Basic Information

Insect: Scaptomyza graminum
Gene Symbol: retn
Assembly: GCA_018901835.1
Location: JAEIFL010000132.1:11518317-11534439[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-26 7.8e-23 80.5 0.0 2 89 305 390 304 390 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-26	7.8e-23	80.5	0.0	2	89	305	390	304	390	0.96

Sequence Information

Coding Sequence: ATGCGAACAGCGATCAATGCGCCAATATGTGGCACAAAGAAGAAGAAGAAGAACAAGAAGATGAAGCTGAAGATGTCTCACGGTGATCGTACGGATGACGAGATGCGCGACTGCGATTCCGTTGACGGTGAACATCATCAGTTAAGCGCCAAGGCGGCAATTGCAGCCCGTCTCAATCACACAGTTGCCGGCGGCGCTTCGGGCCTCAACTTTACCAGTCCCGAGCAGCAAACAGATCTGCCACTCAGTCATCATCATCAATTGCCAGCGAACCATCCGCTTAATGCCCTCGGCAGCTTTATGGGCATTGGTGGCTTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTTGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGATTATGCCGCGGCGGCACATGCAGCAGCCTTCGGGGCCAACATGTTGCCCACAACGATCAATACGGCCTTTCCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAACTCATCGACGTCCAGCGAGGCATCCAATTCATCCCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGATCCCAAACGCAAGGAGTTTCTTGATGATTTGTTTTCATTTATGCAAAAGCGAGGCACGCCCATCAATCGTTTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATTTGGTAATCGCACGAGGCGGTTTGGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATTATCAAGGGGCTGCATCTGCCATCGAGCATAACAAGTGCCGCATTTACATTGCGTACACAATACATGAAGTATTTGTATCCCTACGAGTGCGAGAAGAAGAATTTGAGTACACCAGCTGAACTGCAGGCGGCAATCGATGGCAATCGTCGCGAAGGACGTCGTTCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCAATGACGGCCATATCGCGCCCATCGTTGCCGGGTGGAATGCAACAGATGTCACCACTGGCGCTTGTAACACACGCAGCAGCTGCCAATAATCAGCAGGCGCAGGCGGCGGCCGCAGCGGCAGCAGCACACCGACGATTGATGGGTGGGCCAGCTTTTGCTCAGATGCCCAATTTGGTGACACAAGAGATTGAGAATCGTATGATGGAATATCTGCAGCTTATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCAAAGTCCTGAGCTTAGTACTCGTGATGCACTGAGTGCGCAAGTGGCGCTGTGGCATATGTACCACAACAGCAGTCCAACCGGTTCGGCGCACACATCACCGCAGCAACGCGAGGCTCTGAACCTCTCCGATTCGCCACCAACTTTGAATTTGAATCACATCAAACGCGAACGTGAACGCGATCCAACGCCAGAGCCCACAGATCTTGAGGAATCAGGACATCAGCCGCCGCCGGCAAAGCGTGTGGGCAGCGGTCTAATGCCGCCCGGTTTTCCCGCAAACTTTTACTTAAATCCACACAATATGGCCGCTGTGGCAGCTGCTGCTGGCTTTCATCATCAGGCCGCAGCCAACAATCATCATCATCAGCAGCAGCAACAGCACGATGCAACATCGGAGGGTGAACCCGATGACGATTATGGCAATGGAGAGCACAATACCAGCGGCAATTCAACGTCCCTGAACGATGAAAGTGAACCACAGCAACTAAATGGACATCATCACCATCATCATCATCATGATGATCATGATCATGATCACCATAGTAATCATCAGAATCATTTGGATAAATCGGATGATTCGGCCATTGAAAACTCACCCAGCACATCGACAACCACAACAACAACGGCAACATCGCATCGTCACAGTTCGCCAGTGTCCACCAAAAAGAAGAGTAGCGCCACCAACAACAACAACAACAACATTAACAACAACAACAACAACACCAAGACACAATCCTCATGTCCAAAGGATGCAGGCAACAACAGTGGAATTGGCAGCGGCGACGTTAAGCTAAATCCTCTCGAGACGCTTAGTCTGCTTTCGGGCATGCAATTTCAAGTGGCACGCAATGGCATCAATGCAAATGGTGAACAGCAATTGATTGTCAATCTCGAATTGAATGGCATTAAATATACGGGTGTGTTGGTCGCATCCACTGGAGCAACAGCAACAGCAGCAGCAGCTGCCGTCAGAACAGAGAATGAGTTGCAGCAGGAGCAGCCAGAGCTGCCAAGTGCAATTGAGGAGCCAACAGTTGGAAGCAATGAGGATGCGCTTAAGAATGAAAACAGCGAGGAATTAAGCCAAATTGAGGCTATTGATGATGAATCAACAACAACAACACAGGATCAACAACAGCAACAGCAACAACACACAGAAGACATTGTGAATGGAACAGCGAGTGTTGTTGGTGGGGGGATTGGTTTAGGAGGGGTAGGGGTCGGGTTAACTGTGGTTGGTGCAAGTCTGCTCAAAGATGCTGTAGTCAGTTCGTAA
Protein Sequence: MRTAINAPICGTKKKKKNKKMKLKMSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLNHTVAGGASGLNFTSPEQQTDLPLSHHHQLPANHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINTAFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTAISRPSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFAQMPNLVTQEIENRMMEYLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEESGHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAAANNHHHQQQQQHDATSEGEPDDDYGNGEHNTSGNSTSLNDESEPQQLNGHHHHHHHHDDHDHDHHSNHQNHLDKSDDSAIENSPSTSTTTTTTATSHRHSSPVSTKKKSSATNNNNNNINNNNNNTKTQSSCPKDAGNNSGIGSGDVKLNPLETLSLLSGMQFQVARNGINANGEQQLIVNLELNGIKYTGVLVASTGATATAAAAAVRTENELQQEQPELPSAIEEPTVGSNEDALKNENSEELSQIEAIDDESTTTTQDQQQQQQQHTEDIVNGTASVVGGGIGLGGVGVGLTVVGASLLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01323893; iTF_01323162;
90% Identity: -
80% Identity: -