Basic Information

Insect: Antheraea yamamai
Gene Symbol: -
Assembly: None
Location: AY:96431-108981[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2e-06 5.8e-05 23.0 0.4 1 23 184 206 184 206 0.97

2 14 0.054 2.5 8.4 2.1 1 23 212 235 212 235 0.95

3 14 0.00025 0.012 15.8 0.4 1 23 241 263 241 263 0.96

4 14 1.6e-05 0.00076 19.5 2.4 1 23 268 290 268 290 0.99

5 14 7.8e-06 0.00037 20.5 3.7 1 23 296 318 296 318 0.98

6 14 5.4e-07 2.6e-05 24.2 1.0 1 23 324 347 324 347 0.96

7 14 1.9e-05 0.00091 19.3 2.7 1 23 353 375 353 375 0.97

8 14 1.4e-05 0.00067 19.7 0.8 1 23 381 403 381 403 0.98

9 14 5e-05 0.0023 18.0 2.2 1 23 409 431 409 431 0.99

10 14 1.1e-07 5.2e-06 26.3 0.4 1 23 437 459 437 459 0.97

11 14 1.3e-05 0.00061 19.8 6.0 1 23 465 487 465 487 0.98

12 14 0.074 3.5 8.0 3.1 1 23 493 512 493 512 0.95

13 14 1.8e-06 8.7e-05 22.5 0.8 1 23 518 540 518 540 0.98

14 14 0.0011 0.054 13.7 4.3 1 23 546 568 546 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2e-06	5.8e-05	23.0	0.4	1	23	184	206	184	206	0.97
2	14	0.054	2.5	8.4	2.1	1	23	212	235	212	235	0.95
3	14	0.00025	0.012	15.8	0.4	1	23	241	263	241	263	0.96
4	14	1.6e-05	0.00076	19.5	2.4	1	23	268	290	268	290	0.99
5	14	7.8e-06	0.00037	20.5	3.7	1	23	296	318	296	318	0.98
6	14	5.4e-07	2.6e-05	24.2	1.0	1	23	324	347	324	347	0.96
7	14	1.9e-05	0.00091	19.3	2.7	1	23	353	375	353	375	0.97
8	14	1.4e-05	0.00067	19.7	0.8	1	23	381	403	381	403	0.98
9	14	5e-05	0.0023	18.0	2.2	1	23	409	431	409	431	0.99
10	14	1.1e-07	5.2e-06	26.3	0.4	1	23	437	459	437	459	0.97
11	14	1.3e-05	0.00061	19.8	6.0	1	23	465	487	465	487	0.98
12	14	0.074	3.5	8.0	3.1	1	23	493	512	493	512	0.95
13	14	1.8e-06	8.7e-05	22.5	0.8	1	23	518	540	518	540	0.98
14	14	0.0011	0.054	13.7	4.3	1	23	546	568	546	568	0.98

