Sfla012101.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_003952975.1
- Location
- RKRM01000115.1:117724-119794[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-25 6.7e-22 77.0 9.4 1 47 37 83 37 83 0.98 2 2 0.34 9.4e+02 -0.3 0.2 23 32 272 281 262 285 0.77
Sequence Information
- Coding Sequence
- ATGGCCGATGACTTAGTTGGTCAAAGCCAAGGCCAACCTAACCCTAAACGCGCACGTATAGCTGGAAactcaaaaactttaaaaccaGTTGAAACGAAAACTTCAAATCGCGTGCCCAAATGTGCCCGTTGCAGAAATCACGGTATTATCTCTGAGCTGCGAGGGCATAAAAAACTCTGCACATACAAGACCtgcaagtgcaataaatgtgTCCTGATCTTCGAAAGACAACGCATAATGGCTGCCCAGGTTGCCCTGAAGCGTCAGCAGGCGGTCGAGGATGCGATTGCGTTGCGGCTGGTGGCCAATAAGACTGGACGCAAAATCGATGCACTGCCGCCGGGCAGCATATTTGGTCTAACTGAGCAGCCGATATCGTTGGCAAAACCTGAGCAGGAGCCAGAAGCCTTAGTTGTGCCACAGGATTTGAGTGGTAAGCGTCGCGAGCACGTTTCCTCAACGGCCATCGATATGTTGGCCCAACTGTTTCCACAACGCAAACGTTCTGTGCTGGAGTTGGTTTTGAAACGTTGCGATTTGGATTTGATACGCGCCATCGAGAATGTTTCGCCGCCGGCAGAGCAAGCGTCCGTggagcaacagctgctgctgcagccacCTCCACCGGCTCCTCCAATGCTGCCACAGTCTTTGCAACTAGCCATGCCACCGCGCAGCAGCGCTTTCAGACCAGTCGTCGCCGAGCAGTTTGCTGGGAAATCTTCGACAGGCGCTACCATTTGCGCTTATCCCAAATGGTTTGTGCCCTTATCCTTTCCAGTCACGATGAGTCATCTATCCAATCTGGCACCACGCTGCACACTACCCAACTGCAACTGCCTGGAGAGCTATCAATTTCACtag
- Protein Sequence
- MADDLVGQSQGQPNPKRARIAGNSKTLKPVETKTSNRVPKCARCRNHGIISELRGHKKLCTYKTCKCNKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKIDALPPGSIFGLTEQPISLAKPEQEPEALVVPQDLSGKRREHVSSTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPPAEQASVEQQLLLQPPPPAPPMLPQSLQLAMPPRSSAFRPVVAEQFAGKSSTGATICAYPKWFVPLSFPVTMSHLSNLAPRCTLPNCNCLESYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01320484;
- 90% Identity
- iTF_01324128;
- 80% Identity
- -