Basic Information

Insect: Antheraea yamamai
Gene Symbol: -
Assembly: None
Location: AY:343573-370517[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00014 0.0064 16.6 0.8 1 23 162 184 162 184 0.99

2 12 0.0049 0.23 11.7 3.9 1 23 192 215 192 215 0.94

3 12 0.0098 0.46 10.8 2.8 1 23 316 338 316 338 0.99

4 12 0.00015 0.0069 16.5 2.2 2 23 347 369 346 369 0.97

5 12 0.31 14 6.1 3.7 1 23 373 395 373 395 0.98

6 12 0.00015 0.0071 16.5 2.4 1 23 400 423 400 423 0.98

7 12 0.08 3.8 7.9 2.0 1 23 427 450 427 450 0.86

8 12 4.2 2e+02 2.5 0.2 1 19 469 487 469 490 0.76

9 12 0.18 8.6 6.8 0.2 3 23 544 565 542 565 0.93

10 12 9.6e-07 4.5e-05 23.4 1.3 1 23 574 596 574 596 0.98

11 12 0.00013 0.006 16.7 0.8 1 23 602 624 602 624 0.97

12 12 7.9e-06 0.00038 20.5 4.7 1 23 630 653 630 653 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00014	0.0064	16.6	0.8	1	23	162	184	162	184	0.99
2	12	0.0049	0.23	11.7	3.9	1	23	192	215	192	215	0.94
3	12	0.0098	0.46	10.8	2.8	1	23	316	338	316	338	0.99
4	12	0.00015	0.0069	16.5	2.2	2	23	347	369	346	369	0.97
5	12	0.31	14	6.1	3.7	1	23	373	395	373	395	0.98
6	12	0.00015	0.0071	16.5	2.4	1	23	400	423	400	423	0.98
7	12	0.08	3.8	7.9	2.0	1	23	427	450	427	450	0.86
8	12	4.2	2e+02	2.5	0.2	1	19	469	487	469	490	0.76
9	12	0.18	8.6	6.8	0.2	3	23	544	565	542	565	0.93
10	12	9.6e-07	4.5e-05	23.4	1.3	1	23	574	596	574	596	0.98
11	12	0.00013	0.006	16.7	0.8	1	23	602	624	602	624	0.97
12	12	7.9e-06	0.00038	20.5	4.7	1	23	630	653	630	653	0.98

