Basic Information

Insect: Scaptomyza hsui
Gene Symbol: retn
Assembly: GCA_018152825.1
Location: JAECXO010000002.1:10859944-10881385[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.1e-26 1e-22 80.4 0.0 2 89 306 391 305 391 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.1e-26	1e-22	80.4	0.0	2	89	306	391	305	391	0.96

Sequence Information

Coding Sequence: ATGCAACTCCGAGTGCATCCGACTATGGATTGTAGCGGCCGTTCACATAACAATATTGAGCGCGATTCCGATTTGGGTGACGATTTGTCTCACGGCGATCGCACGGATGACGAGATGCGCGACTGCGATTCCGTTGACGGTGAACAGCAACATCATCAGTTAAGCGCCAAGGCGGCAATTGCAGCCCGTCTCAGTCACACAGTTGCCGGCGGCACAAGCCACAACTTCAACAGTCCGGAGCAGCAAACCGATTTGCCTTTAAGCCATCATCATCAGTTGCCACCGAATCATCCGCTTAATGCTTTGGGCAGCTTTATGGGCATCGGCGGTCTACACAGCATTCCAAATCTGCAGCACAGTGATGTACTCGAGAAGCTCAAGATGCAAGTGCGAGACATGAAAGTGGGCCTAATGGAACAGGATTATGCTGCGGCGGCACATGCCGCAGCCTTCGGGGCCAACATGTTGCCCACAACAATCAGCACGGCCTTTCCACTGCCACACAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAACTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTTGATGATTTGTTTTCATTTATGCAAAAGCGAGGCACGCCCATTAATCGTTTGCCCATTATGGCCAAATCGGTGCTGGATCTATATGAACTATATAATCTGGTGATAGCTCGCGGCGGTTTAGTCGATGTCATCAACAAGAAACTGTGGCAGGAGATTATCAAGGGACTGCATCTGCCCTCGAGCATAACAAGTGCAGCCTTCACACTGCGCACACAATACATGAAGTATTTGTATCCCTACGAGTGCGAGAAGAAGAATCTGAGCACACCGGCTGAACTCCAAGCGGCCATTGATGGCAACCGGCGCGAAGGACGTCGTTCCAGCTACGGTCAATACGAGGCCATGCACAATCAGATGCCGATGTCGCAAATTTCACGCGCACCTTTGCCTGGTGGCATGCAACAGATGTCGCCGCTGGCGCTGGTCACACACGCCGCTGCGGCCAACAATCAGCAGGCGCAGGCAGCGGCCGCAGCTGCAGCGGCACATCGACGCCTGATGGGCGGACCCGCGTTTGGTCAGATGCCCAATTTGGTCACCCAAGAGATTGAGAATCGCATGATGGAATATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGCGCTGAGTGCTCAGGTGGCATTGTGGCATATGTACCATAATAGCAGTCCCACCAACTCAGCGCACACCTCGCCACAGCAACGCGAAGCTCTGAACCTGTCCGATTCGCCGCCAACCTTGAATTTGAATCACATCAAACGTGAACGTGAACGCGATCCAACGCCCGAGCCCACAGATCTGGAGGAGTCGGCACATCAGCCGCCGCCAGCAAAGCGTGTGGGCAGCACTTTAATGCCACCTGGTTTTCCTGCCAACTTCTACTTGAATCCACACAATATGGCCGCTGTGGCAGCTGCCGCCGGGTTTCATCATCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATGCAGCATCCGAAGGTGAACCGGAGGATGATTATGGCAATGGAGAGCACAATACAACCGGAAATTCATCTTCGCTGAATGATGATAGTGAGCCACAGCAACTGAATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGATAAGTCGGATGATTCGGCCATTGAGAATTCACCCAGCACATCGACAACAACAACAACAACAACATCGCATCGTCACAGTTCGCCAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGCAATCCTCAAGTGCAAAGGATGAAGGCAACAACAGTGCAAGTGGAGATGTCAAACTGAATCCTCTCGAGACGCTCAGTCTGCTTTCGGGCATGCAATTCCAAGTGGCACGCAATGGCACCAATGCGAATGGTGAACAGCAATTGATTGTCAATCTCGAACTGAATGGCATCAAGTATACGGGTGTGTTGGTGGCATCCACTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGAGTTGCCAGCTGCAGCGGAGGAGGAGCCAACATCTCGGAGCAACAACGAGAATGAACTCAAGCATGACAACAGCCAGGAACTAAGCCAAAATGAGGCAATTGATGAAGAATCAACAACAACACAGGAACAGCAACAACAACACACAGAGGACATTGTGAATGGGACAGCGAGTGTTGTTGGTGTTGGGTGGGGGTATTGGTTTGGTTTAGGTGTAGGTGTAGGGGTGGGGCTAAGTGTGGTGGGTGCAAGTCTGCTCAAAGATGCTGTGGTCAGTTCGTAG
Protein Sequence: MQLRVHPTMDCSGRSHNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEQQHHQLSAKAAIAARLSHTVAGGTSHNFNSPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMSQISRAPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALSAQVALWHMYHNSSPTNSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEESAHQPPPAKRVGSTLMPPGFPANFYLNPHNMAAVAAAAGFHHQXXXXXXXXXXXXXXXXDAASEGEPEDDYGNGEHNTTGNSSSLNDDSEPQQLNGXXXXXXXXXXXXXXXXXXXXXXXXXLDKSDDSAIENSPSTSTTTTTTTSHRHSSPVSXXXXXXXXXXXXXXXXXXXXXXXXTQSSSAKDEGNNSASGDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYTGVLVASTGXXXXXXXXXXXXXPELPAAAEEEPTSRSNNENELKHDNSQELSQNEAIDEESTTTQEQQQQHTEDIVNGTASVVGVGWGYWFGLGVGVGVGLSVVGASLLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01322423;
90% Identity: -
80% Identity: -