAATAGCTCTGGTGGTTGCGGCAATCCCAATTCATCCCAAATGCCACATCCCAGCGATTTGGGTTCATTGGGTCCACTCGATTTGGAGCTGGGACTGCCGCTGGGTCCACCCGCCGGCCCACGCAGTGGAAGCTCAGAGCCGGATCTGCTCGGAGGACCTGGAGCACTCTTCAATCCCTTCAATCCACAGGGCTTCTATCCGGACTTTGCTGGTGGTTTTCCTGGTCTCCCGCTCAGCATGCTGAATCTTCTTCCGCCGTCGGAGCGTCATCATGCAGCTGTGGCCATGCATCATCTGGGTGTCAGCATGGATGAAGACTGCAAGTCCGTTGGCTCAAAGCAATCCTCCTCCCTGGACGATGACTTTACAGGTCTTCCACTCTCGCTCGAACAGCGACGGCACAGTGAACTCTCGAGCAATGGAGCGCCAACGTTGGCCCAGGCGAATGGTGCGGCACAGGATTGA
Protein Sequence: MLKDVEELIKRCKLTSLPLALHMNDYGRQVAPALPLPLLAKPPTTTMATTEVGIGADRSHHPHHLHTHHHQHQLTPSSHASHAHPSMHTTPPTTPPTPPPLPLNMSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHSPPATPTAVSAPTQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLLSSSFEDESPSMVRPSTGKLIMPSRFFGNPSSAMAVLSMRRKREQECERELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALSKPETSMETLQTVIKHELQDEQEPEQTDKQRSEREEESNPMELDDQQSQEIHENEEGVANEVDLTDRSDHRDEQQQEHALPLITPSNPSNQQMEQELDEEDDEDDREQEHDQEQENDLDQEEPDHEIDHDPEEDEEEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDTSNSHSSDNESNNNNSSKLQDNNQRIMLSLKDIRQLNAKPSATSTPTHTPNSCAPGNNGMLSFPPPGLRPPGMNDSPPCHMEALEAQMHAAAAAAVAAAGAGENPFHHMEHQMEMSLAAAAAAAAMHQRDPRDHRETREQAMQREHNAFASNLLGPMGLPPFHGHNGSMPGGGCPGQAPHERLEESMNRLSKEFGKEFGKEFGKDFGKDFGKDFCKEFAPTSPMSLPGHYNPQDGHQHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGGSKSEKKERKEKDKEKNSSSNNSSSGNNNSSGGCGNPNSSQMPHPSDLGSLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPGALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPSERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDDFTGLPLSLEQRRHSELSSNGAPTLAQANGAAQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00534666;
90% Identity: iTF_01326317;
80% Identity: iTF_01324228;