Basic Information

Insect: Saturnia japonica
Gene Symbol: -
Assembly: GCA_033032175.1
Location: CM065330.1:8410024-8413295[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00094 0.1 14.3 3.0 1 23 283 305 283 305 0.96

2 11 0.00018 0.019 16.6 1.1 1 23 382 405 382 405 0.97

3 11 0.00086 0.094 14.4 1.1 1 23 409 431 409 431 0.97

4 11 0.0013 0.14 13.9 0.6 2 23 453 475 452 475 0.93

5 11 0.022 2.4 10.0 2.0 1 23 479 502 479 502 0.97

6 11 0.0099 1.1 11.1 0.2 2 23 525 547 524 547 0.93

7 11 1.6e-05 0.0018 19.8 1.5 2 23 558 579 557 580 0.95

8 11 0.003 0.33 12.7 2.5 2 23 596 617 595 617 0.96

9 11 0.017 1.9 10.3 0.8 1 23 623 645 623 645 0.94

10 11 0.6 66 5.5 2.7 1 22 651 672 651 675 0.90

11 11 0.024 2.6 9.9 0.0 2 23 731 752 730 752 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00094	0.1	14.3	3.0	1	23	283	305	283	305	0.96
2	11	0.00018	0.019	16.6	1.1	1	23	382	405	382	405	0.97
3	11	0.00086	0.094	14.4	1.1	1	23	409	431	409	431	0.97
4	11	0.0013	0.14	13.9	0.6	2	23	453	475	452	475	0.93
5	11	0.022	2.4	10.0	2.0	1	23	479	502	479	502	0.97
6	11	0.0099	1.1	11.1	0.2	2	23	525	547	524	547	0.93
7	11	1.6e-05	0.0018	19.8	1.5	2	23	558	579	557	580	0.95
8	11	0.003	0.33	12.7	2.5	2	23	596	617	595	617	0.96
9	11	0.017	1.9	10.3	0.8	1	23	623	645	623	645	0.94
10	11	0.6	66	5.5	2.7	1	22	651	672	651	675	0.90
11	11	0.024	2.6	9.9	0.0	2	23	731	752	730	752	0.97