Sequence Information

Coding Sequence: ATGTCTCCTCTGTCGTACATGATTTCTGAAAAGCAACATTATGAGATGGTCAAATTCCACTTAGTTAAACATAACAGATTTCCCGTAACTACTGATGATGTGATTCCTATAGCCCACTATAGTACACTAACAAACCAGGATACATTTGTTGATACAATACAGAACAATACCGATGTACAAAATGATTTTAAAACAGAACAGTATGATGTAGAATTTAGTAATAATTTAGCTAAAGAAGAGCATTTTGTTGAAGTGTCAAATACAAATGATGTAACGACTGGCGAGGAATATTTTGAAGATGTACCGAATGACGATATTAATTATTGCGAAGAACAAAACGATTACTATATAGATAATAATGTTAGAGATGAGAATAAAGCAGACGGATCAAAACTTGAGGAGGAATATGCGAGTATATACGCAATTTCGGTGAGAGAAGCTAAAGCTGCATTGGAAATTTACAAAATGTTTGGTAAGGGAAAGTACACTTGTGAAGTGTGCAGTAGAAGGTACCAGAATGAAGAAAGATTAAATATACATATGAGAATGCACGATAAACATACAAGTGGTAACTTTCATTGTAATTTATGTGATTATTTTTATAAAACGGAATTCTTACTTCAGACTCATATGACTGAAAAACATATGTACAAATATGTTTGTAGAAAATGCTGTGAAGTTAGCTTTGATAGAACGACAGCAAAACAACATTACATATTGACACATCTTCAGAAAGGTGAAAAGAAGAATGCTAACTGGTATGAATCTCGACCGAGCTGGCTCAGTAGTAAAGGCGGGAAGAGAAGAAAAGGTGTAGTTACACTACGTCCCGTCAGAAAGAAGAAATTACCTGAAGATTTTCTTATATACAGCCCTATAAGTCAAGAGGAACAGTATCAGATAGTGCAGGACCGAAAGAAGACGAGTAATTACCTTGATTCCCTTTTCAAATGTGAGTTTTGTTATAGAGGCTTTCGAGAGATGGGCACTTATGACAAGCATATGAAAAAACATAATCCGGAACTTTGCGGCCAATTACAGTGTGATATGTGTAAACTGTACTTCCGAGATCAGAGGAAATTGTATAAACATATGAACACATCGCATCTCTTTAAATACACTTGTCAATTGTGCAGCTTCTCATGTGTAAATAGGGGTCAGGCGCATGCGCACTACAAATGGCACAAAAATGTAACATACTCTTGTCCGCACTGTGATAAAATATTTAAGAAGATATCGACTCGTCTAACCCACATAAGAGTGAAACACCCATCGACGTTTGTCTGCAATCTGTGTGGTCACAGCTTCGTCAGTGAGAACGGCCTCTACTGTCACAAACAAATCGCACACACTCTAGAGGAGCGGGAGATGAGTGAATCTGTGCCTGTAAATACGTCAGATCCATATTACTGTGAAGATTGCTCGGTACATTTCCTCAGTGAAATGGCATTTGCTACCCATCTTGGCAGTTCCAGTAAACACGCTTCAACTAACCTTTCAATAAAGCCGAGACGCAGGAGCGAACTCGCGCACAAATACCACAAGAGTAACCCGAAGCGAAGAGGCAGACCCAGAGTTCGTGGCACCAGCTCCGAGATCGTTAACAACGGCATTTCCACCTCCACCAACTGTGAAGTCTGTGGCAAGTTCCTGGTGAACGACGTGCAAGCTCGCAAGCACTATGAGTCCGAGCATCCCGGTACTGACTATCTCAAGCGTTACATGTGTGACGTCTGCGGACACACCACCCGGCAATACGCGAACTTGACTGCGCACATGCGAACGCACACGAACGAGAAGCCGTACGAGTGTCCACACTGCGAGAGGCGGTTCAGTATGCCCAGCAACAGGGACCGACATCTTGTTGTACATACCGGAGAGAAACGATTCCAGTGTCATCACTGTAACCGTCGGTTCACACAGAGTAGTGCTGTTAAACTGCACATACAGACAGTTCACTTGAAAATACCATATGCACCATGGGAGAAGAAGAATAGAAAACGCCGTAAGGAGCCAGAGGGAGCCAGCACTCAGGAGTCTGCTATACTGCCTGTTAATCCAACCTGTCTGCCGGCACACCACAAGCTCCTACTCGACACCCAAGGGGATTACCTCAACGCCTACATCACTTACAATGATGTCTGA
Protein Sequence: MSPLSYMISEKQHYEMVKFHLVKHNRFPVTTDDVIPIAHYSTLTNQDTFVDTIQNNTDVQNDFKTEQYDVEFSNNLAKEEHFVEVSNTNDVTTGEEYFEDVPNDDINYCEEQNDYYIDNNVRDENKADGSKLEEEYASIYAISVREAKAALEIYKMFGKGKYTCEVCSRRYQNEERLNIHMRMHDKHTSGNFHCNLCDYFYKTEFLLQTHMTEKHMYKYVCRKCCEVSFDRTTAKQHYILTHLQKGEKKNANWYESRPSWLSSKGGKRRKGVVTLRPVRKKKLPEDFLIYSPISQEEQYQIVQDRKKTSNYLDSLFKCEFCYRGFREMGTYDKHMKKHNPELCGQLQCDMCKLYFRDQRKLYKHMNTSHLFKYTCQLCSFSCVNRGQAHAHYKWHKNVTYSCPHCDKIFKKISTRLTHIRVKHPSTFVCNLCGHSFVSENGLYCHKQIAHTLEEREMSESVPVNTSDPYYCEDCSVHFLSEMAFATHLGSSSKHASTNLSIKPRRRSELAHKYHKSNPKRRGRPRVRGTSSEIVNNGISTSTNCEVCGKFLVNDVQARKHYESEHPGTDYLKRYMCDVCGHTTRQYANLTAHMRTHTNEKPYECPHCERRFSMPSNRDRHLVVHTGEKRFQCHHCNRRFTQSSAVKLHIQTVHLKIPYAPWEKKNRKRRKEPEGASTQESAILPVNPTCLPAHHKLLLDTQGDYLNAYITYNDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00112776; iTF_01317641; iTF_01312542;
90% Identity: iTF_00112776; iTF_01317641;
80% Identity: -