Scal014701.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- ct
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010001065.1:358522-395711[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-27 5.5e-23 80.6 0.0 3 72 1060 1130 1058 1135 0.95 2 3 6.7e-32 5.5e-28 96.7 0.0 3 77 1549 1624 1547 1626 0.96 3 3 4.1e-31 3.4e-27 94.2 0.0 3 76 1829 1903 1827 1906 0.96
Sequence Information
- Coding Sequence
- ATGTGCCGCGCGCACGactcacagcagcagcagcagtggcagcaacagcagcgattgAGAGCTGGGGTTGCGGCAGCGCGCGCTACACTAGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTATCCACAGGCACGcccggcagcaacagcgataacaacagtaacaacagcgacaacaacagcagcaacacatcagcagcagcagcagcggcagcagcagcagcagcagcatttacCAGCGGCGAAGAGGAAGCCACTGGGAACAGTGAAAGTGAGAGCGACAAGCTGTTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGgccaacacaaatacaccGTCGCCATCGCCGCCGTTGCTGAGCgctgagcaacagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGCGGCGCCTGTTTAAACCCAAAGCTCTTCTTCAATCACGCACAGCAAATGATGATggaagcggcagcagctgctgcggctgcggcggcagcagcggcagcacagcaacaacagcaacagcaatcgccAATGCATTCGCCcattgttgccaacaacaacaacagcaacacacaggcaatagcaacagctgtaggagcaacagcaaatgtagcagcagcaactgcagtagcaacacaaaagcaatCGACACGTGATGTTgctgaagcaacagcaactagcaattgcaacaatgcagaagacgatgacgatgaagacgatgatgaggaggaggatgcATCGATGCAATCAAATGTGGCGCATGCCGATGGTGATctagatgatgatgatatggAGTTGGAGCCAGAgcatgttgctgatgttggcgCTGGTGTTGCAGTCGTCAAGGCAACATTGGCAGCAAGAACTGATAGCGATGCGAATGCAACGCATAataatgacgatgatgatgatgatgatgaccatcatcataatgataataataatgatgatgatgaagatgttGCCGATGTGGCTAACCATCAACATGGGGATGACGAGGAAGCTAGTTTAAATATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCTCTGGAACAAACTCACCTTGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAACACATAATGCGTTTGGAGGCGCGTTTGGATAAGCAACAGATCAATGAGGCACTTGCTGAGGCAACGgcattggctgctgctgttaatgctgctgcaacaaccattaacaataacaacaacagcagcaacaacaataacaacagtagcaacaacaacaatcacagcagccagagcagcgacaacaacaatgagttGAGCGCTGTgtttaatacaacaacagaTCTTACATCAACCCATCAGCAcaatgacgatgatgaggatgatgatgataatgatcgTGATCATGAGGTTGAGCAGCGCGATgctgatgacgatgaggaggatGCAGATATGGCcaacgagcaacagcaacagcagcaacagcagcagcagcaacatgcagCCATTAACAACAATCGTCACAATGATAACGACGATAagaatgatgatgaggatgaggaggaaCAGGATGCCGAGATGTCCaatgcaacagccacagcGGACAGCAATGagctaaaaatcaaaaaggaaCAGCACAGTCCATTGGATCTGAATGTGCTCAGTCCACATTCGGCTATTGCCAcagctgcggcagcagcagcagccgctgcctGCGCCAACGATCCCAATAAATTCCAAGCTCTGCTATTGGAACGCACCAAAGCAGCACTGGCCGCCGAGGCGCTCAAGAATGGTGCCACCGATCCCACGCATGCCAGCAGTGATGAAATGCCGCAACAACtcgcagcagaagcagcagcagtcgcagtcgcaacaacaactaatcaAGTTAAAGATGATCAAGCTcaagatgaagaagaaaaagaaacaacaacagttgcagctacagctacagccaCAGCTACAGCCAAACCAGAAACAAGCACAAACGTAGGAgagacaaataaaattgaaacattAACAGCCGAGGCCAATTTGCAGCCCAAAGTCGAAATTATTGACACTGAAGACGATGCTGAGATTGTCGCTGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGCGGCGTGGCTTTGAAACAACCACACCAGCAACAGTGACAGCgccagcaatagcaacagcaacaacaacagctttagcTTCAGCAGCAAGTGGAAGCAAAACGCCAACAATTTATCAAAATGCCAATgcggtgcagcagcagcaacagcaattgttgccgccaccaccgccgccgccactgcCGCCgtcacaacagcagcagcagcacttttctgctcagcaacaacaacaacaacaatatcatcaacaacaacaacaacagcagcaacagcaacatggaCCTTCGTCCACAGTGCTGCTTAGCCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAaaccagcaccaccaacaccagcagcaacagttgcatcagccacagcaacatctccataacagcagcaatagcagcaacagcaacagcagcgttaCCGGCAACGATACACTGGCTCCACATCTGCATCATGCGCATCATCATGGCCATCCACATGGACAGCTGTTGCATGCAGCGCATCATCTGCATCATGGCGCCGACTCCAACTCACCCAGCGCCACAAGCACACCAAAAAGCACCGCCCAGCTAGCAgccagcattgccagcacACTGAATGGCAACAAGTCGCTgttgcagcaggcagcagccgctgccaaTGTggaggacaacaacaacagcttgacACCGAATGCAAATGCGGCCGTGGCCGCTGCAGCAATGGCTGCCAATGCCCAGCATGCAGCTGCCTTTTTGCCCAATCTGCCCAACTTTCCCAGCCTGCCAGCGTTTCAGTTTGCAGCCGCAGCTGCCGCTGGCCAGGAAGCCCGAGCACATTTTCGCTTTGCGGATGccgagctgcagctgcagccgggCGTCTCAATGGCCGGCCGTTTGGGTGAATCGCTGATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAAGAGATGCTGCGCTACAACATGGATAAGTATGCGAATCAGGCGCTGGACACTCTGCATATCTCGCGACGTGTACGTGAGCTGCTCTCCGTGCATAATATTGGACAGCGACTGTTTGCCAAATATATTTTGGGTCTGTCACAGGGCACCGTTTCGGAGCTGTTGAGCAAGCCAAAGCCGTGGGATAAGCTGACCGAGAAGGGTCGTGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGTTACTCAAATCCCTCATACCCAAAAAAGATTCGGGACTGCCACAGTATGCTGGACGCGGCGCTGGTGGCGATGATTCCATGTCCGACGATCGCCTCGCACACATTCTCAGCGAGGCCTCCACCCTAATGAAGAGCAGCGCAGTCGCcgtacaacagcagcaacaggagcatcAGCGCCGTCATGTCGGCGACGATACACACAGCAATGAGGATAGCAAGTCGCCGCCGCAAAGCTGCAGCTCCCCCTTCTTCAAGGTGGAGCACCAGATCAAGCatctgcagccgcagcagcagcaacagctgcaacatgtTTCGGAGCATGCGCAGCGCGAGCAGCGTGAGGCggccgcagctgctgccgccgttgctgtacatcagcaacagcagcagcagagggaGCAGCGAGAGCAGCGCGAACAGCGCGAAGCAGCACAGcgggaacagcagcagcgcataCGTCATGAGGATTTGGCACAGGACAAGATGGCTCGTCTCTATCAGGAGCTAATGACACGTACACCTCGTGAGGCAGCCTTTCCAGGATTTTTGCTTTCGCCATTCTTTGGTGGCGCAGCTGGCATGCCTGGAGCACCCGCCAATCCATTCCCCACTGCGATGGGCGCCGATGAGAATATGCGTCATGCCTTGGAGCGTGAGATAgccaagctgcagcagcagcaggcccAACAGGCGCAACAGGCCGCCGGTTTTCCCAACTTTTCCAGTTTGATGGCACTGCAACAGCAGGTGCTTAACGGTGCACAGGATCTATCGCTGGCCAACAAGGACATTAAGCTGAATGGCCAACGTTCATCACTGGATCAGcacagcggcggcagcagcagctgctccaagGATGGCGAACGTGGCGATGACAATGATCGCAGCTATCCAGCCCTGCCACATGTCCGCAAATCGGAGGGTGGCAACACACCAGCACCGCCAGCACCCCCAGCAGTAACCGCTGCCGGAGGTAATAGTAATTCTAGCGCCGCTGGCTCCACTGTTGCCACTGGTGGTCATGGCAGCAACTCAGCAGCGCCCAGTCCACTGAGCAACTCCATACTGCCACCTGCATTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCCAGTCCGTTGCAGCGTATGGCATCAATCACCAACTCGTTGATCACCCAGCCGCCAGTGACGCCGCACCATTCACAGCCACAGCGTCCCACCAAGGCGGTGTTGCCACCGATTACACAGCAGCAGTTCGATATGTTTAACAATCTCAACACCGAGGATATTGTGAGACGGGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTGTTTGGTGAGTCAGTGCTGGGTTTGTCGCAGGGTTCGGTGTCGGATCTATTGGCACGACCCAAGCCCTGGCACATGCTCACGCAAAAGGGACGCGAACCGTTCATACGCATGAAGATGTTCCTGGAGGATGAGAATGCGGTGCATAAGCTGGTCGCCAGCCAGTATAAGATTGCGCCCGAGAAGCTGATGCGCACAGGCAGCTACAGCGGCAGTCCACAAATGCCACAGGGTCTGGCTAACAAAATGCAGGCCACCCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCCGCCCAGGCCCAGCACATTATGCAACAGATGCAAGCGGCTGCTGCCATGTCCGCGgccatgcaacagcaacagcaggcagctgccGCTCAAGCTGCAGCCGTGCAGCAGGCCCAAGCGcaggctcaggctcaggccaatcagcatcagcaggctcagcaacatcagcaggcccagcagcatcagcaggcacagcaacaGGCACAGGCGCAGTTGTTGCATCATCAGAATATGCTGTTGACATCGCCAGGCTTGCCACCCCAACATACCATTagtttgccagcagcagtgacACCCAGTGGCATACAGAGCGGTGCTGGTAATGCCGCATCAGCTTGCAATACGCCCGGCAGCAATGAGAAGAAACCGATGTTGATGCCAGTGCTGGGTGGTGCACATACTCCAAATGCCATGCGCAGCCTGCACCAGCATATGTCGCCAACAGTTTATGAGATGGCTGCATTGACCCAGGATCTGGATACGCATGATATCACAACGAAAATCAAGGAGGCTTTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGTGAGGCAGTGTTGGGCTTGTCGCAGGGCTCTGTCTCGGAGCTGCTTAGCAAACCGAAGCCCTGGCACATGCTCTCCATTAAGGGTCGTGAGCCCTTCATTCGCATGCAGCTGTGGCTCAGTGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGTCGTCGAAGCACTGGACCCAATCAGCAGGACAACAGCAGTGATACGTCCAGCAATGATACAAATGATTTCTATACGAGCAGCCCCGGACCGGGTTCGGTGGGCTCCTCGGTGGGTGGTGCACCGCCTAGCAAGAAGCAGCGTGTGCTCTTCTCAGAGGAGCAAAAGGAGGCGCTTCGCTTGGCTTTTGCACTTGATCCATATCCCAATGTTGGAACCATTGAGTTTCTAGCCAATGAGCTGAGTTTAGCGACACGAACCATTACGAACTGGTTCCACAATCATCGCATGCGACTCAAGCAGCAGGTACCACACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTGCAACAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGCTTAAGTGGCGCGCCCATACCCTACCCACCGTATTTTGCCGCGGCTGCTCTGCTCGGACGCAGCCTGGCCGGCATACCGGGTGCGGCGGCAGCTGCTggggcagcggcagcagcggctgctgcagttggCGCTGCCGGCGGCGATGAGCTCCAAGCACTGAATCAGGCATTTAAGGAGCAGATGAGCGGCCTGGATTTGTCAATGACAACGCTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGACACAATATGAGCGACAACGAGTCCCTCGAGGGTGTCTCCCACGAGCCAGAGCATACGCCCATGTCCGACTATGAGAAGGTGTTGCAGAAATCAGCACTTGCCTCggctgccgcagctgctgcgtACATGAGCAATGCGGCGCGCAGTTCAAGACGCAAGCCGGCAGCGCCTCAGTGGGTTAATCCGGCGGGTGCAGGTACACCAATAGCAGCTGGCGTTGTTGCCAATAGCGCTGGTGTTgacagcaccaccaacagcgCCACTGAGCGCATCATCAACGGTGTCTGTGTCATGCAAGGCTCCGACTACAATCGTGAAGAGGGCGATGAGAGCGTTAAGGGTGAAAGTGCATCCAATGCTACCGATGCGGAGCACGATGATCATGCCCAGCTGGAGATTGAGCAGAGTTTGATGGAGCCCGAGGTGCGCATCAAGCAGGAGGACGATGACGAGGAAGAACAAacgcagcaccagcagcaacagcagcagctggacgATGGTGCGCCTCTGGACAGCGATGCGGAAAAGCAGCTCAAGGTGATCAATGAGGAGAAGCTGCGTCTGGTACGTGTGCGGCGTCTCAGTAGCAACGGCGATGCCGATGAGGCGagggcagcagcggcggctgtggcagctgttgcggCAGCGacgcaggcagcagcagcgtggAACTACTAA
- Protein Sequence
- MCRAHDSQQQQQWQQQQRLRAGVAAARATLAEKEVNTLKEQLSTGTPGSNSDNNSNNSDNNSSNTSAAAAAAAAAAAAFTSGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQQSPMHSPIVANNNNSNTQAIATAVGATANVAAATAVATQKQSTRDVAEATATSNCNNAEDDDDEDDDEEEDASMQSNVAHADGDLDDDDMELEPEHVADVGAGVAVVKATLAARTDSDANATHNNDDDDDDDDHHHNDNNNDDDEDVADVANHQHGDDEEASLNIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATTINNNNNSSNNNNNSSNNNNHSSQSSDNNNELSAVFNTTTDLTSTHQHNDDDEDDDDNDRDHEVEQRDADDDEEDADMANEQQQQQQQQQQQHAAINNNRHNDNDDKNDDEDEEEQDAEMSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKAALAAEALKNGATDPTHASSDEMPQQLAAEAAAVAVATTTNQVKDDQAQDEEEKETTTVAATATATATAKPETSTNVGETNKIETLTAEANLQPKVEIIDTEDDAEIVAGQTLEEQLVNSYWRRGFETTTPATVTAPAIATATTTALASAASGSKTPTIYQNANAVQQQQQQLLPPPPPPPLPPSQQQQQHFSAQQQQQQQYHQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAANQHHQHQQQQLHQPQQHLHNSSNSSNSNSSVTGNDTLAPHLHHAHHHGHPHGQLLHAAHHLHHGADSNSPSATSTPKSTAQLAASIASTLNGNKSLLQQAAAAANVEDNNNSLTPNANAAVAAAAMAANAQHAAAFLPNLPNFPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSDDRLAHILSEASTLMKSSAVAVQQQQQEHQRRHVGDDTHSNEDSKSPPQSCSSPFFKVEHQIKHLQPQQQQQLQHVSEHAQREQREAAAAAAAVAVHQQQQQQREQREQREQREAAQREQQQRIRHEDLAQDKMARLYQELMTRTPREAAFPGFLLSPFFGGAAGMPGAPANPFPTAMGADENMRHALEREIAKLQQQQAQQAQQAAGFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPALPHVRKSEGGNTPAPPAPPAVTAAGGNSNSSAAGSTVATGGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQANQHQQAQQHQQAQQHQQAQQQAQAQLLHHQNMLLTSPGLPPQHTISLPAAVTPSGIQSGAGNAASACNTPGSNEKKPMLMPVLGGAHTPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMTTLKRERSDDYQDELELDASGHNMSDNESLEGVSHEPEHTPMSDYEKVLQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGAGTPIAAGVVANSAGVDSTTNSATERIINGVCVMQGSDYNREEGDESVKGESASNATDAEHDDHAQLEIEQSLMEPEVRIKQEDDDEEEQTQHQQQQQQLDDGAPLDSDAEKQLKVINEEKLRLVRVRRLSSNGDADEARAAAAAVAAVAAATQAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01320370; iTF_01320980; iTF_01321091;
- 90% Identity
- iTF_01320370;
- 80% Identity
- iTF_01320370;