Sleb006451.1
Basic Information
- Gene Symbol
- Git
- Assembly
- GCA_003285725.2
- Location
- NW:6152334-6156024[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-09 5.6e-05 22.8 0.3 16 48 474 506 468 508 0.94 2 2 0.014 93 2.9 1.0 17 46 652 681 651 691 0.87
Sequence Information
- Coding Sequence
- ATGTGTTTCGCCAGCAGTATAATAGAAGCGcataaaaagttatttatagCACCGCCAGAGGTTAACGACAGCTCCACGCCCTTAAGTGGCAGCAGTGGCATATTGAACTCTCGCAAGACTGCCCAGAAAATGCCGCGCAACAAATCTCGATTGCAGACGGATGTGTGTGGGGATTGTGGAGCAACGGATCCATCTTGGGCTTCCATTAACCGCGGCATCTTGTTGTGCGCCGATTGCTGTTCCGTGCATCGCAGTCTGGGGCGGCATATATCGATCGTGAAGTCGCTGCGTCAAGGAAACTGGGAACCATCGGTACTGAATTTCGTAAACTCACTGAATGCTCATGGCGCGAATAGCGTGTGGGAGCATCTTCTCGATGGGAACACTAATACTGCAAGTGGGAAGCATGGCACACGTTGGCGCAAACCCACGCCCAAAGATGCACTCCATCCGACTAAATCGGACTTTATTAAGGCCAAACACGTAAATTTGACGTTTGTGCTGAAGCCAAGTCTACAGGAGGATGATGATTCTagtagcggcagcagcaatcTGGAGCAGGAGCTCAGTAAGCAATTGCATGCCAGCGTACGGACCAGTAATCTGGAGACTTCACTGCGCTTCCTGGTGCAAGGTGCCGATCCCAACTTCTATCATGATGAGAAGTGCTCAACTCCACTGCATGTAGCTGCTAAATTTGGACAGGCTTCGCAAATTGAAATGCTGTTGGTGTATGGTGCCGATGTGAATGCTCTCGACGGAAATGGCAACACGCCACTGGAGCTCGCCAAGGCTAACAACCATAATACTATTGCCGAGCGCTTGCTGGATGCCATGTACGATGTGACCGATAGAATCATCATTTTTCTAGGAGGCAAGAAGCCCGATCATGCTAGTGGCCGTCATTTCATCATGCCCGAGCCAAATAGCGCAGATATAAGCGAGCAATTGAAAATAGCTCGTGGCAAGCTGCAATTGGTTCccaataaaatgtttgagGAGCTGGTAATGGACCTATATGACGAAGTAGACAGGCGGGAGTGCGAAGCCATTTGGTCCACCAGCACTTTAAATGCTGATCACGCAACTGTGCCATTTCTGCCAGCTAATCCATTTTTGAGCGCAACTCGCAATCAGGGTCGTCAGAAACTGGCACGTTTCAATCGCGCTGAATTCGCTGGACTTTTAACTGATGTCCTAACCGATGCGATACGTCGCCAGAATATGGCAAATTTACGTCCCCTAGATGCACACGCAGCGCAACCGCAGCCGACATCgggtatattttcaaataataattcggCTTTGTTTAATTCGTTCGAGCAAGCGCACGATCCGAATTTGTCCGATGATGAGCCCATCTACGATCCGGTGGCCAGCGACGATGACTATATGCCACCCATGGCGCAGCAGGCCATTGTGGAGACTTTGCGCAAGCAAATAAATCAGCTGAAGAACGTTGTGCAGAAACTGTCAACCGAAAACTCACAACTGAAATCAAAATTTACATCAAACACCAGCATATATGATGAACCACTTCGGATTGATCTGAACAGTTCCGATACAGATCATGAGCCACTATCTCTGCCAGAAGGCAGCAGCGCCCCTGTTGTTTCCGCTGACAGCACTTCAAATGCATCGTCATCGAATCAGTCGACAATCAAGCGGCCGGCCAGTATGTACGAAAGACGAATCGCACCTACCTTTGCCAAAGGAAACAACGATGTACGAAACACAACGAGCATGTACCAAATGGCTGGAGATGGAAAACCTTTTGGTGAAGAAGTGAAGGTACGATCGGATTTGGCAACTCGTTGCTTAAAAGGTCTGATACTGGCCATGCAACCGGGGCCGGAGGATCAAAAGCAATCAGTAGCCCTACATGGCGAGCGCATACGCAACGCAGTCACGGATCTGATAGCGCTCTATGCGAATTTgCCGCCCAACGCCAACGAAACTACTCGTGAAACACTGAAGCTACTTACACGTCACAACATCCTTATACAGCACGAATGTGAGAACCTACAGAAATCTATAGAAGCTGACGACAAAACGGCCATTCTAAAGAACACGGTGGAGGTGCGAAACTCGGCATTTCACATTGCAAGTGGCATAAAAACCTTGGTTCTGCAATTCTATTAA
- Protein Sequence
- MCFASSIIEAHKKLFIAPPEVNDSSTPLSGSSGILNSRKTAQKMPRNKSRLQTDVCGDCGATDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSVWEHLLDGNTNTASGKHGTRWRKPTPKDALHPTKSDFIKAKHVNLTFVLKPSLQEDDDSSSGSSNLEQELSKQLHASVRTSNLETSLRFLVQGADPNFYHDEKCSTPLHVAAKFGQASQIEMLLVYGADVNALDGNGNTPLELAKANNHNTIAERLLDAMYDVTDRIIIFLGGKKPDHASGRHFIMPEPNSADISEQLKIARGKLQLVPNKMFEELVMDLYDEVDRRECEAIWSTSTLNADHATVPFLPANPFLSATRNQGRQKLARFNRAEFAGLLTDVLTDAIRRQNMANLRPLDAHAAQPQPTSGIFSNNNSALFNSFEQAHDPNLSDDEPIYDPVASDDDYMPPMAQQAIVETLRKQINQLKNVVQKLSTENSQLKSKFTSNTSIYDEPLRIDLNSSDTDHEPLSLPEGSSAPVVSADSTSNASSSNQSTIKRPASMYERRIAPTFAKGNNDVRNTTSMYQMAGDGKPFGEEVKVRSDLATRCLKGLILAMQPGPEDQKQSVALHGERIRNAVTDLIALYANLPPNANETTRETLKLLTRHNILIQHECENLQKSIEADDKTAILKNTVEVRNSAFHIASGIKTLVLQFY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -