Spyr030367.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- -
- Assembly
- GCA_905146935.1
- Location
- LR989928.1:67552442-67552993[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 1.5e-06 28.6 0.0 1 40 16 55 16 59 0.92 2 2 4.5 5.8e+03 -2.1 0.0 34 44 123 134 118 135 0.77
Sequence Information
- Coding Sequence
- ATGGACAGCTCAGACAAAATAACGAAACGCCAATTTCATAATTACACCGAAGATGCGCTTAGTAACGCCTTAATAAAAATTAGAGAGCACAATTGGCCAATTAGAAAAGCAAGTAGGGAATACGGGGTTCCTAGAGGAACTTTACAAGACCGCATCCATGGCCGAGTTGTAGAAAAGCCAAGAAAAATGGGACCGGATACTGTCCTTAGTTTAGCCGAAGAGAATGAATTAGTAAAGTGGCTCGTAGACCTTGCTAAGTGTGGCTTTCCACAAAAGCCCTCGGACCTCTTGAATATGGTCCAAAAGATTCTCCGTGAGGATAAAAGAAAGACTCCATTTAAAGATTGCCTACCCGGTAAAACGTGGTACTACGCCTTCCTAAAGCGTCATCCTGAACTGTCCCTCAGAACACCAGAGGGACTCTCAAAAGGACGGGCTATCGTGACGGAGGAGTCAGTAAGGAAGTGGTTTCGGGAGCTGAAGCAATACTTAGATGAGATTGATGCAGCCGATATTTTGGATGTTGCCGAAGAAAAACAACCTGGTAAATAA
- Protein Sequence
- MDSSDKITKRQFHNYTEDALSNALIKIREHNWPIRKASREYGVPRGTLQDRIHGRVVEKPRKMGPDTVLSLAEENELVKWLVDLAKCGFPQKPSDLLNMVQKILREDKRKTPFKDCLPGKTWYYAFLKRHPELSLRTPEGLSKGRAIVTEESVRKWFRELKQYLDEIDAADILDVAEEKQPGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01396434;
- 90% Identity
- iTF_01396434;
- 80% Identity
- -