Basic Information

Insect: Scaptomyza cyrtandrae
Gene Symbol: -
Assembly: GCA_035044605.1
Location: JAWNNS010000640.1:6487867-6494253[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.048 3.6 8.3 0.2 1 23 1344 1367 1344 1367 0.94

2 13 4.4 3.2e+02 2.2 0.2 1 23 1535 1557 1535 1557 0.91

3 13 0.00017 0.013 16.0 2.7 2 23 1560 1581 1560 1581 0.97

4 13 6.7e-05 0.005 17.3 0.2 3 23 1589 1609 1587 1609 0.98

5 13 5.6e-07 4.1e-05 23.9 4.1 2 23 1616 1637 1615 1637 0.97

6 13 5.3 3.9e+02 1.9 0.4 5 23 1650 1668 1648 1668 0.96

7 13 1.3 97 3.8 5.4 3 23 1675 1696 1673 1696 0.93

8 13 1 76 4.1 0.2 2 23 1707 1727 1706 1727 0.95

9 13 5.3e-05 0.004 17.6 0.4 1 19 1733 1751 1733 1755 0.95

10 13 1.5e-05 0.0011 19.3 0.5 1 23 1763 1785 1763 1785 0.98

11 13 0.0001 0.0074 16.8 7.6 1 23 1791 1813 1791 1814 0.96

12 13 0.00019 0.014 15.9 5.9 1 23 1819 1841 1819 1841 0.98

13 13 0.028 2 9.1 8.2 1 23 1847 1869 1847 1870 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.048	3.6	8.3	0.2	1	23	1344	1367	1344	1367	0.94
2	13	4.4	3.2e+02	2.2	0.2	1	23	1535	1557	1535	1557	0.91
3	13	0.00017	0.013	16.0	2.7	2	23	1560	1581	1560	1581	0.97
4	13	6.7e-05	0.005	17.3	0.2	3	23	1589	1609	1587	1609	0.98
5	13	5.6e-07	4.1e-05	23.9	4.1	2	23	1616	1637	1615	1637	0.97
6	13	5.3	3.9e+02	1.9	0.4	5	23	1650	1668	1648	1668	0.96
7	13	1.3	97	3.8	5.4	3	23	1675	1696	1673	1696	0.93
8	13	1	76	4.1	0.2	2	23	1707	1727	1706	1727	0.95
9	13	5.3e-05	0.004	17.6	0.4	1	19	1733	1751	1733	1755	0.95
10	13	1.5e-05	0.0011	19.3	0.5	1	23	1763	1785	1763	1785	0.98
11	13	0.0001	0.0074	16.8	7.6	1	23	1791	1813	1791	1814	0.96
12	13	0.00019	0.014	15.9	5.9	1	23	1819	1841	1819	1841	0.98
13	13	0.028	2	9.1	8.2	1	23	1847	1869	1847	1870	0.95

