Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383922.1:8799844-8808103[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5e-06 8.3e-05 23.1 0.4 1 23 162 184 162 184 0.97

2 14 0.01 0.57 11.0 2.7 1 23 190 213 190 213 0.94

3 14 3.6e-05 0.002 18.8 0.1 1 23 219 241 219 241 0.98

4 14 2e-05 0.0011 19.6 2.4 1 23 246 268 246 268 0.99

5 14 9.6e-06 0.00053 20.6 3.7 1 23 274 296 274 296 0.98

6 14 6.7e-07 3.7e-05 24.2 1.0 1 23 302 325 302 325 0.96

7 14 2.4e-05 0.0013 19.3 2.7 1 23 331 353 331 353 0.97

8 14 1.7e-05 0.00095 19.8 0.8 1 23 359 381 359 381 0.98

9 14 6.5e-05 0.0036 18.0 2.1 1 23 387 409 387 409 0.99

10 14 1.3e-07 7.4e-06 26.4 0.4 1 23 415 437 415 437 0.97

11 14 1.5e-05 0.00081 20.0 6.0 1 23 443 465 443 465 0.98

12 14 0.098 5.4 8.0 3.2 1 23 471 490 471 490 0.95

13 14 7.7e-07 4.2e-05 24.0 0.4 1 23 496 518 496 518 0.98

14 14 0.0015 0.083 13.7 4.3 1 23 524 546 524 546 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5e-06	8.3e-05	23.1	0.4	1	23	162	184	162	184	0.97
2	14	0.01	0.57	11.0	2.7	1	23	190	213	190	213	0.94
3	14	3.6e-05	0.002	18.8	0.1	1	23	219	241	219	241	0.98
4	14	2e-05	0.0011	19.6	2.4	1	23	246	268	246	268	0.99
5	14	9.6e-06	0.00053	20.6	3.7	1	23	274	296	274	296	0.98
6	14	6.7e-07	3.7e-05	24.2	1.0	1	23	302	325	302	325	0.96
7	14	2.4e-05	0.0013	19.3	2.7	1	23	331	353	331	353	0.97
8	14	1.7e-05	0.00095	19.8	0.8	1	23	359	381	359	381	0.98
9	14	6.5e-05	0.0036	18.0	2.1	1	23	387	409	387	409	0.99
10	14	1.3e-07	7.4e-06	26.4	0.4	1	23	415	437	415	437	0.97
11	14	1.5e-05	0.00081	20.0	6.0	1	23	443	465	443	465	0.98
12	14	0.098	5.4	8.0	3.2	1	23	471	490	471	490	0.95
13	14	7.7e-07	4.2e-05	24.0	0.4	1	23	496	518	496	518	0.98
14	14	0.0015	0.083	13.7	4.3	1	23	524	546	524	546	0.98

Sequence Information

Coding Sequence: ATGACGGAGACTTGGAATATTAGTGCTTTGTGCCGTTGTTGTCATGCAGAAGGAAATTTTAAAAATCTAGAGTCCCTATTTTCTTATGAAGGCGAGGAAAATACATATACTAATATGTTAAAAGAAACTTTTGATGTAATTATTAGCCCGTTTCCTACAGATAATGGTACACTGTACAGTATTTGTGGTACATGTGAGCCACGTCTTCGAGATGCTGTCCAGTTCAAAAGGCAAGTGGTGGCCTGTGAAGAGAAATTCAAAAGATACTACCCATTTAAAGACAATACAAAAGTGCCTTCAATGGAGATTTTTATAGAATCGGCTCTGGAGGTGGATGATCAACCTCTATCGATGATTAGAACAGTTAGTAAAAAAGAAGTGGAAGTTGATGTATGTTCCGGTGAAGAGTTTGCTGAAGATTGGGCACATCAGGATGTCAGCGATGCAGAATCATTAAAAACGAGAAAAGTGAAAGCAAAGAAATACGCCTGTGATATATGCCAGAAGAAATTCACATACAACGGTTCCCTGGAGGTCCATATGAAGTTGCATAATGGAGAGAAAACGTACACTTGCCCTCTCTGTCACACATCACATATAAATAATAAGGAACTGACGAGGCATATATCAGATAATCATTGTATCaacggcgcattcccttgtaatatgtgcggggaggtctatgagaaagccagtgtattgaaaaaacatctttcaacccactacgaacaaaaatttacatgtactgtgtgctccaaagaatttcaacggaaaaaaggtttaaaagaacatctcaagacacacacaggagagaagaaattcacgtgcaatatatgtaacaagtctttcggtcataaccaaacattaaaatctcacatctacacccatactggagaaaaaccctacgtttgtgacgtctgcggacgtcgattcccccagcggacacatctcaaaagacacatatatataattcacaatcaaatgaagccccactcgtgtacgatatgccagaagcagttttcaagcaagagttatttggctatacatgagagacagcataccggcgaacgtccctactcctgtgaggtctgtaagaaagatttcaccgcatacacaacgttaaaagtccacatgagagtccacactggtttcaaaccgtactcgtgcagtttctgtaaccgtcagtttgcacagatggccagtttcaaagtgcaccaacgcacgcacaccggtgagaagcctttcgcatgcaaaatatgtaagaaaccgttctcagataacggttacctaaagattcatatgagagtacattccggagagaaaccatactgctgtgagatctgcaagaggtgtttcagagaaacgggtcaactgaagaggcatatgagagttcacaccggaattaaaccatatacatgcaagatctgtaataaacagattggtaacttgtccaagcatatgaggatacattcagaagaacgtcccttcaattgccctgtgtgtaacaaacagttttcgataagcggtaaccttaagttacatatgagggtgcacagcggtgagaaaccgttctcttgtgagttctgcagtagtcagttcacgcaaagcagtggcttgaaaaggcacagatgtattcaCGGTAAGAATGATGGATGA
Protein Sequence: MTETWNISALCRCCHAEGNFKNLESLFSYEGEENTYTNMLKETFDVIISPFPTDNGTLYSICGTCEPRLRDAVQFKRQVVACEEKFKRYYPFKDNTKVPSMEIFIESALEVDDQPLSMIRTVSKKEVEVDVCSGEEFAEDWAHQDVSDAESLKTRKVKAKKYACDICQKKFTYNGSLEVHMKLHNGEKTYTCPLCHTSHINNKELTRHISDNHCINGAFPCNMCGEVYEKASVLKKHLSTHYEQKFTCTVCSKEFQRKKGLKEHLKTHTGEKKFTCNICNKSFGHNQTLKSHIYTHTGEKPYVCDVCGRRFPQRTHLKRHIYIIHNQMKPHSCTICQKQFSSKSYLAIHERQHTGERPYSCEVCKKDFTAYTTLKVHMRVHTGFKPYSCSFCNRQFAQMASFKVHQRTHTGEKPFACKICKKPFSDNGYLKIHMRVHSGEKPYCCEICKRCFRETGQLKRHMRVHTGIKPYTCKICNKQIGNLSKHMRIHSEERPFNCPVCNKQFSISGNLKLHMRVHSGEKPFSCEFCSSQFTQSSGLKRHRCIHGKNDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00114273;
90% Identity: -
80% Identity: -