Basic Information

Insect: Scaptomyza hsui
Gene Symbol: L
Assembly: GCA_018152825.1
Location: JAECXO010000002.1:14589615-14596707[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.4e-06 0.00078 19.9 2.9 1 23 160 182 160 182 0.98

2 18 0.32 27 5.6 6.2 1 23 188 210 188 210 0.97

3 18 1.6e-07 1.3e-05 25.5 3.2 1 23 216 238 216 238 0.99

4 18 1.2e-05 0.00095 19.6 0.4 1 23 244 266 244 266 0.99

5 18 0.028 2.3 9.0 0.1 1 23 340 366 340 366 0.95

6 18 0.00012 0.01 16.4 0.7 2 23 399 421 398 421 0.96

7 18 0.025 2.1 9.1 0.7 1 23 488 510 488 510 0.97

8 18 0.0048 0.39 11.4 0.1 2 23 518 539 517 539 0.91

9 18 0.00019 0.016 15.8 0.1 1 23 547 571 547 571 0.93

10 18 4.2 3.5e+02 2.1 0.3 2 20 577 595 576 596 0.91

11 18 4.8 3.9e+02 2.0 1.6 2 23 607 629 606 629 0.95

12 18 0.0023 0.19 12.4 1.1 1 23 679 702 679 702 0.97

13 18 0.0059 0.49 11.1 1.6 2 23 873 895 872 895 0.96

14 18 0.11 8.8 7.2 0.1 1 23 901 923 901 923 0.92

15 18 0.51 42 5.0 0.4 2 23 931 952 930 952 0.93

16 18 0.9 74 4.2 0.5 2 23 1050 1071 1050 1071 0.94

17 18 0.045 3.7 8.3 0.0 1 23 1081 1103 1081 1103 0.94

18 18 0.0002 0.017 15.7 1.2 1 23 1108 1130 1108 1130 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.4e-06	0.00078	19.9	2.9	1	23	160	182	160	182	0.98
2	18	0.32	27	5.6	6.2	1	23	188	210	188	210	0.97
3	18	1.6e-07	1.3e-05	25.5	3.2	1	23	216	238	216	238	0.99
4	18	1.2e-05	0.00095	19.6	0.4	1	23	244	266	244	266	0.99
5	18	0.028	2.3	9.0	0.1	1	23	340	366	340	366	0.95
6	18	0.00012	0.01	16.4	0.7	2	23	399	421	398	421	0.96
7	18	0.025	2.1	9.1	0.7	1	23	488	510	488	510	0.97
8	18	0.0048	0.39	11.4	0.1	2	23	518	539	517	539	0.91
9	18	0.00019	0.016	15.8	0.1	1	23	547	571	547	571	0.93
10	18	4.2	3.5e+02	2.1	0.3	2	20	577	595	576	596	0.91
11	18	4.8	3.9e+02	2.0	1.6	2	23	607	629	606	629	0.95
12	18	0.0023	0.19	12.4	1.1	1	23	679	702	679	702	0.97
13	18	0.0059	0.49	11.1	1.6	2	23	873	895	872	895	0.96
14	18	0.11	8.8	7.2	0.1	1	23	901	923	901	923	0.92
15	18	0.51	42	5.0	0.4	2	23	931	952	930	952	0.93
16	18	0.9	74	4.2	0.5	2	23	1050	1071	1050	1071	0.94
17	18	0.045	3.7	8.3	0.0	1	23	1081	1103	1081	1103	0.94
18	18	0.0002	0.017	15.7	1.2	1	23	1108	1130	1108	1130	0.97

