Basic Information

Insect: Scaptodrosophila latifasciaeformis
Gene Symbol: -
Assembly: GCA_037075145.1
Location: JBAMCM010000146.1:102577-116028[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1e-11 2.1e-08 33.9 0.0 1 40 592 632 592 635 0.90

2 4 7.4e-14 1.5e-10 40.8 0.1 2 39 647 684 646 687 0.94

3 4 1.3e-17 2.7e-14 52.8 0.0 1 45 701 746 701 746 0.98

4 4 8.4e-20 1.7e-16 59.8 0.0 1 43 753 796 753 798 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1e-11	2.1e-08	33.9	0.0	1	40	592	632	592	635	0.90
2	4	7.4e-14	1.5e-10	40.8	0.1	2	39	647	684	646	687	0.94
3	4	1.3e-17	2.7e-14	52.8	0.0	1	45	701	746	701	746	0.98
4	4	8.4e-20	1.7e-16	59.8	0.0	1	43	753	796	753	798	0.96

Sequence Information

Coding Sequence: ATGTTGTCCCATAACGGCGCTGTTGCTGTCGCTTTGCAACAGCTCTGCTGGCTGCCTTCAATCAGCCGCATTTACGGCAACTTTGGCGGTGACGAAGACAGCCCCGTCCCCGTCACTGGTCCGAAGGGGGCGGCAGGCAAGAAGggtCTCTTGCGTACCGCCGAACAGTTGAAAATCAAAGGTCTCTGCGAGACAGCTGAGAATGCGGATGATTTGAATGATTCGGCCACAGCCACCATAACCGTCTCTGAGAATATCCAACAATCGGTAGTGGGTAATATTGTGAATGCCGCTTTAGTCCCTGGACCTGCTTCGCCCAGCCCAGAGCAGCAggcccaacagcagcagcaacagcagcaagttcatgtgcaacaacagcagcagcagacacagcagcaacagcaattgGTGAACGCTGCTCTGCTCTCGCAACACAGTTTAACAAGCAGTTCAAGTGCCGCTCAATTGGCCAACGCCAGTGGTCAATTGCTGAGTTCCAGTTCGGGTGGCGCAAGCTCTACGAGCGCAGGCCTCCAGCATCAGACGGGGCAGGCCACAACGgtgcaacagcagcatcagcagcaaccGCAACAGCAGGTGGCACGTAAATCGCGTCTGCGCAAGCGCTCCAAGTCGCCAGATCTGCAGCTGGTAGCTGGTCAACAGCAGCCACCTACGGCCCATCATCATCCGCAGGCCATACTGATACAGGGCCAGAATCAAACCTCCATTGTGAGCCTGCAACAGACAGCCGACGGCAGTTATATACCGGTAGCATCCGggagcggcggcggcggcgccGGTGGCAGCGAGGACTCGGACAGCGATAAGCCGACAAAGATTTGCAAGACAGAGCTATCGGTCGCTTCGCCGGCATCCAATTCGTCGACATCGAATAATGCTGGTGGCGTGACCGGCGTGACAGCACCGGGCCAAGCCATCGTGACACAAATTGTAGTAGCGCGCGAcggaaaagataaaaatatgaCTAGTTTAGGCATGGGCATGAATGGAGGCCTATTAGGCGTGCCCATGGGATTTCTGGACTTTACACCCGAACCACCAGCACCATCGGCCACACCAGTCAACGTAACGGAACACGTCGACCTCTCCTGCAATCCCAGCACGGATACTCGTGATCTATCAAacCCCACCGAACCGCTCGATATTGACAATCATTTGGCTCAGCAAATCCACCGGCTCGATCAATCTCCAATGCACTCGATAGCGCACCACCACACCGGTGACGAGAGCAACTCGAATCTCGTACAGCATATTAAAAGTGAAGTTATTGAGGCGAAGCAACAGCAGCTAGCTGCCCAGCAGCATGCCCATCATCAGGCGCAAGCGCAGGCGCAGCATGCTCACCATCAGGTCCAGCAACATCACTTACATGCCCAGCAAATGCTGGCCCAATCCCAggcccagcaacagcagcagcagcaacagcaacagcagcaacaatcgCAGCATCATCCTTCCCAGGCATCGGTGCATGCCCAGCATCCGAGCCATGCCAGTCATCCGGATATAACGAGTGGTACAGTCATGGAGATTGATCCGAGCCAAATAAAACATGAGCCCGGCATGATTATAACGCCGGAAATTGTCAATATGATGTCCTCAGGACATATGGATATGTACAATTCGGATACGAGCGAGGATTCAATGATGATCGCGAATGGCTCTCCGCACGATCAGAACGAGCCACATTATACGAATTTGGACCAACAGCACGGCGGCCTCGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAGGCCTCTGCCATTTATGGCATCCCGTCAACCACTTTATGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCAAAGAAGGAGGGTGGCACCAAATCATGGAACGAAGATGCATTACAAAGTGCCTTGGAAGCACTACGCTCAGGTCAGATATCGGCTAACAAAGCGTCCAAAGCCTTTGGTATCCCATCATCGACCTTGTATAAAATAGCACGTCGTGAGGGTATACGTTTGGCAGCGCCCTTCAATGCCGCCCCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCCATACGCGCCGGTAATACATCTGTACAAAAAGCTAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATTGAATTATCGCGTTCGAATCCTACACCCTGGTCTGAAGATGCCATGAACGAGGCATTGAATTCGGTGCGTGTCGGTCAAATGTCCATCAATCAGGCGGCCATACATTACAACCTGCCCTACAGTTCGCTCTACGGACGCTTCAAGCGTGGCAAATACGATGTGGCCAACACCAGTGGAGTCTCACTGAACAGCACTTCAGGCAATACAACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGCTACACATGCTGCAGCAGCAGTTTTCGTACAGCCCCTCGCCGCATTCGGCCACACCACAGCATCACAGTACACCCCAAGGGCCGCCGACGCCGCAGCACATGCAACAGCATGTTGTACATATGCAGCAACAGTCGCCACACCAGGCCCATGCACACCAGCAGCACATTCAGCAACAGGATGTGGTCACCTCGAGCAGCCAAGTGGTGCATCCtggtcagcagcagcagcagcagcttcagCAGATCTATCAGCATCATGGCACGCCTGAGCGCAGTTGA
Protein Sequence: MLSHNGAVAVALQQLCWLPSISRIYGNFGGDEDSPVPVTGPKGAAGKKGLLRTAEQLKIKGLCETAENADDLNDSATATITVSENIQQSVVGNIVNAALVPGPASPSPEQQAQQQQQQQQVHVQQQQQQTQQQQQLVNAALLSQHSLTSSSSAAQLANASGQLLSSSSGGASSTSAGLQHQTGQATTVQQQHQQQPQQQVARKSRLRKRSKSPDLQLVAGQQQPPTAHHHPQAILIQGQNQTSIVSLQQTADGSYIPVASGSGGGGAGGSEDSDSDKPTKICKTELSVASPASNSSTSNNAGGVTGVTAPGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVNVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQHIKSEVIEAKQQQLAAQQHAHHQAQAQAQHAHHQVQQHHLHAQQMLAQSQAQQQQQQQQQQQQQSQHHPSQASVHAQHPSHASHPDITSGTVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGVSLNSTSGNTTGSIEIIEHSQENSLHMLQQQFSYSPSPHSATPQHHSTPQGPPTPQHMQQHVVHMQQQSPHQAHAHQQHIQQQDVVTSSSQVVHPGQQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00904678;
90% Identity: -
80% Identity: -