Basic Information

Insect: Scaptomyza caliginosa
Gene Symbol: stc
Assembly: GCA_035044725.1
Location: JAWNNR010000049.1:488223-491852[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.2e+04 -3.7 0.5 15 18 360 363 359 364 0.79

2 16 2 1.6e+04 -4.1 1.6 15 19 387 391 386 391 0.81

3 16 0.013 1e+02 2.9 2.7 4 11 420 427 419 428 0.91

4 16 5.9e-07 0.0048 16.8 15.1 1 19 432 449 432 449 0.93

5 16 1.4 1.2e+04 -3.7 1.1 6 10 475 479 474 479 0.89

6 16 1.9e-07 0.0016 18.3 16.0 1 18 485 502 485 503 0.98

7 16 1.8 1.5e+04 -4.0 1.4 7 13 507 513 507 514 0.72

8 16 2e-09 1.6e-05 24.6 12.9 1 19 543 561 543 561 0.98

9 16 2 1.6e+04 -5.4 1.3 11 16 592 597 592 597 0.67

10 16 2.4e-05 0.19 11.6 17.0 4 19 609 624 602 624 0.88

11 16 0.33 2.7e+03 -1.6 12.7 1 11 664 674 664 686 0.79

12 16 4.8e-10 3.9e-06 26.6 15.5 1 18 691 708 691 709 0.97

13 16 1.4 1.2e+04 -3.6 1.5 6 10 738 742 737 743 0.61

14 16 2 1.6e+04 -5.9 8.6 8 18 754 765 746 766 0.76

15 16 1.3e-08 0.0001 22.1 12.6 1 16 802 817 802 825 0.89

16 16 8e-08 0.00066 19.5 12.5 1 19 835 854 835 854 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.2e+04	-3.7	0.5	15	18	360	363	359	364	0.79
2	16	2	1.6e+04	-4.1	1.6	15	19	387	391	386	391	0.81
3	16	0.013	1e+02	2.9	2.7	4	11	420	427	419	428	0.91
4	16	5.9e-07	0.0048	16.8	15.1	1	19	432	449	432	449	0.93
5	16	1.4	1.2e+04	-3.7	1.1	6	10	475	479	474	479	0.89
6	16	1.9e-07	0.0016	18.3	16.0	1	18	485	502	485	503	0.98
7	16	1.8	1.5e+04	-4.0	1.4	7	13	507	513	507	514	0.72
8	16	2e-09	1.6e-05	24.6	12.9	1	19	543	561	543	561	0.98
9	16	2	1.6e+04	-5.4	1.3	11	16	592	597	592	597	0.67
10	16	2.4e-05	0.19	11.6	17.0	4	19	609	624	602	624	0.88
11	16	0.33	2.7e+03	-1.6	12.7	1	11	664	674	664	686	0.79
12	16	4.8e-10	3.9e-06	26.6	15.5	1	18	691	708	691	709	0.97
13	16	1.4	1.2e+04	-3.6	1.5	6	10	738	742	737	743	0.61
14	16	2	1.6e+04	-5.9	8.6	8	18	754	765	746	766	0.76
15	16	1.3e-08	0.0001	22.1	12.6	1	16	802	817	802	825	0.89
16	16	8e-08	0.00066	19.5	12.5	1	19	835	854	835	854	0.96

Sequence Information

Coding Sequence: ATGGCCGAatattggcagcaacaacaacagcagcagttagcGCCGCAGCAGCTATCAAATGGAGCAGCAGCGCGTAATGACTCAGACGCTGCCTGCAATGGCGCTTCTACTGGTcacagtaacaacaactatgTTAATTTCAATCAGTTCATAACTCAACATAACTTACATAGCTCCAACCTCAACTATAACATTGGCGGCGGTTCCTTTAGTTTAACGcccaacaccagcagcagcagtaccagCGGCAGCGCTGCCAACAGCGCCAGCAACACCTCTGGCGTTAGCTCCTCCAGCTTTGGCGTCGCACAATATATGCCACCTTTATTCGGCTACCAGAATGGCGATGGCGGCCAACACTACCAGGTTGGAGGAAGGGGAGAAGGCGTCGCTGCAGGCGCTGCTGCCTATCCCAACATGCAATCAAATTTTGGCAATAATCCATTTGCCACTGCTGCCGGTGGCGGTTTTGACTTTAGCGCTTCCAAGCTGCAAGCGTCCGCACCCGAATTTGTGCCCAGTTTTGCCAAGCTTAGTCTGTCGACGACCAATAAaaccaatagcaacaacaataacaacactgCCACACAGCTTGAGCACCTGGCCAATGAGCAGCCAGCCGCAGCATCAGCCAACAGCACCAATTCTCAGAACCGGCAACCAAAACCGTTGCAAGggagcagcaatagcagcagccgccagcagcagcgtcgtCAAGATTATCGCGAAGATCGCCACGAAGATCGTTATGAGCGGGCAAAGAAGCCACAGAAGCAACAACGCTACGACAACCATCGTAGCAATAAACGGCGCGATGACTGGAATCGCAATCGTGATCGCATCAATGGGTATCCACGTGCCGCTGACGAACTggacaccagcaacagcaacgatagTGCACAAACCTCACCAGAGaagcaaccgcagcagcaacagcaacaacaaatatcacCACGACGTGCTCCGGATAATGAGAAGCTATCGCAGCGTGAGAAGCTTATGCGCGACATTGAGCAGAGACGTCTGGagtgtttggtgtgtgtggaACAGATAAAGGCTCATCATGGTACGTGGTCATGCCAGAACTGCTACCATGTGCTGCACCTCAAGTGCACCATAACCTGGGCAAGTAGCTCGAAATCCGCAGAGGGTTGGCGCTGTCCCGCCTGCCAGAATGTGCTGGAGGAGGTGCCACGTGAATATTACTGTTTTTGCGGCAAGCTTAAGAATCCGCCATTAACACGCAACGAGCTGGCACATACCTGCGGCGAAGTGTGCTGTCGGGTGGAAGGATGCAGTCATGCGTGCACCCTGCTGTGTCATCCGGGTCCATGTCCGCCATGCCAGGCGAATGTGAGTCGTAGCTGCGGCTGTGGGCGCACCTCCAAGCTGATGCAGTGCGCCATTAAACAGCAGCTTCAATGCGAATCTATCTGCGATAAATCGCTGAATTGTAGCGAGCATCGTTGCCAGCAGCCCTGCCATGCGGGCAAATGTGAGCCATGCGGAGAGCAGGTGGAGCAAAACTGCCActgtggcaaacagcagcgTGAGGTGCTGTGCACCAGGGAAAGTCAGGACAAGCGCAGTTATTCGTGCAAGGAGTGCTGCGGCAAGCCATTGCCCTGCGGCAATCACAAGTGCAAGGATTCATGTCATGCCGGCGCCTGTCGTCCCTGCAAGCTTAGTCCCCAACAGATCACCAGTTGCCCCTGCGGCAAGCTGCCAGTGCCGCCGACGCAACGCACCAGCTGCATTGATCCAGTGCCCACCTGCGAGGGTGCCTGCGGTAAAACGTTGCGCTGTGGCAAACCTGCTCATCCGCATCAATGCGCCAGCAAATGTCATTTGGGCCAGTGTCCGCCATGTCCCAAGCAGACGGCAGTTAAATGCCGTTGCGGTCACATGGATCAACTGATCAAATGCCGGCAACTATCAACACGCGCGGATGATGCACGTTGCAAGCGTCGCTGCACAAAGAAGCGCAGctgtggcaaacacaaatgcaatacAGAATGCTGCATCGATATTGATCATGCCTGCCCGCTGCCCTGTAATCGAACATTGAGCTGTGGGAAGCACAAATGCGATCAGCCGTGTCATCGCGGCAATTGCCCGCCCTGCTACCGTAGCAGCTTTGAGGAGCTGTACTGTGAGTGTGGTGCGGAGGTTATCTATCCACCTGTGCCATGTGGCACAAAGCGTCCACCCTGCAAGCGACCCTGTTCGCGAACCCACGGCTGTGAGCATGTGCCGCAGCATACCTGTCATGCAGCCGCTGTCTGTCCGCCCTGTATGATGTTCACAACCAAGTGGTGTCATGGCAATCATGAGCAACGCAAAACGATACCTTGCTCTCAAGAGAGCTTTAGCTGTGGGTTTGCATGCGGCAAGCCGTTAGCTTGCGGTCGCCACAAATGCATACGGCCCTGCCATGAGGGCGACTGTCCACAGCAGCCGGGCGAAGTGTGCCGGCAAAGCTGCTCTAAGCCACGTTTGCTGTGCGGCCATAAGTGTGCCGCTGTCTGTCATGACGGCGCTTGTCCGGAGACACCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAAAGTCGTAGCTGCCAGGAACTAGCGCGAGAACACAGTCGCATTGCCACTGCACAATTGGCCTCCTCAATGGCGGAGATGTCGCGTGGAAACTATATGGAACTTAGCGAAATACTCGCAcccaccaaaaacaacaaatccaacaaaacCTTGGACTGCAATGAAGAGTGTCGTGTATTGGAACGTAATCGTCGCTTGGCTATTGGACTGCAATCGCGCAATCCGGATACGCAGCTCAAATCGCTGACCAAATATTCGGAATTCATGCGTGGATTCGCTAAGCGCAATCCGGCTCTAACCAAAAGTGTCTATGAAACGCTTACCGATTTGGTTAAGTTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCATTCGTTTCCCACGATGAATCGCGAAAAGCGTCAAATGGTGCACGAACTGTGCGAAGTGTTTGGCGTGGAGTCTGTATCCTATGACAAGGAGCCCAATCGCAATGTTGTCGCCACAGCGCATAAGGAACGCTGCTGGTTGCCCGCCACTAGCGTTATGGAGGTCCTTGCACGTGAATCCGGTCAACGACGCGTGCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQLAPQQLSNGAAARNDSDAACNGASTGHSNNNYVNFNQFITQHNLHSSNLNYNIGGGSFSLTPNTSSSSTSGSAANSASNTSGVSSSSFGVAQYMPPLFGYQNGDGGQHYQVGGRGEGVAAGAAAYPNMQSNFGNNPFATAAGGGFDFSASKLQASAPEFVPSFAKLSLSTTNKTNSNNNNNTATQLEHLANEQPAAASANSTNSQNRQPKPLQGSSNSSSRQQQRRQDYREDRHEDRYERAKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQTSPEKQPQQQQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEEVPREYYCFCGKLKNPPLTRNELAHTCGEVCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAIKQQLQCESICDKSLNCSEHRCQQPCHAGKCEPCGEQVEQNCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLPVPPTQRTSCIDPVPTCEGACGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNTECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHTCHAAAVCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGFACGKPLACGRHKCIRPCHEGDCPQQPGEVCRQSCSKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRVLERNRRLAIGLQSRNPDTQLKSLTKYSEFMRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_01321594;
80% Identity: -