Shsu001537.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- dmd-4
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000073.1:9733188-9735791[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-25 9.3e-22 76.8 9.2 1 47 35 81 35 81 0.98 2 2 0.36 1.4e+03 -0.6 0.2 23 32 294 303 286 307 0.78
Sequence Information
- Coding Sequence
- ATGGCCGATGATATTGTTGGTCAGAGCCAAATAAACTCTAAACGCTCACGTATCGCTGGCAGCTCAAAGATTGTGAAACCAGTTGAAACGAAAACCTCGAATCGAGTGCCCAAATGTGCCCGTTGCAGAAATCATGGTATTATCTCTGAGTTGCGAGGTCATAAAAAACTCTGCACTTACAAGAGCTGCAAGTGCAACAAATGTGTCCTGATCTTTGAAAGGCAACGCATTATGGCTGCCCAGGTTGCCCTGAAGCGTCAGCAGGCGGTCGAGGATGCGATTGCGTTGCGACTGGTGGCCAATAAGACTGGACGCAAAATCGATGCACTGCCGCCGGGCAGCATCTTTGGCCTAACCGTCACGCAGCCCAAGGAACAGCAGCAGCAGGCGTCAATAACAGCAGATGCTTCACAGGAGCTGGAGGAGCAGCAGGAGGCATCGCCGTCCAAGCCCGACCAAGAGCCAGAAGCTTTGGTTGTGCCACAGGATCTGAGTGGCAGGCGTCGTGAGCAGGTCTCCCAAACGGCCATCGATATGCTGGCCCAGCTATTTCCACAGCGCAAACGTTCCGTTCTGGAGCTAGTTCTCAAACGTTGCGATTTGGATTTGATCCGAGCCATCGAGAACGTTTCGCCGCTGGCTGAGCAGACGTCCGTGGAGCAGCGGCAGCTGCTATTGCCGCCACCTCCGCCGGCTCCTCCAACGCTGCCACAATCCTTGCAGCTAGCTCTGCCGCCTCGCAGCAGCGCCTTCAGACCAGTTATCGCAGAGCAGTTCGCTGGCAAATCTTCGTCAGCCGCTGCCATCTGCGCCTATCCCAAGTGGTTTGTGCCCTTGTCCTTTCCGGTAACCATGGGTCATCTGTCCAATTTGGCGCCACGCTGCACTCTGCCCAACTGCAACTGCCTGGAGAGCTACCAATTTCACTAG
- Protein Sequence
- MADDIVGQSQINSKRSRIAGSSKIVKPVETKTSNRVPKCARCRNHGIISELRGHKKLCTYKSCKCNKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKIDALPPGSIFGLTVTQPKEQQQQASITADASQELEEQQEASPSKPDQEPEALVVPQDLSGRRREQVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPLAEQTSVEQRQLLLPPPPPAPPTLPQSLQLALPPRSSAFRPVIAEQFAGKSSSAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCNCLESYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01320484;
- 90% Identity
- -
- 80% Identity
- -