Scyr007299.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza cyrtandrae
Gene Symbol
ct
Assembly
GCA_035044605.1
Location
JAWNNS010000639.1:7216928-7255564[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-26 6.9e-23 80.5 0.0 3 72 1207 1277 1205 1282 0.95
2 3 1.1e-31 6.8e-28 96.6 0.0 3 77 1699 1774 1697 1776 0.96
3 3 6.6e-31 4.2e-27 94.1 0.0 3 76 1979 2053 1977 2056 0.96

Sequence Information

Coding Sequence
ATGTGCCGCGCGCACGACtcgcagcagtggcagcaacagcaacagcagcagcgattgAGATTGAGAGCGTTGAGAGCTAGGGTTGCGCGCGCTACACTAGCCGAAAAGGAAGTGAACACACTCAAGGAGCAACTATCCACAGGCACGCccggcagcaacagcgacaacaacagcagcaacagcgacaacaacagcagcaacacaacagcagcagcagcagcagcaacagcagcagcagcatttgccAGCGGCGAAGAGGAAGCCACTGGGAACAGTGAAAGTGAGAGCGACAAGCTGTTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAGCGctgagcaacagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGCGGCGCCTGTTTAAATCCAAAGCTCTTCTTTAATCACGCACAGCAAATGATGATGGAAGCGGCAGCGGctgcggcggcagcagcggcagcggcagcacaacagcaacagcagcaacaatcgcCAATGCATTCGCCCATTGctgccaccaacaacagcaacacacaagcaacagcaTTAGCAggagcaactgcaacagcaacagtagcagcggcagcaagTGTAGCTGCAACACAACACCAATCGGCACGCGATGCTGCTAATGCAACATTAActagcaattgcaacaacgccgaggacgatgatgatgaggacgaCGATGAAGAGGAGGATGCATCGATGCAATCAAATGTGGCGCATGCCGATGGTGATctagatgatgatgatatggAATTGGAGCCGGAgaatgttgctgatgttggcGCTAGTGTTGCTGCCGTCAAGGCAACATTGGCAACAAGAACTGATAGCGATGTGAATGCAACgcataataatgataatgatgatgatgatcatcatcagaatgttaatgatgatgatgaggatgttGCCGATGTGGCTAACGATGGGCATGAGGATGATGAGGAAGCTAGTTTAAATGTTAGTAGCaataatcacaacaacaacaacaacaccaatacgGATAGAAACAATAGCTGTAGTCAAAagtcgaacaacaacaacaacaacagcagcagcaacaacagtgaaacgcaacatgttgcactgcgtgataataataatgttaatgaGCAACATGTTGCACATAGCGCTGAGGACGATGATTGCACCAATAACAATactaacaccaacaacaacaataacaacagcaacagcaatgagAAACGCAAAAAGCGCaacgccaacagcaacaacaacaacaataacaacaacaacaacaatcagccTGCTGTTCTATTAGCTGCCAAAGACAAAGAGGTAAGCATCATACCATCAACGCATTCATCGCTGGCAAGCATTAAAGCACTTTTAAATGAGTTGCAACGCTTGCGTGGTCTGGAACAAACTCATCTCATACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCATATTATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATCAATGAGGCACTTGCTGAGGCAACTgcattggctgctgctgttaatgctgctgcaacgaacatcaacattaacaacaacaacaacaacaataataacaatagcagcagcaacaacaacaatcacagcagccaaagcagcgACAACACCAATGAGTTGAGCGCAGtgttcaaaacaacaacagcaacaacaacaacagatctTACTACATCGACCCATCAGCACaatgacgatgatgaggatgacgatgataataataatgatcatgatcatgatcatgagGCCGAGCTGCGTGATGCTGATGACGATGAGGAGGAGGATACGGATATGGCcaacgagcaacaacagcagcagcaacagcaacatgcagCTATTACCAACAATCGTCATGATGATGACAACGATGATAagaacgatgatgatgatgatgaggaggaggagcaggaTGCCGATATGTCCAACGCCACAGGCACAGCGGACAACAATGAGCtaaatatcaaaaaagaacaacaCAGTCCATTGGATCTGAATGTGCTCAGTCCACATTCGGCTATTGCCACAGCTgcggcagccgcagcagccgcagccgccGCTGCCTGCGCCAACGATCCCAACAAATTCCAAGCTTTGCTGCTGGAACGCACTAAAGCCGCACTTGCCGCCGAGGCGCTCAAAAATGGCGCCAGCGATCCAACAAATGCCAGCAGTGATGAAATgccgcaacaacaagcagcagcagtcgcttCAACACCAACTAATCAAGTTAAAGATGATCAAGCacaagaagatgaagatgcacaagaagaagaagttgataaagcagcaacagttacAGCTACAGCCAATCCAGAAACAAGCACTTACGTTGAGGAAACGAGTGAAATTAAAACATTGAGAGCCGAGGCCAATTTGCAGCCCAAAGTTGAAATCATTGACACAGAAGACGATGCTGAAATTGCCTCTGGCCAAACACTGGAAGAACAGCTGGTCAATAGCTATTGGCGGCGTGGCTTTGAAACAGCCACACCAGCAACAGATACAAAActagcaccaacaacaacagcagcagcagcagcagcaacaccaacaatagctgcagcagcaactggaaGCAAAACGCCAACAATTTATCAAAATGCCAATGCGGTgcagcagcaattgttgccgccaccaccgccgccaccgctgccgccgtcacaacaacaacaacaacagcagcagcacttttctgcccagcaacaacaacaacaatatcatcaacaacaacatcagcatcagcagcaacatggaCCTTCGTCCACAGTGCTGCTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGACTAGATGCCGCAGcccagcaccaccaccaccatcagcaccaccagcaacagcagcagcatcagcaacagttgcatcagccacagcaacatctccttaacagcagcaatagcagcaacagcaacagcagcgttACCGGCAACGATCCACTGAATCCGCATCTGCATCATGCGCATCATCATGGCCATCCACATGGACAGCTGTTGCATGCAGCGCATCATCTGCATCATGGCGCCGACTCCAACTCATCAAGCGCCACAAGTACACCAAACAGCACCGCCCAGCTAGCAGCAAGCATTGCCAGCACACTCAATGGCAACAAGTCACTGTTGCAGCATGCAGCAGCCGTTGCCAATGTtgaggacaacaacaacagtttgacACCGAATGCAAATGCGGCTGTTGCCGCTGCAGCGATGGCTGCCAATGCACAGCATGCGGCCGCTTTTCTACCAAATCTGCCCAATTTTCCCAGCCTGCCAGCGTTTCAATTTGCAGCCGCAGCTGCCGCTGGCCAGGAAGCACGAGCACATTTTCGCTTTGCGGACGCCGAGTTGCAACTGCAGCCGGGCGTCTCGATGGCTGGCCGTTTGGGTGAATCGTTGATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTTCGCTACAACATGGACAAGTATGCGAATCAGGCGCTAGACACTCTCCATATCTCGCGACGCGTTCGAGAGTTGCTTTCCGTTCATAATATTGGACAGCGACTGTTTGCCAAATATATTTTGGGCCTATCACAGGGCACCGTCTCGGAGCTGTTGAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGTGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTCCTCAAATCCCTCATACCTAAAAAAGATTCGGGACTGCCACAGTATGCTGGACGCGGCGCTGGTGGCGATGATTCCATGTCCGACGATCGTCTCGCACACATTCTCAGCGAGGCCTCCTCCCTAATGAAGAGCAGCGCAGTCGCtgtacagcagcagcagcaggagcatcaACGTCGTCATGCCGGCGACGATACGCACAGCAATGAGGATAGCAAGTCGCCGCCGGAAAGCTGCAGCTCCCCCTTCTACAAGGTTGAGCAGCAGATCAAGCAtctgcagccgcagcagcagcaacagctgcaacatgtCTCGGAGCATGCGCAACGCGAGCAGCGTGAAGCagccgccgctgccgctgccgttgccgtacaccagcagcagcagcagcaacgggaGCAGCGCGAGCAGCGCGAACAGCGGGAAGCAGCGCAGCgtgaacagcagcaacgtaTTCGTCACGAGGATCTGGCACAGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACACGTACACCCCGTGAGGCAGCCTTTCCAGGATTTTTGTTGTCACCGTTCTTTGGAGGTGCGGCTGGCATGCCTGGAGCACCCGCCAATCCATTCCCCACAGCAATGGCCGCCGATGAGAACATGCGACATGCCTTGGAGCGTGAGATAGCcaagctgcaacagcagcaggcccAGCAGGCACAGCAAGCCGCCGGTTTTCCAAACTTTTCCAGTTTGATGGCACTGCAACAGCAGGTGCTGAACGGTGCACAGGATCTGTCGTTGGCCAGCAAGGAGATCAAGCTGAATGGCCAACGCTCATCACTCGATCAGcacagcggcggcagcagcagctgctccaAGGACGGCGAACGCGGCGATGACCGCGATGATCGCAGCTATCCAGCCCTGTCGCATGCCCGCAAATCGGAGGGCGGCAATACACCAGCACcgccagcaccaccagcagTAGCCGGTGCTGCTGGAGGTAATAGTAATTCCAGTGCTGGTGGTGGAACCACCGTTACCACTGGTGGCCATGGCAGCAATTCAGCAGCACCCAGTCCACTGAGCAACTCCATACTGCCACCGGCATTAAGCAATCAGGGTGAGGAGTTTGCCGCGACGGCCAGTCCGCTGCAGCGTATGGCATCGATAACAAATTCGTTGATCACCCAGCCGCCAGTGACGCCGCATCACTCGCAGCCACAGCGGCCCACCAAGGCGGTGTTGCCACCGATCACACAGCAGCAGTTCGATATGTTTAATAATCTGAACACCGAGGATATTGTGCGCAGGGTTAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTGTTTGGTGAGTCAGTTCTGGGTTTGTCGCAGGGTTCGGTGTCGGACCTGTTGGCGCGACCCAAGCCCTGGCACATGCTCACGCAGAAGGGACGTGAACCGTTCATACGCATGAAGATGTTCCTGGAAGATGAGAATGCGGTGCATAAGCTGGTCGCCAGCCAATACAAGATTGCGCCCGAAAAGCTTATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCACAGGGTTTGGCCAACAAAATGCAGGCCACCCTGCCTATGCAAAAGATGATGAATGAACTGAAGCTTCAGGAGCCCGCCCAGGCCCAGCACATTATGCAACAGATGCAAGCAGCGGCTGCCATGTCCGCAgccatgcaacagcaacagcaggcagcTGCCGCTCAAGCAGCAGCCGTTCAACAGGCCCAGGCGCAAGCTCAGGCCCAGGCCAGTCAGCATCAGCAGGcccagcaacatcagcaggcccagcagcatcagcaggcACAGCAGCAGGCGCAGGCCCAGCTTTTGCATCATCAGAACATGCTGTTGACATCGCCAGGTTTGCCACCCCAACATGTCATTAGTCTGCCGGCAGCGGTGACGCCCAGTGGTCTTCAAAGTGGTGCCGGTAATCCTGCAACAGTTGGCGGCACGCCCAGCAGCAATGAGAAAAAGCCCATGATGATGCCCGTGCTGGGTGGCGCACATGCACCCAATGCCATGCGCAGCCTGCATCAGCATATGTCGCCCACGGTTTATGAGATGGCTGCATTGACCCAAGATCTGGATACGCATGATATAACAACGAAAATCAAGGAGGCTCTGCTTGCTAACAACATTGGTCAAAAGATCTTTGGTGAAGCAGTGTTGGGTCTGTCGCAGGGCTCCGTTTCGGAGCTGCTTAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAGCCCTTCATTCGCATGCAGCTGTGGCTCAGCGATGCTAACAATGTCGAGCGTCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGTAAGCGGCGTCGTAGCACTGGACCCAATCAACAGGACAACAGCAGTGATACGTCCAGCAATGATACAAATGATTTCTATACGAGCAGCCCCGGACCGGGTTCGGTGGGTTCTTCGGTTGGTGGTGCACCTCCCAGCAAGAAGCAGCGCGTTCTCTTCTCCGAGGAGCAGAAGGAGGCATTGCGTTTGGCCTTTGCACTCGATCCATATCCTAATGTTGGCACCATTGAGTTTCTGGCCAATGAACTGAGTTTAGCGACCCGAACCATCACGAACTGGTTCCACAACCATCGCATGCGACTCAAGCAGCAGGTGCCACACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCCACACCCTTCGATCCCGTCCAGTTTCGCATACTGTTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGTTTGAGTGGTGCGCCCATACCCTACCCACCGTATTTCGCAGCGGCTGCTCTACTCGGACGCAGCCTGGCCGGCATACCGGGTGCGGCGGCGGCTGCTGGGGCAGCAgctgcggcagctgctgcagttggCGCAGCCGGCGGCGATGAGCTCCAAGCACTGAATCAGGCATTTAAGGAGCAGATGAGCGGTTTGGACTTGTCGATGACAACGCTGAAGCGTGAGCGCAGCGATGACTATCAAGATGAGCTCGAACTGGACGCCAGCGGACACAATATGAGCGACAACGAGTCCATCGAGGGTGGCTCCCATGAACCGGAGCACACACCCATTTCCGATTACGAGAAGGCGCTGCAGAAATCGGCACTTGCCTcggcagccgcagcagctgcGTATATGAGCAATGCGGCGCGCAGTTCACGTCGCAAGCCGGCGGCGCCACAGTGGGTTAATCCGGCTGGTGCCACCACGCCAACGGCAGCTGGCGTTGTTGCCAATAACGCTACCGTtgacagcaacaccagcagcggcggtggcggtggcggcggcagtGAGCGCATTATCAATGGCGTCTGTGTCATGCAAGGCTCCGACTACAGTCGTGAAGATGGTGACGAGGGTGTCAAAGGTGACAATGCCTCCTCcaatgctgctgatgctgagcATGAGGAGGATCATGCACATTTGGAGATTGAGCAGCGTTTAATGGAGCCTGAGGTGCGCATTAAACAGGAGGAGGATGATGAGGAGGAACAAacgcagcagcaccagcaccagcagaaGCTGTTGGACGATGGCGCGCCTTTGGACAGCGATGCGGAAAAGCAGCTCAAGATGATCAACGAGGAGAAGCTGCGTCTAGTGCGTGTGCGGCGCCTCAGTAGCAATGGCGATGCCGACGAGGCGAGggcggctgcagcagctgtaGCAGCTGTTGCGGCAGCgacgcaagcagcagcagcagcggcgtgGAACTATTAA
Protein Sequence
MCRAHDSQQWQQQQQQQRLRLRALRARVARATLAEKEVNTLKEQLSTGTPGSNSDNNSSNSDNNSSNTTAAAAAATAAAAFASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAQQQQQQQSPMHSPIAATNNSNTQATALAGATATATVAAAASVAATQHQSARDAANATLTSNCNNAEDDDDEDDDEEEDASMQSNVAHADGDLDDDDMELEPENVADVGASVAAVKATLATRTDSDVNATHNNDNDDDDHHQNVNDDDEDVADVANDGHEDDEEASLNVSSNNHNNNNNTNTDRNNSCSQKSNNNNNNSSSNNSETQHVALRDNNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNSNSNEKRKKRNANSNNNNNNNNNNNQPAVLLAAKDKEVSIIPSTHSSLASIKALLNELQRLRGLEQTHLIQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNININNNNNNNNNNSSSNNNNHSSQSSDNTNELSAVFKTTTATTTTDLTTSTHQHNDDDEDDDDNNNDHDHDHEAELRDADDDEEEDTDMANEQQQQQQQQHAAITNNRHDDDNDDKNDDDDDEEEEQDADMSNATGTADNNELNIKKEQHSPLDLNVLSPHSAIATAAAAAAAAAAAACANDPNKFQALLLERTKAALAAEALKNGASDPTNASSDEMPQQQAAAVASTPTNQVKDDQAQEDEDAQEEEVDKAATVTATANPETSTYVEETSEIKTLRAEANLQPKVEIIDTEDDAEIASGQTLEEQLVNSYWRRGFETATPATDTKLAPTTTAAAAAATPTIAAAATGSKTPTIYQNANAVQQQLLPPPPPPPLPPSQQQQQQQQHFSAQQQQQQYHQQQHQHQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAAAQHHHHHQHHQQQQQHQQQLHQPQQHLLNSSNSSNSNSSVTGNDPLNPHLHHAHHHGHPHGQLLHAAHHLHHGADSNSSSATSTPNSTAQLAASIASTLNGNKSLLQHAAAVANVEDNNNSLTPNANAAVAAAAMAANAQHAAAFLPNLPNFPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSDDRLAHILSEASSLMKSSAVAVQQQQQEHQRRHAGDDTHSNEDSKSPPESCSSPFYKVEQQIKHLQPQQQQQLQHVSEHAQREQREAAAAAAAVAVHQQQQQQREQREQREQREAAQREQQQRIRHEDLAQDKMARLYQELMTRTPREAAFPGFLLSPFFGGAAGMPGAPANPFPTAMAADENMRHALEREIAKLQQQQAQQAQQAAGFPNFSSLMALQQQVLNGAQDLSLASKEIKLNGQRSSLDQHSGGSSSCSKDGERGDDRDDRSYPALSHARKSEGGNTPAPPAPPAVAGAAGGNSNSSAGGGTTVTTGGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQQHQQAQQHQQAQQQAQAQLLHHQNMLLTSPGLPPQHVISLPAAVTPSGLQSGAGNPATVGGTPSSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMTTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPISDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGATTPTAAGVVANNATVDSNTSSGGGGGGGSERIINGVCVMQGSDYSREDGDEGVKGDNASSNAADAEHEEDHAHLEIEQRLMEPEVRIKQEEDDEEEQTQQHQHQQKLLDDGAPLDSDAEKQLKMINEEKLRLVRVRRLSSNGDADEARAAAAAVAAVAAATQAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01320258;
90% Identity
iTF_01321091;
80% Identity
iTF_01321091;