Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383918.1:6219444-6234721[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0002 0.011 16.4 0.8 1 23 258 280 258 280 0.99

2 11 0.0053 0.29 12.0 3.8 1 23 288 311 288 311 0.94

3 11 0.0022 0.12 13.1 2.2 1 23 412 434 412 434 0.99

4 11 0.00022 0.012 16.3 2.2 2 23 443 465 442 465 0.97

5 11 0.46 25 5.9 3.7 1 23 469 491 469 491 0.98

6 11 0.00022 0.012 16.3 2.4 1 23 496 519 496 519 0.98

7 11 0.12 6.5 7.7 2.0 1 23 523 546 523 546 0.86

8 11 0.27 15 6.6 0.2 3 23 640 661 638 661 0.93

9 11 1.4e-06 7.8e-05 23.2 1.3 1 23 670 692 670 692 0.98

10 11 0.00019 0.01 16.5 0.8 1 23 698 720 698 720 0.97

11 11 1.2e-05 0.00065 20.3 4.7 1 23 726 749 726 749 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0002	0.011	16.4	0.8	1	23	258	280	258	280	0.99
2	11	0.0053	0.29	12.0	3.8	1	23	288	311	288	311	0.94
3	11	0.0022	0.12	13.1	2.2	1	23	412	434	412	434	0.99
4	11	0.00022	0.012	16.3	2.2	2	23	443	465	442	465	0.97
5	11	0.46	25	5.9	3.7	1	23	469	491	469	491	0.98
6	11	0.00022	0.012	16.3	2.4	1	23	496	519	496	519	0.98
7	11	0.12	6.5	7.7	2.0	1	23	523	546	523	546	0.86
8	11	0.27	15	6.6	0.2	3	23	640	661	638	661	0.93
9	11	1.4e-06	7.8e-05	23.2	1.3	1	23	670	692	670	692	0.98
10	11	0.00019	0.01	16.5	0.8	1	23	698	720	698	720	0.97
11	11	1.2e-05	0.00065	20.3	4.7	1	23	726	749	726	749	0.98

