Sjap002391.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Saturnia japonica
Gene Symbol
-
Assembly
GCA_033032175.1
Location
CM065305.1:1927897-1933131[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.2 22 7.0 3.4 2 22 194 214 193 214 0.95
2 16 3.3 3.6e+02 3.1 1.0 1 23 312 334 312 334 0.82
3 16 0.21 22 6.9 0.6 2 23 469 490 468 490 0.96
4 16 0.0034 0.37 12.6 0.8 2 23 570 591 570 591 0.97
5 16 0.027 3 9.7 1.8 1 23 599 621 599 621 0.98
6 16 0.12 13 7.7 3.4 1 23 658 680 658 680 0.95
7 16 0.00023 0.025 16.2 4.0 1 23 689 711 689 711 0.99
8 16 0.028 3 9.7 3.7 1 23 796 818 796 818 0.99
9 16 0.9 98 4.9 2.0 1 19 875 893 875 897 0.89
10 16 0.95 1e+02 4.8 0.2 1 23 903 925 903 925 0.93
11 16 0.0065 0.71 11.6 1.8 1 23 992 1014 992 1014 0.96
12 16 0.0043 0.47 12.2 1.0 1 23 1020 1042 1020 1042 0.96
13 16 0.0064 0.7 11.7 2.6 1 23 1132 1154 1132 1154 0.97
14 16 0.00016 0.018 16.7 1.4 1 23 1160 1182 1160 1182 0.99
15 16 0.72 79 5.2 2.1 1 23 1274 1296 1274 1296 0.96
16 16 0.0027 0.29 12.9 3.7 1 23 1307 1329 1307 1329 0.98

Sequence Information

Coding Sequence
ATGGGTTTACAGTACGCGGAGAAGGATGTTGTGAGTTGTACTAGTGATTCTAACGATGCCACTGTTTCCGAACCCAATAACTGTCGAAATTCATCACTTAATGAAGATGTACGAAGTCAGTCACCTAATACAAGTACCGATGAAGCTAAatcgcaaaaacaaaaaaggatcCCCAGACCCTTACCCCAACTTATACCATTGAATTCTTCAACGCCAAACCAAAAGCTATCCACAGGCGAACCTCCGCTTAAGAAATTTAAGGAGTCTCCAAATTCGGAAGCTATAGATATAGACTTACAAACTAAGATGGATAATTTACAAAGCGAAGTCTCATTTATACCTTTAAGAAATGGaccattaaatttaaaagacacAATAGTTCGCAAAAAAAATGAATCATTTTTTGACAGATTGAAGGAACGACTATTAACAGAAACGGGTGAAGATGggttattaatttgtaaaaactGCGGCTTTGAAAGCAAATGTTTATCTGAACATTCAGTACATGAGAAAAATTGCGCGCCATTAACGAATCGGAACACGTTAAACACACTGCTTCCAAGTTCCGGCTCAACACGTTGCCAAAATTGTAGACATAGGTGTAAGTCTAGTGCCGatttatacattcatatgcaaaCGTGTAGAAGAAGTGGAAAAGTTGAATGTGAAATATCTGTAGATACGAGAAGGCAAAGTAATGAAGGCGAAGAAATTAATCATGATAAAGAGGTTGAGCCACATCCAATGGAAAACGTAGTTTTCGTGTGGAACAATATTCACCAAGAACAGGGAAAATTCGATACTCCATTAGATATAAGTATAAATGACGATTCAACTCTACCGGACCATACCAGAAGCTACGAATGCGAAACCGTTGATGAAAATGAAAGTATGAATCTGTCACCAAGTCAAGCTGTCGGGAAAAATGTCTTTAAATGCCCCCATTGTCCATTTTGGGCATCTACAGCAAGTCGATTTCACGTTCATATTGTgggtcatttaaataaaaaaccattcGAATGTTCCCTATGTAAATACAAGTCGAACTGGAGATGGGATATCACAAAGCACATTAAACTAAAATCTGCCAGAGACCCTGAGCATAACGATGCCAAAGTTTTAATGACTGATGAGACTGGTAGAAGAAACTATAGCAAGTATAGTAAATTCTTAGCTATGCCTGTTGTAAATGAAAATGGTGAGAGTGAATTTCATTATATAGATCCTAATAAAGCTGTAGATTCATCAATGGACGTCGATGAGACCTTTAGTGATGCCGTAGATGTTACAAATTCCAATTACGAAATGCAACCACTAAACCTTCAaactcaaattgaaaataaatcagATGCAATGGATATTAGAGATCAAGATGgcaaaaaaataaagaagacATTATGGAAATGCAAGAAATGTAATTacaaAGATTCATCTAAGGAAGCGTTGTTAGAACACGTCCGTGAACATGCCAAAATGGATAATGGTCAAGATGATCCAAAGAATCTTAGTAATAAAAAACCTGAAACTGTATTAGATCCAGCTGACTTGGCTTATCGCTGTGGCCATTGCAATCAACTGTCCAATTGGAAGCACGTGATTCAGCGACACTGCCGTCTGAAGCACGAGGgaataataaaagttattactACTGTCAAACCAAAACTAGATATGGCATCCGTATCAGCAATCGAATCATCCGGTGAAACGTGTACAAAATGTCCCTACAGAACAAGCGATAAGAAGGCTCTCTCGATTCATATTCAACAACATCAGCCATCGACAAATTCAATATTCAAGTGCTTCTTCTGTCCTTTCTTTGTTAAGGATGAACATGACCTAATACAACATTTACAAGTCCACGGTGTGAACGATCCAGAGGACTATATATCCAAAGCTGTGAATTGTGTTTCACCAATACCAGAGATACAATCCTCATCAAATCCAATTCACCCGTGTTCAACTAAACGCCACAAGTGCACGGAGTGCCCATATGAGACAAACAGTAAATCTCAGTACATGTACCACGAACAATTTCATAGACTTCCAGCAGACACCGTTCCGTATAAATGTCCCGAATGCAATTACAGTGTATCGAAGAGACATTTACTCCACCAGCATCTGAGGGTGCACGGCATTCTTCCCAGGAAAACCGAATCAGAAGCAGAGTTAGAATCGATGTCATCGTATCAAAAATCAGAAAATGCAACCGAGTTATCCAAGGTTAATCTTGACGAAACACCTTACGTATGGGTTTCTGCGAAAAACGAATtccataaaatgtataaatgccGTTATTGCTCCTATGTTAATTCGCAGAAATGCAAAATACCGAATCATGAAAAGATTCATTTTTACTTATTCGAAAACAGTGATATAATCGTTTATAAATGTTTGGAATGCAAATTCACGTGTGACAATGCCAGTAAGCTGTCTGAACACTCCAAAACTCACGGGGAAATATACGGAAGAATATACTGTCCGGTTGAAGACGATGTTCCCGATGAAGACCAAATATCTAAATTACGTAAAGTAATTGAACTTGAGAAATCTAGCAACGCAGACAATATGTCACCCAGAGACGATGAAACAAAACCTGACAATAGGGAATTGAAAACATTACATTTCTGTCAGCAATGCCCTGCAAGGTACTTTACTGAAAGTGAATTAAAGGTACACGACAAATACCACGATCTTTCATTGGCATATAAATGTAATAGCTGTGAATTTTCCGTTTCCGAAGATGATGAATTGAATTCACATAATGTAGTGCATTCGGATGAATATcatacaaaaactaaaattcttaaatttattcacAACGTACACGTAATGTACAGGGAACCTAGGCTGGAATCGGTTCATTTTCCGGAAACCTCAGAGATCACCTGGATAGCTAAACCTACGAAAATAAGTGAGAATGTTGAAACTGTTGTTAAAAAAACATACGAAGGAAAGCACGCTCCGAAGCAATATTGTTGTAGGGAATGTCCAGCGAAATTCTTTAAAAGTTCTGCTCTTAATTATCACATGGCTTTACATGGTGGAGAAGGCGACCATAAATGCAAAATATGTAGTTACACAGTTAAAAATATCGGGAATCTTGCAAAACATGAACTGTTACACGAAACTGAACATAAACAGGGCAACTGTGATTACGAATCTAACGATgatattgattataaaaatatcccGTTATCAGGAACAGATTTATTTCAAAGGAAAACCGAGGCACAAAAGAGAGTTTTCACTGacaaagataaattagtcaAACCAAATGACCACTTCCCACCAGTTCTCCAAGCAGACCCACAATTTGGTTACTTAATGCACGGCAATCCCGAGTTCATATACCCGACatacttaaaaaatggacgacAAAAAGAAAAACGTTACAAATGCCATAAATGCCCATCTGCGTTTGAGAAAAGAGAgcaatacaaaatacatttatctCTACACGGGTCAAAACAAAGGTACAAGTGTGAACTTTGTGATTATTCCGTAAAATATTACGCGAACTACGTCCAGCACATGCGGAAACACCAGATGAACGACGAGGCACAAGCTGAACGTAAAAAAAGCAATAGTGGGTTAACTGATACCGATTGCCAAGAGGAAGTTAAACGCGAAGAAGGCAATCTCCATATTAAACTCGCTATAAAAACTATGCCAAAGGGAGTCCCCAAGAGTGATTTCCAACAGTTTTCGTTAAGAGACCAACAAACGTTGAGGTTGTTGCAACGGAGACGGTCCATGGCAAACACGGGAACAGATGTCAACAACTCGGAGACATCACCGACAAAAGAACGGAAGCTTCACATGTGTCTATTATGCCCGTACACGAACCAACGGCAAGACGCACTGAATAACCATTACAAGAGGCACGACGATAGCGATTATCTTAACTCTGGTAGCCATAAGTGCTCCTACTGCGATTTAGTCGTAGTCCAATCACATTTTCTAAGAGAACATTTGAAAACACATTTCAATCATCATAAAACACATTTACCTGAATGTTTTGTTGCGAACGAAGAAGTGAGTTTTACCTTAAAACAAGTAGACGACGAAACAAAATGCACAGATCtcaaattagattttttaaataaatataacaagtgCAATGAAGATAagatttatgttaaaattaaaactggaGAATTGTTAGTAGAATAa
Protein Sequence
MGLQYAEKDVVSCTSDSNDATVSEPNNCRNSSLNEDVRSQSPNTSTDEAKSQKQKRIPRPLPQLIPLNSSTPNQKLSTGEPPLKKFKESPNSEAIDIDLQTKMDNLQSEVSFIPLRNGPLNLKDTIVRKKNESFFDRLKERLLTETGEDGLLICKNCGFESKCLSEHSVHEKNCAPLTNRNTLNTLLPSSGSTRCQNCRHRCKSSADLYIHMQTCRRSGKVECEISVDTRRQSNEGEEINHDKEVEPHPMENVVFVWNNIHQEQGKFDTPLDISINDDSTLPDHTRSYECETVDENESMNLSPSQAVGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYSKFLAMPVVNENGESEFHYIDPNKAVDSSMDVDETFSDAVDVTNSNYEMQPLNLQTQIENKSDAMDIRDQDGKKIKKTLWKCKKCNYKDSSKEALLEHVREHAKMDNGQDDPKNLSNKKPETVLDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVKPKLDMASVSAIESSGETCTKCPYRTSDKKALSIHIQQHQPSTNSIFKCFFCPFFVKDEHDLIQHLQVHGVNDPEDYISKAVNCVSPIPEIQSSSNPIHPCSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTVPYKCPECNYSVSKRHLLHQHLRVHGILPRKTESEAELESMSSYQKSENATELSKVNLDETPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHFYLFENSDIIVYKCLECKFTCDNASKLSEHSKTHGEIYGRIYCPVEDDVPDEDQISKLRKVIELEKSSNADNMSPRDDETKPDNRELKTLHFCQQCPARYFTESELKVHDKYHDLSLAYKCNSCEFSVSEDDELNSHNVVHSDEYHTKTKILKFIHNVHVMYREPRLESVHFPETSEITWIAKPTKISENVETVVKKTYEGKHAPKQYCCRECPAKFFKSSALNYHMALHGGEGDHKCKICSYTVKNIGNLAKHELLHETEHKQGNCDYESNDDIDYKNIPLSGTDLFQRKTEAQKRVFTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKSNSGLTDTDCQEEVKREEGNLHIKLAIKTMPKGVPKSDFQQFSLRDQQTLRLLQRRRSMANTGTDVNNSETSPTKERKLHMCLLCPYTNQRQDALNNHYKRHDDSDYLNSGSHKCSYCDLVVVQSHFLREHLKTHFNHHKTHLPECFVANEEVSFTLKQVDDETKCTDLKLDFLNKYNKCNEDKIYVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00114559;
90% Identity
iTF_01317788;
80% Identity
-