Scyr010440.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza cyrtandrae
Gene Symbol
Rel
Assembly
GCA_035044605.1
Location
JAWNNS010000640.1:19571685-19574635[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-52 1.5e-48 165.0 1.0 1 168 146 328 146 329 0.95

Sequence Information

Coding Sequence
ATGCATCAACAATACTTTGATTTGGATCAGCGCAAGAATATATCATATGCCAATGATTGTTCCAGTACGAGTGGTTATAGCAGCGCCAATTCGCCCACATCGATGACACTATCGCCCGCCCATTCGCCAGAAACGCTTAACTTGCAAAATGAGTTTGCGAATCTCAATTTGCCCGCGATATCGAATTCACCTTCACCACAACTTCAGCAATTACGAGGGTCACCATATCATCAAAATCCGCTGCGCACAAATGGCAACCTTGGCATGGAAATTGATGGCACCGGCAGCATTGGTTGCTTGTTAAATGGCAACGCAGACTTTGGCAACATCAATAACATGCACATGCCTGTGGATCACTATTACGCGACGCCACCACCACAAACATTTGGATTCCACCATGTCGATACAGGTATCAAAAATGAATATTGCGCTCAGCTACATATTGCCGAGCAGCCGGTGGAAAAATTTCGATTTCGCTACAAGAGCGAAATGCATGGAACACATGGCTCATTAAACGGCATCAATTCGAAGCGTACACCGAAAACATTTCCCGAGGTTATATTGCGCAACTATAAGGGACCGGCTGTAATCCGCTGCAGTCTTTTTCAAACGAATCTGGATAGTCCGCATTCGCATCAGTTGGTGGTGCGCAAAGATGAGCGCGATGTGTGCGATCCACATGATTTACACGTGTCACAGGAGCGCGGCTATGTGGcacaatttattaatatggGCATCATACACACGGCAAAGAAATACATTTTCGATGAGCTCTTCAAAAAGAAACAGGATCGTTTGGTCTTTCAAATGAGCCGACGAGAGCTGTCCACCAAGCAGCTTCAGGAGCTCCATCAGGAAACTGAGCGTGAAGCCAAGGATATGAATTTGAACCAGGTTCGCTTGTGTTTTGAGGCCTTTAAAATTGAGGAGAATCAAAAGTGGACACCAATAGCCGAACCCGTGTTTAGCAATCCCATCAATAATCGCAAATCGGCACAGACCGGTGAATTGCGCATTACACGATTAAGCAAACCAACTGGCAGCGTTATGGGCAACGATGAGCTCATCTTGCTCGTCGAAaaagtcagcaaaaaaaacatcaaagtgCGTTTCTTTGAGGAGGACGATGATGGTGAGACCGTATGGGAGGCATATGCCAAGTTTCGTGAATCTGATGTACATCATCAGTATGCAATTGTCTGTCAGACGCCCTCCTATAAAGACAAGGACGTGGAGCGTGAGGTTGCCGTTTCCATTGAGCTAATACGTCCCTCCGACGATGAACGCTCATACCCCCCCTTACCCTTTCGTTATAAGCCACGCGATGCAATTGTCTCACGCAAACGTCGACGCACCTGCTCCACACttaccagcagcaacagcagcaccagcagcagtggcagcttAAACAACTTAATGGAGATGCCCAAGACAGTGCCTCAACAGGGTGGTGTGGCAAATGTTTCGCTGCACGATCAAACAATCAGTCAGGAATTTGGACGTGAATTCTTTGTGGATCAGCTACTAAATTCGGAGTCATTTCGCAAAATACTCGAACCCGATTCCACAGAGCTGGAGAAGTTGTGCGTGCCCGATGTTGGAGCACTGGAACACGATGGTCACGGTGGCAAAACGGAGTCAGCTAACAGTTTCGCTGGTCTTGGACAGGGCCGCACGGTAACCAGCATTCATCTGGGCGAGATCTTCAAAATATACGATACAATGCGACGCACCGGCAAGAATCCCAAGCTCTTTGCTGCCTCGTGTCTAAAGATCGAAAGCTTGTTCACAGCCCATGCGCTCCAGAATGAGAATAATGACACACTGCTGCACGAGGTGATTAGCCAGCGCAAGGATAACGTGAAGCTGGCCATTAAAACGTTTGAGGTCATCGACTACTTTAAACTGCAGGAGCTGGCGCATAGTGTACTCAATTCGGATGGCGATAGTGGTTTGCATGTGGCCTGTCAACAGGATCGTCCGCATTATATACGCCCACTGTTGACACTTGGCTGTAATCCCAATCAACAGAATCACATGGGCAATACGGCCTTACACTTAGCTATTAAGGAGGATCACACCAATTGCATTGACTTCTTTTTTAATGGACCCGGCGGTGTTAAGTTGGATTTATCGCTGAAAAACGATGACGGATTGACACCGCTGCATATGGCCATTAGGCAGAATCGTTACGATGTGGCCAAAAAGCTAATCAACTATGATCGCAGCTCCATTAACGTATCGAACACAACGGATGGCAATAATGCCCTGCATATGGCCGTTCTGGAACAGAATGTAGATCTATTAGTTCTCATTTTGGATGCACCGAATCTAACTGATGTTTTGTTGTCTAAGAATTCGGCTGGTTATACGCCCTTGGAACTGGCGCGCGCCAAGGCCAACGAGAGCTGTGTACTGCTATTGGAGAAGGTTTATCCCGATAAGGATGAAGCTGCAATGACCTGGATACCATTAAATGTCAAGGAAGAAATTGACTCTTCCTCAGCCGAAGATGATGAAGATAGCAATCCGGATGTGCCACCGCCAGCTATTAAAACCGAAGAAATcgatattgattttaaaacaGAAGATGACAACAATTTAATGCTAGAAGATGCAAAGGATCCGAAAACTCAACTGGaacatttgttaaataacAAGGACAATTTTGATAAACTTGTTGCTCTGCTCAATGAGCCAAGCAGTCAAAATCCAAGTTCAAACAAATGGACAGAACTTGCAGAGAAATCATCGCTAGGTCAACTTGTATTCCTCTGGTCCAGCTCAGAGGGTATGCTCAACTACATTCAGCATAAATCAAGTGATCAGGAGTGCAAGTTATTTGCAAATGCGCTACAAGAAATGGGCTTGCTTAATGCCTAA
Protein Sequence
MHQQYFDLDQRKNISYANDCSSTSGYSSANSPTSMTLSPAHSPETLNLQNEFANLNLPAISNSPSPQLQQLRGSPYHQNPLRTNGNLGMEIDGTGSIGCLLNGNADFGNINNMHMPVDHYYATPPPQTFGFHHVDTGIKNEYCAQLHIAEQPVEKFRFRYKSEMHGTHGSLNGINSKRTPKTFPEVILRNYKGPAVIRCSLFQTNLDSPHSHQLVVRKDERDVCDPHDLHVSQERGYVAQFINMGIIHTAKKYIFDELFKKKQDRLVFQMSRRELSTKQLQELHQETEREAKDMNLNQVRLCFEAFKIEENQKWTPIAEPVFSNPINNRKSAQTGELRITRLSKPTGSVMGNDELILLVEKVSKKNIKVRFFEEDDDGETVWEAYAKFRESDVHHQYAIVCQTPSYKDKDVEREVAVSIELIRPSDDERSYPPLPFRYKPRDAIVSRKRRRTCSTLTSSNSSTSSSGSLNNLMEMPKTVPQQGGVANVSLHDQTISQEFGREFFVDQLLNSESFRKILEPDSTELEKLCVPDVGALEHDGHGGKTESANSFAGLGQGRTVTSIHLGEIFKIYDTMRRTGKNPKLFAASCLKIESLFTAHALQNENNDTLLHEVISQRKDNVKLAIKTFEVIDYFKLQELAHSVLNSDGDSGLHVACQQDRPHYIRPLLTLGCNPNQQNHMGNTALHLAIKEDHTNCIDFFFNGPGGVKLDLSLKNDDGLTPLHMAIRQNRYDVAKKLINYDRSSINVSNTTDGNNALHMAVLEQNVDLLVLILDAPNLTDVLLSKNSAGYTPLELARAKANESCVLLLEKVYPDKDEAAMTWIPLNVKEEIDSSSAEDDEDSNPDVPPPAIKTEEIDIDFKTEDDNNLMLEDAKDPKTQLEHLLNNKDNFDKLVALLNEPSSQNPSSNKWTELAEKSSLGQLVFLWSSSEGMLNYIQHKSSDQECKLFANALQEMGLLNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00524893;
90% Identity
iTF_01327662; iTF_01327663; iTF_01326937; iTF_01322414; iTF_01324673; iTF_01323153; iTF_01320243; iTF_01326165; iTF_01321688; iTF_01323884; iTF_01325435;
80% Identity
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