Sequence Information

Coding Sequence: ATGTTAGATCTAAAGGCTTGCCTGGTATGTTTTAATGATGACGTAAAGTTATATAGTCTAAAGAGCGGGAATTTGAGACGCGATTATAATTTGGTATCCGGTCTTCATACCCAGTCAGAAAACGGTTTGCCAGATTTTTTATGCGTGTATTGTTTGGCGTACGTACGTCGTTCCATACAATTTCGTGAGAGATGTCAACGGGCTCACTATGCTTTGCAGCAAATATTACAAAGAAGTTATCAGATTAAAAAGTCACATTTATTATCTTTCAATCGGGAAATGTTTGGTATAATGCCCCCGCTGTCATACATGATACCTGAAAAGCAACATTATGAAATTGTTAAATTCCAATGGGTTAAACATAACAGAGTTCCAGTAACTACAGGTGATGTGATATCCATAGTGCACTACAGTACATTAACAAGCCAAGACACATTTGTTGATATAATAGCACAAAACAATTCTGATGCCCCAAATGATTTTAAAACAGAAACATATGATGTAGAATATACTAATGATTTAGCTAAGGAAGAGAATTTAGTTGAAGTGGCAATTTTGAATACAGATAATATTGTATCAACTGGCGAGGAATACTTTGATGATATAAATTATTGCGAAGAGCAGAATGATTATTATATAGATAATACTGTTAAAGATGAGAATAAAGCTGACGGATCAAAACTTGAGGAGGAATATGCGAGTATATTTGCAATTTCAGTGAGAGAAGCTAAAGCTGCATTGGAAATTTACAAAATGTTTGGTAAGGGAAAGTATACCTGTGAAGTGTGCAGTAGGAGATACCAGAATGAAGAAAGGTTAAATATACATATGAGAATGCATGATAAACACACAAGTGGTAATTATCATTGTAATCTGTGTGATTATTTTTACAAAACTGAATTCTTACTTCAAACTCATATGACTGAGAAACATATGTATAAGTATGTATGTAGAAAATGCTGTGAAGTTAGCTTTGATAGAACAACAGCTAAACAACATTACATATTGACACATCTTCAGAAAGGTGAGAAGAAGAATGCCAACTGGTATGAATCTCGACCGAGTTGGCTGAGCAGCAAAGGAGGGAAGAGAAGAAAGGGTGTAGTTACATTACGTCCAGTCAGAAAGAAGAAATTACCTGACGATTTCCTAATCTACAGCCCTATAAGCCAAGAGGAACAGTACCAAATCGTACAGGACCGAAAGAAGACCAGTAACTATACTGATTCCCTTTTTAAGTGTGAGTTTTGCTATAGAGGCTTTCGAGAGGTGGGAACTTATGAAAAACATATGAAAAAACACAACCCGGAACTTTGCGGCCCTCTACAATGTGATATGTGCAAACTATACTTCCGGGATCAGAGGAAATTGTATAAACATATGAATACATCACATCTTTTTAAATACACTTGCCAATTGTGCAGCTTTTCATGTGTGAATCGGGGTCAAGCGCACGCGCATTACAAATGGCATAAAAATGTAACATATTCTTGTCCACACTGTGATAAAATATTTAAGAAGATATCAACTCGTCTAACACACATAAGGGTGAAACATCCATCGACATTTGTGTGCAACCTGTGCGGCCACAGTTTCGTCAGTGAGAACGGTCTCTACTGCCATAAACAAATCGCGCACACTTTACAGGAGCGGGAAATGAGTGAATCAGCTCCCATGAACACGTCGGATCCATATTACTGCGAGGATTGCTCCGTTCAGTTCCTCAGCGAGATCGCGTTCGCCACACACCTCGGCAGCTCCAGCAAGCACGCCTCCACTAACCTTTCAATAAAGCCGAGGCGCAGGAGCGAGCTCGCGCACAAGTACCACAAGACGAACCCCAAGCGGCGAGGCAGACCGCGCATGCGCGGGACCAGCTCCGAGATCGTTAACAACGGGATCTCGACCTCCACCAACTGCGAAGTGTGTGGTAAGTTCTTGGTGAATGACGTTCAGGCCCGCAAGCATTACGAGTCCGAGCACCCCGGTACAGATTATCTGAAGCGGTACATGTGCGACGTCTGCGGGCACACCACCAGGCAATACGCGAACCTGACGGCCCACATGCGCACGCACACGAACGAGAAGCCGTACGAGTGCCCGCACTGCGAGAGACGATTCAGTATGCCCAGCAACAGGGACCGCCATCTTGTTGTGCATACCGGTGAGAAACGGTTTCAGTGTCACCACTGTAACCGTCGCTTCACTCAGAGCAGCGCGGTGAAGCTCCACATACAGACCGTGCATTTGAAGATACCGTACGCGCCCTGGGAGAAGAAGAACAGGAAGCGGCGCAAGGAGCCCGAGGGGGCCAGCGCTCAGGACTCGGCCGTGCTGTCCGCGAACCCGGCCTGCCTACCGACACATCACAAGCTACTATTGGACACCCAGGGGGATTACCTGAACGCCTATATCACTTATAATGATGTCTGA
Protein Sequence: MLDLKACLVCFNDDVKLYSLKSGNLRRDYNLVSGLHTQSENGLPDFLCVYCLAYVRRSIQFRERCQRAHYALQQILQRSYQIKKSHLLSFNREMFGIMPPLSYMIPEKQHYEIVKFQWVKHNRVPVTTGDVISIVHYSTLTSQDTFVDIIAQNNSDAPNDFKTETYDVEYTNDLAKEENLVEVAILNTDNIVSTGEEYFDDINYCEEQNDYYIDNTVKDENKADGSKLEEEYASIFAISVREAKAALEIYKMFGKGKYTCEVCSRRYQNEERLNIHMRMHDKHTSGNYHCNLCDYFYKTEFLLQTHMTEKHMYKYVCRKCCEVSFDRTTAKQHYILTHLQKGEKKNANWYESRPSWLSSKGGKRRKGVVTLRPVRKKKLPDDFLIYSPISQEEQYQIVQDRKKTSNYTDSLFKCEFCYRGFREVGTYEKHMKKHNPELCGPLQCDMCKLYFRDQRKLYKHMNTSHLFKYTCQLCSFSCVNRGQAHAHYKWHKNVTYSCPHCDKIFKKISTRLTHIRVKHPSTFVCNLCGHSFVSENGLYCHKQIAHTLQEREMSESAPMNTSDPYYCEDCSVQFLSEIAFATHLGSSSKHASTNLSIKPRRRSELAHKYHKTNPKRRGRPRMRGTSSEIVNNGISTSTNCEVCGKFLVNDVQARKHYESEHPGTDYLKRYMCDVCGHTTRQYANLTAHMRTHTNEKPYECPHCERRFSMPSNRDRHLVVHTGEKRFQCHHCNRRFTQSSAVKLHIQTVHLKIPYAPWEKKNRKRRKEPEGASAQDSAVLSANPACLPTHHKLLLDTQGDYLNAYITYNDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00114396;
90% Identity: iTF_00114396;
80% Identity: -