Sequence Information

Coding Sequence: ATGGTGGACAGTGTGCAGTGCCCCGTGTGCACTTTGTATTTGCATGCGGGCATGAATCTCTCCGATCATTTGGAGACACATCCCAAGGAGCAGGTCATTAAGGCACTGGTGCAAATGACCATTTCTGGCAACCCTGGCGGACTGGAAAGCGCCCTGGCGGCAGCTGTGATATCAAGCAGCAAActcagcagcagtagcaaaaaCGCTGCCTCAACAGAAAGCGCTACCCCAACTCCAGCTGCTGACATCAAACCAGATGTTGCTCCAATAGCACAaacaccaaaacaaataacacaaccaccactaccaccgccaccaccaacagcagcatcagcaacaaccacaacgcaATCAACAGCACCCAAAGCTGTCGCATTGCTGGACAACgccagcaacagtagcaacaacagcaacaacaacaaattgaacaatCCACCGATTAAGGCAGTGAAAAGCGCGCCACCCACGACTGAGGCGCCAGCCACCACatccaataacaacaacaacaacacacccACCATAAGCAGCGTGGCCGCTGTCTATCCGGCAGCCCTGGCAACAGACTATCGTtacgaacagcaacagcaacaacaacaacagcagcagcaacagctgcatgGCTTTCCACGTGGCACAACCACCACACTGGTGATACCACAAGCGCCACAGCAGCACCATAATTTCTTGGCCAACCAACAGCCGCCTGCGCACTTCGCTcttcagcagcagccgcagcaacagcagtcgaCCATGAAGTTTACAGCAGCGCTTCTTCCGCCTCCTTTGCAGCTTTTTGCACAGCAGCCGACGTCAACGCAGCCGCATCAGAAACCTCCACCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAgcacaaccaaaacaaacaacaacatcaaaaccaacaccaacaccagcagcaacaacaacagcaacatattAATGTACAACAACATACCGTAAATGTAGCACCACCGAGTGGCAAACAACATAGCAACAAAATCCAAACAGATTTCTTTCTGAATCCACCTCCACCGCCACAACTAACAATTCCATCAACATGTTCTGCGTCTTCGTCATTATCGTTATCGTCAGCGTCGACCTCCTCTCGACTGCAGCATccccaacagcagcaccagcaatcGCATGCagctagcagcagcaattaCGCAGCTGCCAGCTGTTCCAGCTCCTCGGTAGCTTTAATGTCCGCCACAACGTCTGCACGAGCCACTAGCCGTCAGTCAAGTAATTCGCCCTTTGGTGCACTGCTTAATGCAGCGGCTCATGCTGCCTGCTCTTCACCCGCCGCCTCCACTGGAACGTCAGTGCTGCGCTACGCCGAGTCGCCAGTGGCTCACTATCTGGAGCGCGAGAATGGGGATTTCATAGTGCAAGAGACGCCAAAACACATTGTGGAGTGTGTCGAGAAAGATGATGGAGAGTTCTCGGTAATTGAGCGCATCTATCAGTCACCACCCAGTGTACTCCACAtacacgacgacgacgaagatgaagaggaggaggagcaggaggaAGAACAGGAAGATCAGAGTTGGGCAAACAGCGATGATGAGAATGAGAATCACGCTAAAGTGTCACTTGGACATGTCGAGGATGGTGACGATGAGCACGAGGATAGTCGCAGCCGTGTTGGCCCCAAAACCACAACGAAAAAGTCACGCAAGCCAAAGTCGAGTGGCAGAATACACAAACAATCTACGAAGCATCAGTTGGGCACGATGGCGGACGAGGATGACTTCATGAGCATTGGAAGTAGTTGTGCCGAAAGCGATCATCAGCCAGAggagcatcagcagcagcaaccagcgcagcagcagcagccgccgcaacaacagcatcgacAACCGTCATCGTCGACTGCGGCACAAGTTGAAAACGCATTGCCAATGCAACTTTGCACGGCGCCTTCCACAAGCAGTGGAGCAGCTGGCACTTGTTCCCCGAGCAGTTCGAAGTTCACAGGCAGCGGCACCATCAAGTCCAAAAAGAATCGAGTGACGGTGCTCAGCGATGTGCCGCTCAACATGAACGAGTATTTGGATTTGGTGGGCAACATTGTGGCCTCAAGTCGCATTGGCGCAGCACGCCCTTTTGCCGCTGTGGCGCCCATACCGTTGGTGAAGGTGGAAAAGGAGGAGCCAATGGACGAATACGATGCCGATCCAGTGGATATGCAGTTGGAGCAAAAACCCAACCTGGATCATACCAGtggtagcagtagcagcaatagcagcagtagTGGTCATGGCACCACTAGCGTCATACGCATGGCCAGCACCAGTGCAAATGTTGCAGCCGAAGATCTCACACAGCCGCCGCACATGAAAGTGGAGGTGGAGCCAACGGCACTGTTGCCACAACGCTTCTCGGCGCCCGGTCAGCTGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGTAACAGCAATGGCAACGTccacaacgacgacgacgaaaaaGACTGATAACAAAAACGCTGCCGGTAGAaatagtagcagcagcaatagcaatagtaATTGCGCCGAATCCCACAGCATATCAGCAAATACGCCCGCCGAGCTTGTGCAGATCAAGAACGAGAACGTTGAAGCTGCCACATCCAATGGCAGTATATTGGAAAAGCATCTGACCAACAGCTATGTGGCACAGCAGGCACGCAAACACTCTGCCGTCAACGATGATGATGCACGTGTGCTGCTTGAGTTTGCCAACTCCAAGCAACTGCCATTGCCAGGCACGAGCAATCATACAACGTTTGTGGTGAACGCAGCCAGTTTTGCGTCAGCGGGTTCCGTATTTGCCACAAGCGGGAGCACCATCAGTGGCAGTGTGCATAAGTCAACCAAGTCGGCCGATGAATACATTCTGCCAGATGACACTAAATTGGAGGTAGATGAAATTATGATATCCTCCTCGTCTTCCTATGCATCCACCTCGCAACAGCAGCttctgcaacagcaacaacaacagcagcagcagcaacaacaacaatctttGCAACAGGCGCATCCGTCCGCCTTCactgattttaattttctgtaccaccaacacacaacagcagcagcagctgcagcaacaacaacaacaacaactgcttcCAACTTTGCACCATTTGGcattcaacagcagcaatcgctgcagctgcaacatccACAGCATGGCTCCAGCGAGGCAACTAATGCGGCAACGCTTGCTTCCTCCAGCAATTCGTCTGCCTTGGATCAGGAATGCTCGATGAATGCCACTTTCCGTGTGGCCAAGCCACCATCAATGCTAAGCGGTTGGTATCAAccgcatcagcagcagcaggcaacgACTTCGTCTCACAGTTCGCATGTGGAGCAGCCCAGCAATTTTATTGCAGCTCTATCCGCTGTCGACTGCTGCAATGCAGCCGTTGATAGCGATATCAGTGAGGCCAAGTACTTGGATCTGGATGCCTGTAAGCGGGAACAGCTTAGTAACAGTAGCACCCATATGCCCTCTGCATCCACCACATCGTCATCGTTTCAAGCCGCTGCAACGGAGAGCAGTCTTGTTGGTGGTCTAGGTCTCAATATACGTACCGATGAGAAGATGCCCGCCAAGGGTGAAATATCCGAGCAGGAAAGCAACTGCGACATTGAGAACTCCTGGAGTCAATCGATGTATGGGGACATATCACAGCGTTACTTTAGAAATCAATTTACGGATGGCTACAATCAGCAGCTGGCCGATTGGCGTCATGATTACTATCCGGCGCAAGATCTCAGTGGCCAACAGAGGGAGCCAAAGCGCTTTGACTTTAACGCGGTCGCCTCGGAGTACGCACAGCCGACAGAGCTTGAAGCTTCCTTAAGCTTAACTAGAAACAATCATTTGTTGGATGCACAGCCCACCACTTCCTCATCGTCATCGGCATTGCTGGCTGGTCCACCAATAGCCTCGACATCTCGCGCTGCCGCCGAAGCGGAGGCAGTTGCAGCAGCGCTGGCGCAACGAAAGCCACCACGTCGCAAGATCTACAAGTGTCCGCACTGTGTGGCTATCTTCGAGAAGCTAAAGGAGCGCAATGCCCACATGATTGGTGAGCACAACTATGTGCGTCAGAATCGTCGGCTCATCTGTACACAAGCGCTGGTAAACGCTGCGATGCTAGTACAGCCGCAGGTTCAGCAGACAGAACAGCAGctagagcaacagcagcagcaacagttgctgcaggCGGGGCACAGCCCAAGCGGTGCTGTACACGAGGATTCCAAGGATGGTATTGTGAAGATCAAGCAGGAGAACTGTCAGGATAAACACGATTCAGCCTCGGAACAGTTGCTGGGACACGTAGAGTTGCCGGATGTCAAGGATGCTGTGCTGCTCGTTACCAGCGGTGAAAGCGCTCGCGATGCGGACATGAAGCCACCAACCAGCGTAACTGATCTGGACGAAAAGCCAGCCATAGCACCGCTGGCCATGACAACACCAGCTGCCAAGTTGGCGGCTCTGTATCGCATGCTTATAGCCTACAACGAATCGAAGCTGGGCCAGGACCGCAACAATCTCAGCGAACTAGAGCAAAAAGCCATGGAGAAATCTATATTCTTGTGCTACATCTGCCGCACCGATTTTCCCTCTGTCAAGCTGTACGATGCACATCTAACGGAACATCCGGCCGAGTGTTTCACGTGCGGCAAGAAATTCTATCGTTGGAAGAACTTTTCGCTGCATCTGAAACGGCATCTGGGCTGGAAGGAGTTCGGCTGTTATGTTTGCGACAAAAAGTTCGTAGTGCGCAGCGCTCTCGTCGAGCACATGCGCATGCATACTGGCCAAACACCACTCAAATGCAAGATATGTGGTAAAAAGTTCAAGCGGTATTCTAACTTGACGCAGCATCGCAAACGCCACACAAAAATGACAGTGCGCAAGAAGGAATATGTGTGCCACTGTGGCGAGGTGTTGCCGTCAAAGGCGCGCTTCCTATGGCATAAGGAGACGCATGACTTAAAGCCCAAATGCTGTCCGTACTGTTGCGATCGTTTTGTGCATGCCAACTCTCTGCGTCGACACATTCGATTGGCGCATTCGGATAAGTTTGACTATGCTGAGCCCATGGAGTGTGCCATGTGCAAACAGATCTTTGCCAAGACATCGATAAAGGCGCATATGGCGACGCATTCGACGGATCCGCAATACGACTGCGCTATTTGCAACAAGAGCTTTTCCACCAAATGGAATCTCAAGATACATTCGTGGGTGCATGCGAATCGTACAGCCAAACCATTCAAGTGCGAGTATTGTCCTAAGGCATTTGTACGTGAATTGGACTTTAAGAACCACATGAATGCGCACAAGCAGATCAAACCCTACACCTGCGAGTATTGTGGTTGCAAGTTCATACGCAAGTACAACTATATGCGGCATCGACGTGAGCATCATGGCAACAAGAAGTTTACGTGCGATCAGTGCGACAAGTCTTTCCATCGACACTACTATCTGATTGAGCATCGGCGCATTCACACTGGCGAGCGACCGTTCCACTGCACCATTTGTGGCAAGAGCTCGACCACGAAGACCAATCACAACAAACATCTAAAAATTCATCATTCGCGGGATCCTTTCACTGTGGAGGTCTAA
Protein Sequence: MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTISGNPGGLESALAAAVISSSKLSSSSKNAASTESATPTPAADIKPDVAPIAQTPKQITQPPLPPPPPTAASATTTTQSTAPKAVALLDNASNSSNNSNNNKLNNPPIKAVKSAPPTTEAPATTSNNNNNNTPTISSVAAVYPAALATDYRYEQQQQQQQQQQQQLHGFPRGTTTTLVIPQAPQQHHNFLANQQPPAHFALQQQPQQQQSTMKFTAALLPPPLQLFAQQPTSTQPHQKPPPAYGAAISQIRSQHNQNKQQHQNQHQHQQQQQQQHINVQQHTVNVAPPSGKQHSNKIQTDFFLNPPPPPQLTIPSTCSASSSLSLSSASTSSRLQHPQQQHQQSHAASSSNYAAASCSSSSVALMSATTSARATSRQSSNSPFGALLNAAAHAACSSPAASTGTSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEDEEEEEQEEEQEDQSWANSDDENENHAKVSLGHVEDGDDEHEDSRSRVGPKTTTKKSRKPKSSGRIHKQSTKHQLGTMADEDDFMSIGSSCAESDHQPEEHQQQQPAQQQQPPQQQHRQPSSSTAAQVENALPMQLCTAPSTSSGAAGTCSPSSSKFTGSGTIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPMDEYDADPVDMQLEQKPNLDHTSGSSSSNSSSSGHGTTSVIRMASTSANVAAEDLTQPPHMKVEVEPTALLPQRFSAPGQLRGPKKLVIKPKVTAMATSTTTTTKKTDNKNAAGRNSSSSNSNSNCAESHSISANTPAELVQIKNENVEAATSNGSILEKHLTNSYVAQQARKHSAVNDDDARVLLEFANSKQLPLPGTSNHTTFVVNAASFASAGSVFATSGSTISGSVHKSTKSADEYILPDDTKLEVDEIMISSSSSYASTSQQQLLQQQQQQQQQQQQQSLQQAHPSAFTDFNFLYHQHTTAAAAAATTTTTTASNFAPFGIQQQQSLQLQHPQHGSSEATNAATLASSSNSSALDQECSMNATFRVAKPPSMLSGWYQPHQQQQATTSSHSSHVEQPSNFIAALSAVDCCNAAVDSDISEAKYLDLDACKREQLSNSSTHMPSASTTSSSFQAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFTDGYNQQLADWRHDYYPAQDLSGQQREPKRFDFNAVASEYAQPTELEASLSLTRNNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQALVNAAMLVQPQVQQTEQQLEQQQQQQLLQAGHSPSGAVHEDSKDGIVKIKQENCQDKHDSASEQLLGHVELPDVKDAVLLVTSGESARDADMKPPTSVTDLDEKPAIAPLAMTTPAAKLAALYRMLIAYNESKLGQDRNNLSELEQKAMEKSIFLCYICRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECAMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00583141;
90% Identity: iTF_01328069;
80% Identity: -