Sequence Information

Coding Sequence: ATGTCatctgaaaatgttacaaatgTGGCAACTGGATCATCAGAGACAACAAGCGATTATACAGTAAAAGAAGAAATGGAAGAGGAAAATCTAAATATTAAGATGGAAGCAGAGGCACAGTTTGATGCAAGTGATGAGACATCCATAGATGGCGACAATCCATTTGGAAATGTACAATTACATGTCAAACAGgaaataacattgaatattGAGAAGGAGAGTTCTGATTCCCATAGCAGTGATGCTTTTCCAATAAGAATAAGGTCTTTTGAAACAATGAGTAAACCTAGTAGTGAAccagtaggtaatataatttcAGAAACTCCCAGAATGAGTGTAAAGGAAGAAACCATCACCGGTGACCAGTTTGTGCCATATGAATATCCTAATTATGAGGACAGCATGGACAGTAATGAAGCTGTTGCACTGACCAGAGTTGAAGCCTGTTTGCAAGATGATGGGAACATTAAAACAGAAAATTTACagGGACATTCAAAGGGAGATTTTTACAAAGTCATTAAAGATGAGACTGATCTAACAGTTACGGAAACCCATCTTATATCAAATAAACTCATCAATACAACATCTACAATCACAAATCCACGGGATGGTATCATCGAATCACAGACTACGAAGACATTAGTCATGGAAATAAGACCTATGTCAAAAggaagtataaatttaaaaattaccaaTCCAGAAAAAATATTGCCTACAACTGACACCTACATGGACTACGATGATAGTTTCCAATTAAACTCAATAACGGGCAATGTTTTATCCTTAGAGCAAGAGGCTTATGGTCTGTTAAagactaaaacaaaaaaaattctaagtgACAAAGTTCATGCCTGTCCAAAATGCTCAAAtacctatacaaaaaaatacctactaaaAAAGCACTTGTCTGTACATGACTCTATCGAGAAACGAGCCCTGGGTATCATAAAAGGTCAGAAGACGCGGCTGGAGAATCGTACgaaaaaacttaatttagaACAAGATGAGGACAAGAAGCCCAAAGAGGAAGTTGTCCCTTTAAAGAAGGAAGGTTACGAGTGCACTTGTGGAAATGTTTTCCGTCGTAGAAGTCGCATGGAAACTTGTTTGAAGTCACATAATTTGTACGCCGACACAGCTTCGTACCCATGCATGACGTGCTCCAGAAATTTTAAGAGTAAAGAAGAGTTAGCAATGCACCGTAGACGACTTCATAGAAAACGGTTCCCATGCAAATTCTGCCCCACAGACTACAACACTCGCAAGGAACTCTTCAAGCACCTCCAAGCACACCAAAAAGTACAATTAATGGAGTACAAAGTTATCTCGGAAGTTGTAAAAGGGAAGCAGAAGTTAAAGTGTTTTATGTGTTCAAAGACTTACAGTGAATTGTCAGATTTGAAGTCGCACGTGATGGATGACCATAAGGAACCGTATAGTTGTCTATATTGCAAACAGacatttacgaaaataattgaTTTCGGTAATCACACAAAAACGTCCCACCCGGAGGTGGAGGGGCAGTCAGTGTTAGATGTCCTAGAAGCCTTTTCTAAGTTAGTGAAAGCGTGGAAGTGTGAAGAATGCGGACAGCAGTTCCATGAAGCAGATAAACTCGCTCTGCATCAAATAGAAACACATAGCCCGGAACTAAAAGCCGATCCTCAGTTACAATGTCCAGATTGTAGGCGAGTATTCATTAGTCAGAAAGGTCTGACGTCACACAAAAGAGTGCATCACAGTACAGAGAGTGTGGAAGAAGCTCAACCGGTGGAAACGGGGATTATGTGCTTGGAATGCCGGAAAATGTGTAAAGACATGAACTCTTTAACGTCTCACATGCGTTTACACTCACCTGATAGAAAATACCCGTGCAAGTTCTGTGATTTCCGTTTCGCTACACCTgagaaaagaaaaacacatgCCGAATTACACACAGGGGATATGAAGTATGTATGTTTTATATGTGAATACCAGTGCAGTTCAGAGAATCGgttaaaacaacataaaatatcattaaaacatTTGAATATGAAGGAGTTTCTTCTGACAGGCGTTCCATTAGTCGAGGAACAATCAACATCGAAACAGGATACAAAGAAAACGTTGAAAAAAGAAGAGAGAGTCGTTaagaagagaaagagagagagggaTAGGAGAGACAGCACGGCTTCTGCCATGTCAGAAGTGCCCTGTGATATATGCGGTGATAATTTTCCAAGTGAGAGTGAAATGCTAGAACATAAACAGACGCACCCTTTCATAGAGTTCCCTAATGAAGACAAGCCtagtagaatattttttaagtaa
Protein Sequence: MSSENVTNVATGSSETTSDYTVKEEMEEENLNIKMEAEAQFDASDETSIDGDNPFGNVQLHVKQEITLNIEKESSDSHSSDAFPIRIRSFETMSKPSSEPVGNIISETPRMSVKEETITGDQFVPYEYPNYEDSMDSNEAVALTRVEACLQDDGNIKTENLQGHSKGDFYKVIKDETDLTVTETHLISNKLINTTSTITNPRDGIIESQTTKTLVMEIRPMSKGSINLKITNPEKILPTTDTYMDYDDSFQLNSITGNVLSLEQEAYGLLKTKTKKILSDKVHACPKCSNTYTKKYLLKKHLSVHDSIEKRALGIIKGQKTRLENRTKKLNLEQDEDKKPKEEVVPLKKEGYECTCGNVFRRRSRMETCLKSHNLYADTASYPCMTCSRNFKSKEELAMHRRRLHRKRFPCKFCPTDYNTRKELFKHLQAHQKVQLMEYKVISEVVKGKQKLKCFMCSKTYSELSDLKSHVMDDHKEPYSCLYCKQTFTKIIDFGNHTKTSHPEVEGQSVLDVLEAFSKLVKAWKCEECGQQFHEADKLALHQIETHSPELKADPQLQCPDCRRVFISQKGLTSHKRVHHSTESVEEAQPVETGIMCLECRKMCKDMNSLTSHMRLHSPDRKYPCKFCDFRFATPEKRKTHAELHTGDMKYVCFICEYQCSSENRLKQHKISLKHLNMKEFLLTGVPLVEEQSTSKQDTKKTLKKEERVVKKRKRERDRRDSTASAMSEVPCDICGDNFPSESEMLEHKQTHPFIEFPNEDKPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00114401; iTF_00113605; iTF_00112782; iTF_01317652; iTF_01312503;
90% Identity: iTF_01317652;
80% Identity: -