Spav010216.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:1863283-1868476[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.017 22 5.5 0.1 15 29 173 187 166 195 0.80 2 8 5.6e-05 0.072 13.4 1.1 6 43 232 265 227 266 0.82 3 8 0.0018 2.3 8.6 3.3 10 40 274 299 265 301 0.77 4 8 0.0015 1.9 8.8 1.5 14 43 309 335 305 336 0.90 5 8 0.016 21 5.5 5.7 11 43 364 398 356 399 0.76 6 8 0.0027 3.4 8.0 1.4 15 43 459 484 453 485 0.92 7 8 0.35 4.5e+02 1.3 0.1 34 43 504 513 494 514 0.75 8 8 0.017 22 5.4 1.0 13 29 521 537 516 547 0.82
Sequence Information
- Coding Sequence
- ATGGATAGCAAGGAGCACGGAACACCCAGCTGTGAAACATTGAGTACCACGTCTCCAGAGGCAGTGATGAATCTACAGATATCTACACAAACATTTAAAGTAGAAATTAAAGAGGAAACAACAGCAGAGTGCAGAGATGAAACAGAATCACCTTGCAATGACTATATGCATCCATCTAAGCCCTTAGAATCACCAGAGTATGGAAATTACTATGACAGTAAGATTTATATGTGGGAAGAATTAAAGCAGGAATTCCCTGAGGATGACTGCCCTCAATCAGACTGCAGTATGGATGGTAGAATAGTTTCAGAAAATAGGGAATTATTATCACATACAAACAAGCAAAAAGTAGAAATCGAAAACACAGAGGAGGAATTTTCATTAATTTTAAAGGAAGTAGGAGTGAACAGTAAGTGTAAGTACCAGATTACCATAAAAACGGAGAGGCTAGAAGAGCCAGACATTACGGATAGTTCTGGAGCTACTAGTGTTCATTATGATGTCCTAGTAACACCTCAAGAAGTTAAATGCAAGTTCTGTGCTAGAATATTCAATAATAATTACAATTTATTAAAACACAATAATGACCACATAAAAATTGAAATAAACACACCAGCGGATAATGACATTAATGAGTTGCACCAGCGCCAATATTGTGGGAAAGGTTTTATTAACTATGATAATATGCTTGTACACGTCACTGATGTTCATAGCGAGAATAATCCCAAATGTAAAATATGCGGAAAGCAATTTAATAGCGTAATGAATCTTGAACGTCACTTCAAACTTTCACACAAACTTAAGAAGTTCCAAAAACAAGTAACTGCAAAGGATATGAAATGTATATATTGCAATGCAGCTTTCAAACGTAAATCCAGATTGAATAACCATATAAAGCTATGTCGTATTGGTAAGGAGGATGAGGATATGAAATATAAATGTGCCTTATGCGAGGGTATTTATAAAAGTAAACATTATTTAACAAAGCATATAAATAGGATGCATTATGATTACGGGAGAACGTTTGATTGTTGGTGCGGGAAAGAGTATCGTACACCGGAGTACTTACGTGAGCATATGAGGCGGCATGATGGCAAAATGAAAAATAGAAATAACGCCAAAGTTCAATGTGACTATTGCCATAAGTTTTTTAAAACCAAACACTATTTATTAGTGCATATAAAAACTGTTCATGATGATTATTGTAAATTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACTCCGGTATTTTTAAATAACCATAAGAGACGGCACACTGACGGTAACATTAATGATACAAATAATGTCAAATTATGCAGATTGATTAACCATAATATAAAACTATGTCTTACTGATAAGGAGGATGGGGAAATGAAATATAAATGTGAGTTATGCAAGGGTATTTATAAAAGTAAACATTATTTAATATTGCATATGAAGAGGATGCATTATGATTACGGGAGAACGTTTGCATGTTCATGTGGGAAACAGTTTCGTTCACCAGTACAGTTAAGTCAGCACATGTGGCATGTTCATGGTGGCAAAATGAAAGATAAAAATAAAAGCAAAGTTCAGTGTGACACTTGCCAAAAAATTTTCAAATCCAAATACTATTTATTAAAACACAACAAAAATGTTCATTATGATTATGGCAAAGCGTTCGAATGTTGGTGCGGGAAACAGTTCCGAACGCCGAAACTATTAAATGATCATAAAAGACGGCAGCACGATGGCATCTTTAATGATAAAAATAATGACAAATCCCAAAGTGTCTCTAGTTCTTCCACGTGTTGA
- Protein Sequence
- MDSKEHGTPSCETLSTTSPEAVMNLQISTQTFKVEIKEETTAECRDETESPCNDYMHPSKPLESPEYGNYYDSKIYMWEELKQEFPEDDCPQSDCSMDGRIVSENRELLSHTNKQKVEIENTEEEFSLILKEVGVNSKCKYQITIKTERLEEPDITDSSGATSVHYDVLVTPQEVKCKFCARIFNNNYNLLKHNNDHIKIEINTPADNDINELHQRQYCGKGFINYDNMLVHVTDVHSENNPKCKICGKQFNSVMNLERHFKLSHKLKKFQKQVTAKDMKCIYCNAAFKRKSRLNNHIKLCRIGKEDEDMKYKCALCEGIYKSKHYLTKHINRMHYDYGRTFDCWCGKEYRTPEYLREHMRRHDGKMKNRNNAKVQCDYCHKFFKTKHYLLVHIKTVHDDYCKLFECWCGKQFRTPVFLNNHKRRHTDGNINDTNNVKLCRLINHNIKLCLTDKEDGEMKYKCELCKGIYKSKHYLILHMKRMHYDYGRTFACSCGKQFRSPVQLSQHMWHVHGGKMKDKNKSKVQCDTCQKIFKSKYYLLKHNKNVHYDYGKAFECWCGKQFRTPKLLNDHKRRQHDGIFNDKNNDKSQSVSSSSTC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317551;
- 90% Identity
- iTF_01317551;
- 80% Identity
- iTF_01317551;