Scal008038.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza caliginosa
Gene Symbol
dl
Assembly
GCA_035044725.1
Location
JAWNNR010000413.1:295543-298660[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-74 1.1e-70 236.9 0.0 1 169 50 220 50 220 0.99
2 2 2.6 8.4e+03 -3.6 0.8 100 120 612 632 600 643 0.41

Sequence Information

Coding Sequence
ATGTttccaaatcaaaataatttggCCACAGCGGGTACAGCAGGCGATGTTcagcaacaaaatcataaTTACAATGgcctgcaacaacagcaacaacaaactcaacagTTGCCACAGTCGGCCAAGAACGTGCGAAAGAAACCTTATGTAAAAATTACTGAACAGCCAGCTGGTAAAGCCTTGCGTTTTCGCTATGAGTGTGAGGGCCGCTCGGCGGGCTCCATACCCGGCGTCAATTCAACGCCCGAAAATAAAACCTATCCGACGATTGAGATTGTGGGTTACAAGGGACGcgccgttgtcgtcgtttCCTGTGTCACCAAGGATACGCCATATCGTCCGCATCCCCATAATCTGGTTGGAAAGGAGGGTTGCAAGAAAGGCGTCTGTACGTTGGAGATTAGCAGCGAGACAATGCGAGCCGTATTTAGTAATTTGGGCATTCAATGTGTCAAAAAGAAGGACATTGAGGCGGCGCTAAAGGCTCGAGAAGAGATTCGCGTAGATCCATTCAAGaCGGGATTTTCGCACCGTTTCCAACCGTCGAGCATTGACTTGAACTCGGTGCGTCTGTGCTTTCAAGTATTCATGGAGAGCGAGCAGAAGGGACGCTTCACATCGCCGCTACCGCCGGTCGTCTCTGAGCCGATCTTTGACAAGAAAGCCATGTCTGATTTGGTCATCTGCCGGCTGTGCAGTTGCTCGGCCAGTGTGCTGGGTAACACGCAGATAATATTGCTGTGTGAGAAAGTTGCCAAAGAGGACATAACAGTACGTTTCTTCGAGGAGAAGAACGGTCAGACGGCCTGGGAGGCTTTAGGTGACTTTCAGCACACAGATGTGCACAAGCAGACtgcaattacatttaaaacgCCGCGATATCACACTCTGGAGATAACGGAGCCCGCCAAGGTTTTTATACAGCTGCGACGACCATCAGATGGTGTTACCAGCGAGGCTCTACCCTTTGAATATGTGCCATTGGATTCAGGTAGGCATACGTTTTGGAATCTTCATAGGCATCTCAAGCGGAAGCCCGATGAAGACATCTTTCAGCAAATTCTGTCGATCGACTCCGGTGCCGCCAAGCGCGAAACGCCAACGATTGAGGTTATTGATCTTAATACACCCACTTTGGAGCAACCTAGCCCAATGTTGCTTAATGCATCAGCTGCAGTGACAGTGGACGTCACAGATCAAGCGCCACATGATATGGAAGcagccaatgctgctgctgaagctgAGGCAGAAGCAGACCGGCTGCGTACTGAACTCGAAATTGATTCAATTATTGATCAAAAGGTGCGTGAAATGGAACAACTGCAATTGGAGCAACGGATGGAACAACAAATGGAGCAACAGTTGGCAGCGCCTGAGCCGCATCCACTAACACCTAATGATAAGATCAACGAGTGGATGAAGTCTAAcgaactacaacaacagccacacgAGTCAAGTTTAGGTCCTGATGAAGTCGAGGCAGAAGACAGTGATGCCACAGTGGAAACCcaagtggctgccacaaaTGAAGATAAAACACTCAACGACCTCCTCGAGCAGGTAGCTGAGTTGGATGAGATTTACACTGACTTTGTCATGCAACGCGACACGTACAACAACACACTGCAGAATGAGTTTCAGACAATGGATCGACCACCGATGCAGGTGGAGGATAGTTTTGATGATGCAGCAACTTATACGAGTTTGCAGATAGCATTTAAGAACCCGATCAATATACCAATGGATGACTTAATGCCACCCACGCCACCTATGTCCCAGTGTGCACCTGAGGATGCACAACACTACGATGCTGTAGAAGTAAACTCACAACAGCATCAGCGCCAACATCAGCTACAGGAAGTAATCAGAAATCATGAACACgaacagcaggaacagcaggaACTGCAGGAAGCTGCAGTTCTATTAGCCGCTGAAGAGGAAAAACTGCCACCACTGCCTCCAAAGCGATTGCGAAAACAAGACAGTAACGCTGAGAATCGCTCTCTAGATGCAAACAGTGTGGATGCAGTGCCGCCACCAGTTCGTGAAAAGCCACGCCTGCCACCGCCTGTTATTCATCCGAGAATGGCCGATTTGCCAATGGCGCCCACAAAACGCTTACCGCAGCCACCGGAAACGAAGCCCAAGCCGAAGTCAAAGCCCGAAAAGAATCCCAACTTCAATACGCTACCGCGTCAAAAGAAGCCCAGCTTTTTTTCAAAGCTTTTCTCGCGTCGCAAGAGCAAACCAGAGCTACTGGATCAGAGCAGCGAAAACTGTTCACGTCTTGACTCCAAGGCTACCAGTGCAGCGGCTAGTCGAGAGCCTAGCCTGGACAATCTGAATATGCGCGATCCAATGCGCGCCTCGCAGCGCAAATCAGGGCCTTTAAAGTCGGGTGGCGCTGGTGGATCGGCAGTGTCGCGGAGGTCTGGAAAGACGGGCAAGCCCTGTGGACGCAGTGTTAGCAGCGTGTCAGGCAAGCGACCCTCGTATTTAAATGCAGACGTTGTGCACATACCACTGAAGGGCGAGAGTGCGAACAGCTTGCAGCAGTCTCCGAATGAAGCATATTCAAATGCCAGCACAATAACTGTGGGCGGCCAGCTGGACAGACGCACGGCATCTGCACTGCAGCTTGCCGATATACCAATTAGCGAGGGTGGCATGGAGCTGGTGGCCATTGCTGACCGCCAAAGCTTGCACAATTTGGTCAGCTCAATTGAAGCGCATTTCAACGTGCAAATGGACCCCAATCTTGACCTTGCTGAGGTGGAGCATTTTGCGCTTTACACAAGTATACCGCCGCAGGCGACTGTTAGCGAGTTTGATGAGACATCCGCTTACTATGCACCAGTCGATGCAGGCGAGATCCTGACGCCCGATCAGGTTGCCAAACGGCTGGCTGCAGCAAATAACGCCAATTAA
Protein Sequence
MFPNQNNLATAGTAGDVQQQNHNYNGLQQQQQQTQQLPQSAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTAWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILSIDSGAAKRETPTIEVIDLNTPTLEQPSPMLLNASAAVTVDVTDQAPHDMEAANAAAEAEAEADRLRTELEIDSIIDQKVREMEQLQLEQRMEQQMEQQLAAPEPHPLTPNDKINEWMKSNELQQQPHESSLGPDEVEAEDSDATVETQVAATNEDKTLNDLLEQVAELDEIYTDFVMQRDTYNNTLQNEFQTMDRPPMQVEDSFDDAATYTSLQIAFKNPINIPMDDLMPPTPPMSQCAPEDAQHYDAVEVNSQQHQRQHQLQEVIRNHEHEQQEQQELQEAAVLLAAEEEKLPPLPPKRLRKQDSNAENRSLDANSVDAVPPPVREKPRLPPPVIHPRMADLPMAPTKRLPQPPETKPKPKSKPEKNPNFNTLPRQKKPSFFSKLFSRRKSKPELLDQSSENCSRLDSKATSAAASREPSLDNLNMRDPMRASQRKSGPLKSGGAGGSAVSRRSGKTGKPCGRSVSSVSGKRPSYLNADVVHIPLKGESANSLQQSPNEAYSNASTITVGGQLDRRTASALQLADIPISEGGMELVAIADRQSLHNLVSSIEAHFNVQMDPNLDLAEVEHFALYTSIPPQATVSEFDETSAYYAPVDAGEILTPDQVAKRLAAANNAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530040;
90% Identity
iTF_01325433;
80% Identity
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