Spyr008960.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- bab2
- Assembly
- GCA_905146935.1
- Location
- LR989929.1:83742713-83747043[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-17 3.8e-14 52.9 0.0 2 43 61 103 60 105 0.95
Sequence Information
- Coding Sequence
- ATGGCTGCTAAACTGATTGAAGGAGCACATCCTTGGATGAGTGGAGCTGGGTCTTCGTCAGTTGCTGACAGCTACCAATACCAATTGCAATCCATGTGGCAGAAATGCTGGAACACAAACCAACAGAGCCTGGTACAACAGTTGCGCTTTCGCGAACGTGGACCTTTGAAATCATGGCGACCAGAGTCAATGGCCGAGGCTATTTTCAGTGTTCTAAAAGAGGGCCTGTCACTGTCGCAAGCAGCACGTAAATATGACATCCCCTATCCGACATTCGTTCTGTATGCGAACCGAGTGCATAATATGTTGGGACCATCTCTGGATGGCGGTACAGATCCCCGGCCCAAAGCACGAGGGCGTCCGCAAAGAATTCTGCTCGGAATGTGGCCAGAAGAGTTGATTCGATCCGTCATTAAAGCAGTCGTTTTTCGTGATTATCGCGAGATTAAGGAGGAAACAGTGCAGATGTATGCAAATGGTGGCGGTGGTGGTGCAGCTGCAACTGCTCATTCGTCTCAGTATGGAATGCCAGGAACTCCTACAAACGGCTCTTCATCTAATGGCTATCACAATAAACTGGGACTTCCTAGCGGATCACACCCATCGGATTCCGCAAGCCCTCTATCAACCATGGCAGAAACCCTCCGTCGTCAGATCCAAATGTCGCAGCAGTCCCCGTCCCCATCGCTCAATATGTACAAGTCGCCAGCCTTCCTGCAAAGGTCGGAAATGGAAGACCCAATGTCTAAGAGAAGCTCTTCCGAACATCATTTAGGGAATGCAAAGATGCCGGATAATATGCCCGACCTCAGTGCGTTGGGTCTAATGGGAATTCCTGGACTGAACGTCATTCCTCAAGGTCGCGGCCAGCATCAGATGCCCCATCAACAGCAACAACACCACCAACAAAATTCCTCCTATTCGAGTCGAGAACTGAAGGAGAGCATGCAGCAACACATGTCAAATGCAATGTCACAGGCCGCCGCTGTTGCCGCAGCATCAAGGCCCCAGCTACCCTACGGACAGCAACGAAGTGGCAGCTCGAATAGCAGCAGCGGTTCCCAACAGAAGCCCACAAGCAATTCACCCTTCTCCCTTAATTTCAAGTCCAAAGGTGACCCCTCGCCTTACAAGTTCCCCGATAAGCGAATGTTAGAAGGTCTCACGCCTGGCATAGATTTTGAGGCCATTGCCAATGGCTTGCTGCAAAAATCGCACAAGGCCTCTCCTCGTTTCGAAGACTTCTTTCCCGGGCCCGATGTGAGTGAACTTTTTGCGGCGAATTCAGCTTCCGAAGCGGCAGCTGGCTTCCCCATTAAAGATCATCCCATAGCGAAGATAAAGCTGGAACAACAGCACCACAGTTCCGACAACCATGAGGAATAA
- Protein Sequence
- MAAKLIEGAHPWMSGAGSSSVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYANGGGGGAAATAHSSQYGMPGTPTNGSSSNGYHNKLGLPSGSHPSDSASPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPMSKRSSSEHHLGNAKMPDNMPDLSALGLMGIPGLNVIPQGRGQHQMPHQQQQHHQQNSSYSSRELKESMQQHMSNAMSQAAAVAAASRPQLPYGQQRSGSSNSSSGSQQKPTSNSPFSLNFKSKGDPSPYKFPDKRMLEGLTPGIDFEAIANGLLQKSHKASPRFEDFFPGPDVSELFAANSASEAAAGFPIKDHPIAKIKLEQQHHSSDNHEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314190;
- 90% Identity
- iTF_00664768;
- 80% Identity
- -