Sequence Information

Coding Sequence: ATGACGGAAATTGGGAATATTAGCGCCTTGTGTCGTTGCTGTCATGCAGAAGTTAATATTAAAAACATAGCGACCTCATCCATTTATGACAGTGTAGAATATATATATACAAATATGTTGAAATCAACTTTTGATATAGAATTAACCCCAAACCTTAGTGAAGATGACGTCCCTTTTAATATCTGTGGTACTTGTGAGCCCCGTCTCAGAGATGCTGCCCAGTTTAAAAGACAAGTGGTGGCTTGTGAAGAGAAATTAAAGAATTACTTAACACTTCATAGCAAGAAGCTGCTAAGAGATCCGGAGGGGGTATGTGACAAAAATGTCAAAGAAGAAGTGGATAACTTTCAAGAAGATGTAAAAATACCTTCGGTGGAGATTTTCATAGAATCTGCTCTGGAGGTCGACGATCAGCCGCTGTCGATGATTCGGACCGCTGGAAAAAGAAAAGTGGAAGTTGATGTGTGTTCCGATGAGGAGTTTGGTGAAGATTGGGCACAACAGGATATTAGCGATGAAGAACCATTAAATACCAAGAAAACTAAAAAGTACGCCTGTGATATATGTCAAAAGAAGTTCACGTATAACGGTTCTCTAGAGGTTCATATGAAGTTGCATAATGGAGAGAAAACATACACTTGCCGTCTCTGTCAAACATCACATATAAATAATAAAGAACTCACAAGACATATATCAGAAAACCATTGCATCGACGGTACGTTCCCGTGTAATATCTGCAGAGAAGTTTTTGAAAAAGCCACTCTATTAAAAAAACACTTTTCAATCCACTACGAACAGAAATTCACATGTACCGTATGCTCTAAAGAATTCCAACGGAAGAAAGGCTTAAAAGAACACCTCAAAACGCACACTGGAGAGAAGAAATTCACTTGTAATATATGTAACAAGTCATTCGGTCATAACCAAACATTAAAGTCACACATCTACACTCATACCGGAGAGAAGCCTTACGTTTGTGACGTCTGTGGACGTAGATTCCCTCAGCGGACACATCTGAAACGACATATATATATAATCCACAATCAAATGAAACCGCACTCATGTACGATATGCCAGAAGCAGTTTTCAAGCAAGAGCTACTTGGCTATACACGAAAGGCAGCATACCGGTGAACGACCGTACTCCTGTGAGGTCTGCAAGAAAGACTTCACAGCGTACACAACATTGAAAGTACATATGAGAGTTCATACCGGTTTTAAACCATACTCGTGTACTTTCTGTAACCGTCAGTTCGCACAGATGGCAAGTTTCAAAGTTCACCAACGTACCCACACCGGAGAGAAGCCATTTGCATGTAAGATATGTAAGAAACCGTTCTCGGATAACGGTTATTTGAAGATTCACATGAGAGTGCACTCCGGAGAGAAGCCGTACTGCTGTGAGATCTGCAAAAGATGCTTCAGAGAGACGGGACAATTGAAGAGGCATATGAGAATTCATACAGGAATCAAACCGTACACATGCAAGATCTGCAATAAACAGATCGGTAACTTATCGAAGCATATGCGGATACATTCAGAGGAAAGACCGTTCAACTGTACTGTCTGTAATAAACAGTTCTCGATCAACGGTAACCTAAAGTTACATATGAGAGTTCATAGCGGTGAAAAACCGTTCTCGTGTGAGTTCTGCAGTAGTCAGTTCACACAGAGCAGCGGTTTGAAGAGGCATAGATGTGTCCACGGGAAGAATGATGGATGA
Protein Sequence: MTEIGNISALCRCCHAEVNIKNIATSSIYDSVEYIYTNMLKSTFDIELTPNLSEDDVPFNICGTCEPRLRDAAQFKRQVVACEEKLKNYLTLHSKKLLRDPEGVCDKNVKEEVDNFQEDVKIPSVEIFIESALEVDDQPLSMIRTAGKRKVEVDVCSDEEFGEDWAQQDISDEEPLNTKKTKKYACDICQKKFTYNGSLEVHMKLHNGEKTYTCRLCQTSHINNKELTRHISENHCIDGTFPCNICREVFEKATLLKKHFSIHYEQKFTCTVCSKEFQRKKGLKEHLKTHTGEKKFTCNICNKSFGHNQTLKSHIYTHTGEKPYVCDVCGRRFPQRTHLKRHIYIIHNQMKPHSCTICQKQFSSKSYLAIHERQHTGERPYSCEVCKKDFTAYTTLKVHMRVHTGFKPYSCTFCNRQFAQMASFKVHQRTHTGEKPFACKICKKPFSDNGYLKIHMRVHSGEKPYCCEICKRCFRETGQLKRHMRIHTGIKPYTCKICNKQIGNLSKHMRIHSEERPFNCTVCNKQFSINGNLKLHMRVHSGEKPFSCEFCSSQFTQSSGLKRHRCVHGKNDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01316578; iTF_01312390; iTF_01317503;
90% Identity: -
80% Identity: -