Sequence Information

Coding Sequence: ATGATGGCTTTAAAGATGTTATATCGTGGTCCAAGTTCGCGTTTGGAGAATTTAATTGAAAAGATTCAGGCCACAAAGGAGATTTCAAACAACGATATGTACAGCACGCACACCTCTTCGAGCTATTCGCCAAGCATCTCGGATGGCACACTGACGCCCAACTCGGTGCAGCAGCCAAAGTCCGAGGAGCACCAAACAGAAGAGTCCAAGGCTAATGGTGAAGGTACTGGCATGGAGCAACAAGAGCTGCAGAAGCCAAAGCGACCTCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCTGAAAATTGCCAACAAGCTGCGCAAAATCAATAAGGAAGCCAAGTTGGCAGCAGCCGCAGGAGCCGGAGCAGGTGCAGGACATGGAGGTGCAGGAACCGGAGCAGCCGCCAACAAGTTTGATAAGTTGACAGGCGAAAGCATTAAAAGTCGCGGCGACGGCTCCTATCAGTGTCAGTTTTGTGATAAATCATTTCCGCGTCTCGGCTACTTGAAGCATCACGTGCAGAGCCATGCCGAACATTTGCCTTTCAAATGCGAATACTGCGCCAAGCTATTCAAACATAAGCGCTCCCGAGATCGTCATAAGAAACTGCACACGAACGAGAGGAACTACAAGTGTCCGCATTGTGAGGCTGCTTTCTCCAGAAGCGACCATTTAAAGATTCACATGAAGACGCACGATATACAGAAGCCCTTTCAGTGCAGCATGTGCAATCGTGGATATAATACAGCTGCCGCTTTGACCTCCCACATGCAGAAGCACAAGAAGAATGCGGCAATCCTCGCCGCTGGCGGTAATCCCAATGCATTGAATTATAGTCCACGTTCCACGGGTTCTGCCTCAATCTCCAGCAATGGTAGTCTACACAAGCGTCGTTATGCTTTAGCTCTGGCTTCCGATAGTAGTCCAAGTCGTCTGGAGTTTCCCAAGCGGGCACGTGGTGGTGGAGCTGTACCAACCACGCCCACTCCAACGCCCCTATTTCGATGCAGCTATTGCAGTCCCAAAGTGACAGAGTTTAGCAGTCTTGAGCAACTGAATGCACATCTTCAAGCGGCACACGAACAACAGCAGCAACAACAACAGCAGGGAGGAAGAAGCTCCACAACAACCATCACAGCGGAAACAGTGGAGATTCCTACTAACGGATTTCAGCTCAATTGCGAATATTGCACCATGAAATTTGTCAATATTGCGTCACTCTTTCAACACATGCGTACAACCCATTTGGATCGTCTGAGCAGTCCAAACTCCTACTATGAGCACTTCAATCGTCTGGCAACCGCAGGCACTTTCAGTCCTCGTCTGGAGATGCCCAAGATCAAGCAGGATCTGCCAAGTCCACCGGCGGAGGAGCTGCCGACGGATCTGAGCAGCAATAAGCGCAGAACTTTAACGCCACCACCACCAGCGCCACCTGGCGTCTTCTTTTGCAATCAGTGCAATGCCGGGTTGCCAGACTTTGAAAGCTTTCGAAATCACTTGAAAACACACATTGCCGAAGGCATGCAACTGATATGTCCGCACTGTGGCTTGAGTCTGCCGGAACAAAGTGAATTTGAGCGTCATGTTGTTGCACATTTTTTAATCACCAGCTCCGAGTTCAATTGTGGCGCCAGCTGTGGCAAGTCCTTTGCCAAGTCGGAGGAACTGCAACAGCATCTAATCAGTGAACATGTTCAGACCCTGTTAAAGTGTTCCATCTGCTCGGAGCTGTGTGAGAACCGGATGTCCATGCAGCTCCATTTGGCCTGTGCTCATAGCCAGGAGACGAAGTTGCTCCGCTGCAGCGCTTGCTTGGAACTATTTCGCAATGACACGGATTTCCATGTGCACGTCAAGACACGACATCAGTTGGTCGGAGGCAGTGCTCCTTCCGGACCCGGCGGTGGTCCTCCCACTGCTCCCCCTGCGAATCCCTTGCAGTGCATGTTTTGCCGCGCCGTTTGCTCCTCAGAGTTGGAAATGCATTTCCATTTGGCGGCCCATGCTCGCCAGTTCCGTTGTCCCAGTTGCCCCGAGACGTTCCACGTGGAGTTCCTGCTCGATCGTCATATGCAGAGTCAGCACGGTGGCGTCAAGGATAAGCAGGAGCAGGGCTCAAATCCCATGGGCAGTCTGTATGTGAATGCCTTGTTGCCTCCGCTGGCGGCTGCCGCTGCAGCTGCTGCTGCTGCCACAAATAATAACAGTAATCTCCACATCGATTACAATGTGGCATTCAAAGGACTCTTCGGTGGAGGCAATGCCACGCCCACTAATCAACAGCCAGCCAACAAGTTCTACAGTCCATTGCAGGTTGATACCAGTGCTTTGAAGCCACAACAAACTCCACATCCTGCATTGATGTACGGTCTTAGTCAACGTTATTTGATGGAGATGTATGCAGCGAAGGCAACCTCTCCAGCGGCCAGTGCTCCTGAACTACCGGCACAGGCAACCCAAGCAGCAAATGCGGCAGCATCCAATACCGGAAGCAGTTACAGTTGTGGCATGTGTGAGCGTCAGGATTTGCGCAGTGAGGCGGAACTTCATTCACATCGGAAGCTAGCTCACAATCTCAAGACCGGAGTCAGTTTGAGATGTGCCTACTGCTCCGGCAATTATAAGTCCCGGGCGGAGCTGGAGCAACACATGAAGAGCTGTCACAATTCGAGTGGGAAACACAAGTGTCTCATTTGTGATGAGATCTTTCCATCGCCAGCCATTCTCGCCGAGCATAAGCTGCAGCACTCCAAGGTGGGTCAGTCGGGCAAGTGTGCCCATTGTGGTCAGCAGTTGGAGCATGTGGCTGCATTCCGTGCACATCTCGGGGAGCATGGTAACGATGGTAATCTACCCATGGCTTGCATTTGTTGTCGTCAAACTTTACACTCTGAGTTTGAGCTGAGTTTACATGCCAAGTTCCACACCAAATCTCCAAATTGTGGTAGTCTTCAGGAGCCCGTTTGTGCTTTGTGTTTGGAACCCTTGCCGGAAGCGGGAGAAACTGCAAAATTGTGCGATAAGTGTTGTCGCAAACACAATCTCAATGGTAAGAGGAACAAGGAAGCACCTCCGCCGGTAGCTCCCCAACAACCGTCAGCAACCTCGGTAGGTTATCTGGAGAATCGCTGTAATCTCTGCAAGCTCATATTGCCACATGCTCAAAAGCTGCAGGAGCACCTGGTAGAGCATACGTTTGCCGGTACCGAACAGCGTGGCTTCAATTGCTACATTTGCTCAGCGGTATTCACGGCTCCAGGCGGTCTCCTCGCCCACATTGGGGAGCATGGTGCTCGACCCTACGATTGCAATTTGTGCCCCGAGAAGTTTTACTTTCGTGCCGAGCTCGAGCATCATCAGCGCGCCCATGAACTGCGACAAATACCAGCACCAGCACCCAATCCTCCACCTCCGGTACGTCCATCACCCAAACAGGAGAATCACAGCTCCTCGGCCAGTTCGCCCATTCTCAGTCCCAGTCATGTAAAACAGGAGCTTTATGAGTCGGAAGCCGCAACATCACCACAACAGCCAGAAGAGTCTCCAGCCCAGGATGATGAGGAGTACATTGAGGTCGAGCAGGTTCCGCATGAAACCCGCTCCAATGAACTCTTATCCAGTGGACAACCCGAACGTTCTAGCAGCAGTGCCTGA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEISNNDMYSTHTSSSYSPSISDGTLTPNSVQQPKSEEHQTEESKANGEGTGMEQQELQKPKRPPXXXXXXXXXXXXXALKIANKLRKINKEAKLAAAAGAGAGAGHGGAGTGAAANKFDKLTGESIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSLHKRRYALALASDSSPSRLEFPKRARGGGAVPTTPTPTPLFRCSYCSPKVTEFSSLEQLNAHLQAAHEQQQQQQQQGGRSSTTTITAETVEIPTNGFQLNCEYCTMKFVNIASLFQHMRTTHLDRLSSPNSYYEHFNRLATAGTFSPRLEMPKIKQDLPSPPAEELPTDLSSNKRRTLTPPPPAPPGVFFCNQCNAGLPDFESFRNHLKTHIAEGMQLICPHCGLSLPEQSEFERHVVAHFLITSSEFNCGASCGKSFAKSEELQQHLISEHVQTLLKCSICSELCENRMSMQLHLACAHSQETKLLRCSACLELFRNDTDFHVHVKTRHQLVGGSAPSGPGGGPPTAPPANPLQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGVKDKQEQGSNPMGSLYVNALLPPLAAAAAAAAAATNNNSNLHIDYNVAFKGLFGGGNATPTNQQPANKFYSPLQVDTSALKPQQTPHPALMYGLSQRYLMEMYAAKATSPAASAPELPAQATQAANAAASNTGSSYSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNYKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLGEHGNDGNLPMACICCRQTLHSEFELSLHAKFHTKSPNCGSLQEPVCALCLEPLPEAGETAKLCDKCCRKHNLNGKRNKEAPPPVAPQQPSATSVGYLENRCNLCKLILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPGGLLAHIGEHGARPYDCNLCPEKFYFRAELEHHQRAHELRQIPAPAPNPPPPVRPSPKQENHSSSASSPILSPSHVKQELYESEAATSPQQPEESPAQDDEEYIEVEQVPHETRSNELLSSGQPERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01322853;
90% Identity: iTF_01320651;
80% Identity: -