Slat009294.1
Basic Information
- Gene Symbol
- dl_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000217.1:11355887-11359058[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6 2.1e+04 -5.0 0.9 119 128 44 52 31 60 0.41 2 3 7.2e-75 2.5e-71 239.3 0.1 1 169 66 236 66 236 0.99 3 3 1.7 6e+03 -2.8 5.1 107 138 450 474 420 501 0.48
Sequence Information
- Coding Sequence
- ATGTTTCCGAATCAGAATTCAGTGGCCCCCGGAGCAGGCACAAATGGTCCTGGCGGTGCAACTGGAACTTCTCCCATGGACACTCAACAGCAACAGAGTCTTAATTACAATGgcttgcaacaacaacaacagcagcagcagcagcaacaacaacagcaacagcaagctAGTAAAAATTTGAGGAAAAAGCCTTATGTGAAAATCACAGAGCAGCCCGCCGGAAAAGCCTTACGCTTTCGTTATGAATGCGAGGGTCGTTCGGCCGGTTCGATACCGGGTGTCAATTCAACGCCTGAGAACAAAACCTATCCAACCATTGAAATTGTGGGCTACAAGGGACGCGCCGTAGTGGTCGTCTCTTGCGTGACCAAGGACACACCGCATCGTCCCCATCCACATAATCTGGTCGGCAAGGAGGGCTGCAAGAAGGGTGTCTGCACCCTGGAAATTAATAGTGAGACAATGCGTGCCGTGTTCAGTAATCTGGGCATACAATGTGTCAAGAAGAAGGACATCGAGGCAGCTCTGAAGGCACGCGAGGAAATCCGTGTAGATCCATTCAAGACTGGCTTCTCACATCGTTTCCAACCCTCGAGCATTGATTTGAATTCGGTGCGTTTGTGCTTTCAAGTTTTCATGGAGAGTGAGCAGAAGGGACGCTTCACTCAACCCCTGCCGCCCGTTGTCTCCGAGCCCATATTCGATAAGAAAGCTATGTCCGATCTGGTGATCTGCAGACTATGCAGCTGTTCGGCCACCGTTTTGGGCAATACACAAATCATTTTGCTGTGCGAGAAGGTAGCCAAAGAGGATATCGCTGTGCGTTTCTTTGAGGAGAAGAATGGACATGTCTGGGAGGCTTATGGAGAATTTCAGCACACCGATGTGCACAAGCAGACTGCCATTACATTTAAGACACCGCGTTATCATACGCTCGACATTACAGAGCCCGCCAAGgttTTCATACAATTACGTCGTCCGTCGGATGGTGTAACCAGCGAGGCCCTGCCTTTTGAATATGTGCCATTGGATTCAGGTAGGCATACGTTTTGGAATCTTCATCGGCATCTCAAACGGAAGCCGGACGAAGATCTATTTCAGCAAATTCTTTCCATCGATTCTGGTGTTGGGGCTGCCAAGCGTGAGGCACCCACGATTGAGGTTATTGATTTGAACACACCAGTTTTGGAGGATTCCGAACCGATTATAGAACAGGTGTTTGCAGCTGCCACTCCAGAGTCGGTGGTGACCACTGAAGATGTCACCGATCAGGCAACTGCCGAGGCAGAACGCTTGCGTACCGAGCAGGAAATTGATACGATTATTGATGAAAAGGTACGCGAGTTAGAGCAGATGgatcaacaacagcaacaacaacaagagcagcaacaacaagaggagcagcaacaacaacaagaacatttGCAACAACAGTTACAGCAACAattgcagcaacagcaacaggttGATAAGATTAATCAATGGATACAATCGAATGACTTGCAGGAACCGCTTGAGCAAAGCCCCCTGGGCGATCCCACTCTGGGCAGTGCCCATTTGGAGGTAACAGCTGCCCCTCAAGTCACCGAGGAAGACAAGACACTTAATGAATTTCTCGATCAAGTAGCCGAATTGGATGAAATCTACACTGACTATGTCCTACGTCGCGATACCTATAAGAATACCATACAGAATGAGCTGCAGACCATGGATCAAACAGCGGCCACTCGCCCGCCCCTGGAGGTAGAGGATAGCTTCGATGATGCTGCCACCTATACCAGTCTGCAAATTGCCTTTAAGAATCCCGTGCTCATACCCCTGGACGACATAATGCCACCCACACCGCCCATGTCGCAGTGTGCCCCTGAAGATGCTCAGCACTACGATCCAATCGAAATCAATAGCCAAGGGCTACAACAATCTAATCAAAACATAACCACACCACCAAGACCACCACATGCCAGCCCACAGCCTCAAACCTCACCCCACATGCATGTGACTGCTGCTGAGGAGGAGAAGCTGCCTCCTCTGCCACCCAAGCGTATACGCAAACAGGACAGCAATGCCGAGAATCGTTCCATTGAGGCAAACATTTGCAATACCCTAGAGCGCAAGTCTCAGTCCACAAATAGCAAGACCGATCCGGCGCCACCCAATAAACGCCTCCCACCCAAGCCGACCAACTTCAATACGCTGCCCAAGCAGAAAAAGCCCGGTTTCTTTTCCAAGATATTCCGGCGCAAGAGCAAGCCCGACTTGAACCAATCCAATGAAAATACCACTCCGGCAGGCTCCAAGCTCAGTTCAAAGGTGCCCACGCCCAATGGCAGTCGGGAGCCCAGCATTATGCACTTCAATATGAACGATCCCCTGAGGTCTTCTCTGCGATCGGCCAAGTCCCTACAGCCAAACTCGGCCACTTCAAGTCCCACTAAATCCAGTCCCTCCAAGAAAGCCATCAAGACGGGCAAGCCTTGCGGTCGCAGCGTAAGCAGCGTCTCCGGCAAAAGACCAGCTCACCTGAACGCCGATGTGGTGCACATACCACTCAAGGGTGACAGTGTCAATAGCTTACCCCAACAGGCCCAGAACGAAGCCTATTCAAATGCCAGCACCGTCACCTTAGATCGTCGCACCGCCTCGGCCCTACAGCTGGCTGAAATACCAATTTTAGAGGGTGGCATGGAACTGGTGGCCATTGCCGATCGCCAGAGTCTACACAATCTGGTTAGCTCTATGGAGGGCCAGTTTAATGTACAAATGGATCCAAATATGGACCTGACAGAAGTCGAACACTTTGCCCTGTACACCAGTGTGCCACCCCAGGCCACGGTCAGTGAATTCGATGAGACCTCCGCCTATTATGCACCCGTGGATGCTGGCGAGATTCTCACACCTGAACAGGTGGCCCAGCGTCTGGCGGCCGCAAATGTTAACCATTAA
- Protein Sequence
- MFPNQNSVAPGAGTNGPGGATGTSPMDTQQQQSLNYNGLQQQQQQQQQQQQQQQQASKNLRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPHRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTQPLPPVVSEPIFDKKAMSDLVICRLCSCSATVLGNTQIILLCEKVAKEDIAVRFFEEKNGHVWEAYGEFQHTDVHKQTAITFKTPRYHTLDITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDLFQQILSIDSGVGAAKREAPTIEVIDLNTPVLEDSEPIIEQVFAAATPESVVTTEDVTDQATAEAERLRTEQEIDTIIDEKVRELEQMDQQQQQQQEQQQQEEQQQQQEHLQQQLQQQLQQQQQVDKINQWIQSNDLQEPLEQSPLGDPTLGSAHLEVTAAPQVTEEDKTLNEFLDQVAELDEIYTDYVLRRDTYKNTIQNELQTMDQTAATRPPLEVEDSFDDAATYTSLQIAFKNPVLIPLDDIMPPTPPMSQCAPEDAQHYDPIEINSQGLQQSNQNITTPPRPPHASPQPQTSPHMHVTAAEEEKLPPLPPKRIRKQDSNAENRSIEANICNTLERKSQSTNSKTDPAPPNKRLPPKPTNFNTLPKQKKPGFFSKIFRRKSKPDLNQSNENTTPAGSKLSSKVPTPNGSREPSIMHFNMNDPLRSSLRSAKSLQPNSATSSPTKSSPSKKAIKTGKPCGRSVSSVSGKRPAHLNADVVHIPLKGDSVNSLPQQAQNEAYSNASTVTLDRRTASALQLAEIPILEGGMELVAIADRQSLHNLVSSMEGQFNVQMDPNMDLTEVEHFALYTSVPPQATVSEFDETSAYYAPVDAGEILTPEQVAQRLAAANVNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -