Spav010234.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:1962213-1964832[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0053 6.8 7.1 1.8 5 43 90 124 86 125 0.82 2 9 0.015 19 5.6 0.5 16 33 153 170 144 176 0.77 3 9 0.0065 8.4 6.8 0.8 14 43 184 210 179 211 0.87 4 9 0.00057 0.73 10.2 6.4 9 43 242 271 234 272 0.84 5 9 0.1 1.3e+02 3.0 0.1 35 43 292 300 281 301 0.79 6 9 0.00092 1.2 9.5 0.7 13 43 308 335 303 336 0.88 7 9 0.038 49 4.3 0.5 15 39 395 416 389 421 0.73 8 9 0.0034 4.4 7.7 1.0 17 43 458 481 446 482 0.75 9 9 0.077 1e+02 3.4 0.2 22 43 492 510 486 511 0.78
Sequence Information
- Coding Sequence
- ATGACCATAAAAACGGAGAGCCTAGAAGAGCAAGACATTAATTGTGATAATTCTGGACCGTCTACCGTACATTATAATGTCCCAGTAACTACTCAAGAACTTAAACACAATTTAAGTGGTAGAATATTCAAAAATAATCTCAATTTATTAAAATGCAATGATGAGCACATAAAAATTGAAATAAACACACCGACGGATAATGAATTTAATGAGTTAGACCAGAGCCAACATTTCGAGAAACATTATGATAACTATAATAAAATGCTTACACACGTCACTGATGTTCACAGCGAGAATAATCACAAATGTGAAATATGTGGAATCCGATTTAATAGCGTACCTAATCTCAAAAGTCACATCAAACTTTTACACGAACTTAAGAATTTACCCAATCAAGTACTTAATAATTTACCAAATCAAGTATTTAATAATTTACCAAATCAAGTAACTCCAAACGATATGAAATGTATATATTGCAATGTAGATTTCAAACGTAAATATAGTTTGAATAACCATATGAAGCTATGTCGTATTGGTAAAGAGGATGAGGAAAGTAAATATAAATGTGACTCGTGCGAGCGCGTTTATAAAAATAGAAAGTCTTTAGTAAAACATATAAAAAAGATTCATTATGACTATGGGAGAATGTTTGAGTGTTGGTGCGGGAAACAGTTCCCTTCACCGATACACTTGACTATACATAAGAGCTTGCGACATTATACTAATAAGAAAAATGAATTATACAAATGTAAATTCTGCGAGGCGGTGTATAATATGAAGAACAGTTTAACAAGGCATATGAAGAGAACTCATTATGATTACGGCAGTACGTTTGACTGTTGGTGCGGGAAACAGTTTCGTACACCGCAATACTTACGTGAGCATATGAGACGGCAGCATGGGAGCGAAATGAAAGATAAAAATAACGACAAAGTTCAGTGTGATTTTTGCCAAAAAACCTTCCAAACTAAACACTATTTATTGACGCACATAAAAAGTGTTCATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTTCGTACGCCGATACTTTTAAGCAACCATAAGAGACGGCACCCCAATAGTAACATTAATGATACGAATAATGACAAATTATACAGATTGAATAAACATAAGAAGCTGTGTCGTACTGGTAAGCGGGATGAGGAAATTAAATATAAATGTGACTCATGCGAACGCGTCTATAAAAGTAAATTGTCTTTAACATTGCATATAAAAAGTACTCATTATGACTATGGGAGAACGTTTGCATGTTGGTGCGGGAAACAGTTCCGTACCCCAATACACTTGACTCAACACAAGAGCCGTCAACATGGTACCAATGGGAAAAATGATTTATACAAATGTAATTATTGCGAGAAGGTGTTTCATACGAAACCGGCTATAGCTGAGCATATAAAGAGGATGCATTATGATTACGGAAAAATGTTTGAATGTTGGTGCGGGAAACAGTTTCGTACACCGAAGTACTTACGTGAGCATATGAAGCGGCAGCATGATGGCAAAAAGCAAAATTGA
- Protein Sequence
- MTIKTESLEEQDINCDNSGPSTVHYNVPVTTQELKHNLSGRIFKNNLNLLKCNDEHIKIEINTPTDNEFNELDQSQHFEKHYDNYNKMLTHVTDVHSENNHKCEICGIRFNSVPNLKSHIKLLHELKNLPNQVLNNLPNQVFNNLPNQVTPNDMKCIYCNVDFKRKYSLNNHMKLCRIGKEDEESKYKCDSCERVYKNRKSLVKHIKKIHYDYGRMFECWCGKQFPSPIHLTIHKSLRHYTNKKNELYKCKFCEAVYNMKNSLTRHMKRTHYDYGSTFDCWCGKQFRTPQYLREHMRRQHGSEMKDKNNDKVQCDFCQKTFQTKHYLLTHIKSVHYDYGKVFECWCGKQFRTPILLSNHKRRHPNSNINDTNNDKLYRLNKHKKLCRTGKRDEEIKYKCDSCERVYKSKLSLTLHIKSTHYDYGRTFACWCGKQFRTPIHLTQHKSRQHGTNGKNDLYKCNYCEKVFHTKPAIAEHIKRMHYDYGKMFECWCGKQFRTPKYLREHMKRQHDGKKQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317541;
- 90% Identity
- iTF_01317541;
- 80% Identity
- iTF_01317541;