Scyr001734.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- DMRT2
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000166.1:236172-238196[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-24 2.6e-20 72.1 16.3 1 47 19 65 19 65 0.99
Sequence Information
- Coding Sequence
- ATGCAGTGCAGTTTGCCCGCGAATGTTATCAGCTCTAAGGAGCGTCGCTTGCTCCGTACGCCCAAGTGTGCCCGCTGCCGCAACCATGGTGTCATCTCGTGCGTCAAGGGCCATAAAAAGTTGTGTCGTTGGCGCGAATGCTGCTGCCCCAACTGCCAGCTAGTGGTCGATCGTCAGCGTGTGATGGCCGCTCAGGTGGCGCTGCGACGCCAACAAACAATGGAGGCGCTGGAGAGCAGCACCGGCACCAGCAGTAACGAAACATCGAGCACAGCTGAGCCACACAGCGATGAGGAGCTAATGCCTTCCACCACATTGAGCACGCCCACCAAGTGCAGCTCCTCGATGGCAGCAAATACGTTGCGCACGCGCCAGGCTTTGATTGCCCAGAAGCGCATATACAAACAGCGACTGCGCAACCTGCAACAGTCCACGCTACACATCACTGCAGCCATGGAAGAGTATAAGCAGCGTTTTCCCACGTTGAATTCACCGCTACTGGAACGCATGCGCAAGCGACGAGCGTTCGCTGATCCGGAACTGAACTATGCAATGGATACAACGCTACTTGGCAGCTCCGCCTGTGGCGTCACAGCATCCCCTTTGCCAACGCCGCCAACAGCAATTGGTAACGCCTTTTATGATCTGTTGGGCAATGCCGCTTGCAATGCCGTTGcagttgccgctgctgctgcatcatCAGCAGCTGTCGCACAACAGCATCACCAGATTGCATATTCATCAATGCCGCATTTTACAAACACACCCGCGCCACCGCCCACTGTCAAAAAACCAAAGTTGAGTTTCTCAATTGAATCGATAATCGGTATAAGTACGTAG
- Protein Sequence
- MQCSLPANVISSKERRLLRTPKCARCRNHGVISCVKGHKKLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALESSTGTSSNETSSTAEPHSDEELMPSTTLSTPTKCSSSMAANTLRTRQALIAQKRIYKQRLRNLQQSTLHITAAMEEYKQRFPTLNSPLLERMRKRRAFADPELNYAMDTTLLGSSACGVTASPLPTPPTAIGNAFYDLLGNAACNAVAVAAAAASSAAVAQQHHQIAYSSMPHFTNTPAPPPTVKKPKLSFSIESIIGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322664;
- 90% Identity
- iTF_01320486;
- 80% Identity
- -