Sfla014610.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- dl
- Assembly
- GCA_003952975.1
- Location
- RKRM01000286.1:62783-76400[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7 1.1e+04 -4.0 0.6 144 153 30 39 14 50 0.44 2 4 1.5e-74 6.3e-71 237.6 0.0 1 169 57 227 57 227 0.99 3 4 4 1.6e+04 -7.0 6.6 107 107 497 497 437 531 0.56 4 4 2.5 1e+04 -3.9 2.7 114 137 613 635 593 670 0.58
Sequence Information
- Coding Sequence
- ATGTTTCCAAATCAAAACAGTTTGCccacagcagctgcagcaggcGAGGCGCAGCAACAAAACCTCAACTACAATGgcctgcaacaacagcaacaacaacaacagcagcaacagcagcaaactcAACAGTTAGCACAGTCGGCCAAGAATGTGCGAAAGAAACCTTATGTGAAGATAACAGAGCAGCCAGCTGGTAAAGCGCTGCGTTTTCGCTATGAGTGCGAGGGTCGCTCGGCTGGCTCCATACCCGGCGTCAATTCAACGCCCGAGAACAAAACCTATCCGACAATCGAGATTGTGGGCTATAAGGGACGCGCCGTTGTCGTCGTTTCCTGTGTCACCAAGGATACGCCATATCGTCCACATCCCCACAATCTGGTTGGCAAGGAGGGCTGCAAGAAAGGCGTCTGTACGCTAGAGATAAGCAGCGAGACAATGCGAGCCGTGTTTAGTAATCTGGGCATTCAATGTGTCAAGAAGAAGGACATTGAGGCGGCGCTTAAGGCTCGAGAAGAGATACGCGTGGATCCATTTAAGACTGGATTCTCGCATCGTTTCCAGCCGTCGAGCATTGACTTGAACTCGGTGCGTTTGTGCTTTCAAGTATTCATGGAGAGTGAGCAAAAGGGACGCTTTACATCGCCCCTACCACCGGTCGTCTCTGAGCCAATTTTCGACAAGAAAGCCATGTCTGATCTGGTCATCTGCCGGCTGTGCAGCTGCTCGGCCAGTGTGCTGGGTAACACGCAGATAATATTGCTGTGCGAGAAGGTTGCCAAAGAGGACATCACAGTACGCTTCTTCGAGGAAAAGAACGGCCAGACGTCCTGGGAGGCTTTAGGTGACTTTCAGCATACAGATGTGCACAAGCAGACCGCCATTACGTTCAAAACGCCCCGCTATCACACGCTGGAGATAACAGAGCCTGCCAAGGTTTTTATACAGCTGCGACGACCATCGGACGGTGTTACCAGCGAGGCTCTACCCTTTGAATATGTGCCATTGGATTCAGatccAGCACACTTGAGACGAAAACGTCAAAAGACTGGCGGTGATCCAATGCACTTGTTGcttcagcagcaacagaaacagcaacatcagAATGATCATCAAGATGGTAGGCAAAACAATATGAACTGTTGGAACGCACAGAACATACCCCCTATCAAAACAGAACCGAGAGATACCTCACCGCAACCATTTGCATTGTATCGTGCGCAACCAGAGTTGACACCCTCACCGCAGCCATTGTCGCCATCAAGCAATTACAATCAGAACAGCACACCGTCGCCGTATAACATGGCAGCGGCAGGTGTGGCAGCGCCTAACAATggtcagcagcagctgcaacagcagcagcaaatgcagctAATGTCACCCAATcatcaccagcagcaacagcaacagcagcagcagcaacaacaacagcaatatgcTGCTGGTGGCGCTGGCAACCTGGAATTGGGCAACAGCTACAACTCGTTTACACAACAACTGCTTgcacagcatcagcaacaacaacaacaacagcagcaacagcagcatcaacagcagccgcaacagcaacatcaactacAATATAACAACAATGGAAATCCCTTTGCTATCGCTGGCAACGCTGCGCATTGGGAAAGTAAATTCACAGCGGCTGCGGTAGCTGCGGCTGCTGTATCGTCGGCAGCACCAGCAGTTGTTAGTAACGGCAACAATCTTAGCAATCTCAATAATCCATTTACCATGCACAATCTGCTGACCTCAGGCGCGGGCGCTGCCAGCAATCTGCAATGGAATCTAACAACAAATCACTTGCAAAATCAGCATACtctgcagcaacatcagcagcaacagcagcagcaacatttgcaacaacaaGTGACGCCAATGCAACAGCAATACGACAGCAATGTTcccgtcaacaacaacaacaacaacaataacaacgacaacagcaacaacaataacaacaccaacaataacaacaacaacaacaacaataacaacaacaataatgagaACGGTCCAACGATTAGCAATCTGCTTAGCTTTGACAGCGAGCAGCTTGTTCGCATCAATTCGGAGGACCAGCAAATGTTGCGCCTCAATTCAGAAGATCTACAAATATCAAATCTATCAATATCTACGTAA
- Protein Sequence
- MFPNQNSLPTAAAAGEAQQQNLNYNGLQQQQQQQQQQQQQTQQLAQSAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTSWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSDPAHLRRKRQKTGGDPMHLLLQQQQKQQHQNDHQDGRQNNMNCWNAQNIPPIKTEPRDTSPQPFALYRAQPELTPSPQPLSPSSNYNQNSTPSPYNMAAAGVAAPNNGQQQLQQQQQMQLMSPNHHQQQQQQQQQQQQQQYAAGGAGNLELGNSYNSFTQQLLAQHQQQQQQQQQQQHQQQPQQQHQLQYNNNGNPFAIAGNAAHWESKFTAAAVAAAAVSSAAPAVVSNGNNLSNLNNPFTMHNLLTSGAGAASNLQWNLTTNHLQNQHTLQQHQQQQQQQHLQQQVTPMQQQYDSNVPVNNNNNNNNNDNSNNNNNTNNNNNNNNNNNNNNENGPTISNLLSFDSEQLVRINSEDQQMLRLNSEDLQISNLSIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00554168;
- 90% Identity
- -
- 80% Identity
- -