Shsu003820.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- dmrta2
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000003.1:3921551-3925305[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-27 9.9e-24 83.1 10.8 1 47 37 83 37 83 0.99
Sequence Information
- Coding Sequence
- ATGAGTTTACCGTCGGGCGTCGATATGCAGAATCTAATGTCACAGCATCCGGTGTTGGGCGCCCTACCGCCCGCATTTTTCCTGCGTGCCGCCTCGGAACGTTATCAACGCACTCCAAAATGTGCCAGGTGTCGCAATCATGGCGTGGTCAGCGCATTGAAGGGTCACAAACGTTATTGCCGCTGGCGGGATTGTGTTTGTGCCAAGTGCACCTTGATAGCGGAACGGCAGCGTGTGATGGCCGCACAGGTGGCGCTGCGACGCCAGCAGGCGCAGGAGGAGAACGAGGCCAGGGAACTGGGACTGCTGTACACCTCGGTGCCCGGATCGGGTCAACAGAATGGCAGCGATAGTGTAACGCCCACCCCACACAGTCCCACCGGCCCGGGCGCCAACTCGGCCTCCACACAGAATGGTGTGTTCCATGGCGGAATACCTTCGCCGCCCAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGATGGACGCACACGTTCCGAGCACCTAAGCGTTGGTTTCTCACCCACACGCACCGAACTGGACGAGAGTCCTGTTTCCAAACGCGGTGCTGCTCTCTCGAATGAAACCGATCAGGATACGGGTTCCGAGTCCGGCTCGCCCAGTAGTCCTCGGCCCAAGGTCGCTGGTTTGTTTAATCTGACCTCCAGTCTGTCGCCCGCACGCACCGGTCCGCCCAGCTCACCTGAGTCCGATTTGGATGTGGATTCCGCACCGGATGAGGCCACGCCGGAGAATCTCAGCCTCAAGAAGGAGGACAGCAACTCGCCGCCAAACACACCCGCCGAGAATCTGCATCTGTTGCGCTCCTTTGGCAATGGACATGCCCAGGGCTTCATGCCCTATCATCATACGCAGTTCCTGGCCGCCGCCGGACTGCCCACACATCATCCGGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCAATCGATGTCCTGATGCGTGTGTTTCCCAATCGGAGACGCAGCGATGTGGAACAGCTGATGCAACGCTTTCGTGGCGATGTCCTGCAGGCCATGGAATGCATGCTCGCTGGCGAGGATCTGACGCAGACGCCAACACCGCCCTCGGCACAGGTTCCTCCCTCGCCGCCATTCCCCATGAAGTCCGCCTTCTCGCCGCTGGTACCGCCCGCTGTCTTCGGTTCGCCCACCCATCCGCATCGGTATCATCCCTTCATGCAGGCGCATGCCAAGCGTTTCCTCTCCGCTCCGTATGCAGGCACAGGCTATCTGCCCGGAGTGCTGAGCAGCTCGGATATCGATCAATCGGAGTCGAATGGTGCTGGCGGTATTCCCATGGATCGGAGTAGTAATGCTGGGGACTCCCAAGATTGA
- Protein Sequence
- MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPGSGQQNGSDSVTPTPHSPTGPGANSASTQNGVFHGGIPSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRTRSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTSSLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSNSPPNTPAENLHLLRSFGNGHAQGFMPYHHTQFLAAAGLPTHHPAAXXXXXXXXXXXXXXXXXXXXXXXXSPIDVLMRVFPNRRRSDVEQLMQRFRGDVLQAMECMLAGEDLTQTPTPPSAQVPPSPPFPMKSAFSPLVPPAVFGSPTHPHRYHPFMQAHAKRFLSAPYAGTGYLPGVLSSSDIDQSESNGAGGIPMDRSSNAGDSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01324126; iTF_00534594; iTF_00337541; iTF_01551014; iTF_00571176; iTF_00577801; iTF_00483709; iTF_00584439; iTF_00555866; iTF_00549566; iTF_01324916; iTF_01553247;
- 90% Identity
- iTF_01322660; iTF_01324916; iTF_01324126;
- 80% Identity
- -