Sjap032999.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Saturnia japonica
Gene Symbol
baz-2
Assembly
GCA_033032175.1
Location
CM065331.1:4740030-4771492[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.7e-11 6.9e-07 30.0 0.0 2 75 638 714 637 716 0.88
2 2 3.3 2.3e+04 -3.7 0.0 5 18 874 887 872 889 0.82

Sequence Information

Coding Sequence
ATGGACAAGGATGGCGCAGACAGCGCCGAGGCGGCAGGGAAGGCGCCGCCTGATGGCTTACTCGATGCCGCTGGTCTTTTCGGTGCGTACTGGGGTAGAGATGGAGCCGCAGCAGGGGGCGCGGCTGCGCAGGCCCAGGCTCAGGCACAAGCCGCCCTCTTCGGTTTCGGGTCACGGTACCCGCCGCCGACGACCCTTGGAGTCGCCGCCAACCAGGCCGCTTCCCTCGGCCTGCATCCCGCTGCAAGTGCAGCGTGGTGGTCGATGGCCTCCCACTTAGCAGCTCAGGACTACCTTGCACGCCTCCAAGCGTCAGGGTTGAATTTTCCACAATTAGGGGATCCTTATGCAGCGCTGTCTGCTTTGTCGGGATCCGGGATGAAGCAGGCCAAGCCTGTGAAACCGCCTAGCCGACATGACAGGTCAGGTCGAAGCAGTACGTCGTCGAGTACATCCACCAAGGATAAGAGCCCTTCGACAAGCAGCAGCGCCTCCCAACAGCAGAATATGAGATCATCATATGGCTTCCCGAAGACTTCGTCACCGTCAACAATGCACTCCCAAGCCTCTTTATCCAGCTTGGCATCGCTAAACAGCTTGGTATCGGCACCGCATCAGTCCAAGTCAGCGCCTAAGCAACCCACTCCGCCAACATCACAAAACAGGAAGTCAAGCGGTTCGTGCTCTTCGAAGGGTAAGGATCGCGAGCTGGCTCTCTTGCGCGGAGACCTTATGCTGGCACAAGCGGCCGCTCATGGGGCTTATCACGCCGCTGTCGCTGCAGCTGCTAAGGGCAAGaaCATGTCTCCTTTATATCCATTCGGGATGCCCGGTTCGGAAAAGGACCGGCACGCAGGCATCGACTCGCTTACCGGTCTGCCTCATACTATACTCAGtGCCGCTTTGGAAGGAGGCGACCCATCATCAGTGCTTGGCGGTGTGAGGTTGCCGCCAGACACCGAAATCATAAAGTATACTTCATCTTTAGCGGGGCCTAAGGCACCGCCAGGGTCAACGAACCGTGGACGCAAGAAGACGATATCACTGGACCCACCACAAGTATCGGTGCATCCGTCCACTGGCGACAGGGGTACGCCGCTGCCGACCAAACGACCGAAAGTGGAAGATTATGGGAACCCGCGGTCTTCCGTTGAAGTGATTCGGTTGCCAAATAAGCCGGACCGGAGCGGACACAATTCCATGTCCGGCACACCGCCACCGAACCTCTCTGACTACGCAGGTATATCCCGTGAGTTACTGCAGACAATAGCGAGCCAAAGCGGCGTGAGCCTTGCCGCTTTGGAAAGACAGCTCGCGGGTTCGACCGTCGGGTCAgAGAGCGGCATGAACCTAAGCGGCAAGTCGATGACGTCACTCGGTGAAGACAGCCCGCTGGATCTGGGCGTGAAGTCCGCGATGGATGAAGACACACCTCTCAACCTATCCCTCAAGCCTACACCACCGAGCACACAAGCCTCAGACGCGTTATCTCGACTTACGTCATTGAGCAGTTCCCTTAGCGCTTCCTCCAATAACGACAGGATATCTCGTCGTAAACCGGGAGCGAAGCCTCGTCGGGTGGTCCCAGAGCTTAACTGCCAGGTGGCAGACTCGCCACGCCCCAAGTCCAGTGGAAGTGAAGATAGTGAATCTGTACCCGGTTGGCCGTCACGTGAAGCGCGTCCGCGGAACCTCGGTCGTGGAGTCAGCAAACCTAAGAAGAACACGGTCGCATCGCTATTGGCGCAGAGCCGGGCTCTTGGACTACGACCGGCGTTGGCTCAACAATTACTCGGTGAAACAGATTTGGAGAAGCTCCGAGCGCTGCTTGGAGAGTCAGCCAGCACGGACTCTGAGTGCGTGTCGGACAGCTGCCCGTCTGACTCGGACGCGAGCGATACGCCGCGGAGGCACAACGACGCACAGTTACGCCTGCCGCTTGCACTAGGTTGGAAGCGTGTAACTGTCATAAAAGGTCTATCCCGTAACTGCAGTATCAAAGGCGACGTGACCTATAATCCACCCGAACCACATTCCTCGATCAAAGTCAAATCTGCGCAGGAGTTGCACGCGttccTGGAATCGAACCCGTGCCCTCCGCTGTGCAGCGACAACTTCAGCTTCAGCGCGCGCACCGTACTCGGCGAGTATGTACAGCCGTGCGCAGCTGACATAGCCGATCCGCTCGTTTTCAACGAAACCGAGATTACTAAACGGTTGGAAGAAGCTCGGGCACAGGCCGCAGCGTCAGGTCCAAGACCAACACCACCACCGCTTGATCGGCGTATGGAGTTGGCCCGTCTCCAGCAAGCTGCAAGAGACGCCAGGAGAGACGCCACGCACCGCTCTAGGGACCAGGCTCGTCTAGTCAGAGAGTTTGAAAAGTCCGAGAAAGCCGAACTAGCTAAGAGGGAgaaagaggctaggagccagcaACTATTAGAGCATATCAACAAGAACCGAACGCAACTGACAATAGAGCCTCTGCCAACGGTGCCCAAGAGTGAGGAATGGAAAATTCCTGAAATCGTTATGGGACCAGCGTTAAAAACTCAAAAAGACAGAGCGATGCCACCTATTAGTTTGTCACTCATACCGGTGAACGGACCGAAGGACCAATCACCCATAAAGAATATTCTCGAACAGTCATGGAAAAACGACGTAGAGGAATACAACGCCCTAGATAAAATGAAAGATTTTGCCGAGAAAGCCGCTTTCGATCTCCCTAAACGTAGAGATAAATACGATTTCAGTCTCATGAAAGCTGTAGAGAAGAAAATTAAAGCTCCCGACAAAGAAAACAATCTAGAGAAATTAATCGAATCTTATTCGAGAATATCTGAATTCATAAACGGCTGTGATTGGTCGAAATTGGAGGCAGATAAAAAGACTGAAGACACTGACGCGTTAGAACAGAAATATTTGGACGCAAAGAACGAATTTATGTCTCAGAATCTTAGTTTGATGCCTAAAGATAACCCTAAATCTATTTTAAAGGAAGTTATAGATTTAAGTGAGGACGATGATAACATACTTGCCGATATTATGacgaagaaaattaataaagggACATTCAATATCGGAAAAGATGGGCTCTGTCCATTTCAGTACATCCATACAGCAACGATGGTTACGGAGTGGTACGttttaaaaaaacactaa
Protein Sequence
MDKDGADSAEAAGKAPPDGLLDAAGLFGAYWGRDGAAAGGAAAQAQAQAQAALFGFGSRYPPPTTLGVAANQAASLGLHPAASAAWWSMASHLAAQDYLARLQASGLNFPQLGDPYAALSALSGSGMKQAKPVKPPSRHDRSGRSSTSSSTSTKDKSPSTSSSASQQQNMRSSYGFPKTSSPSTMHSQASLSSLASLNSLVSAPHQSKSAPKQPTPPTSQNRKSSGSCSSKGKDRELALLRGDLMLAQAAAHGAYHAAVAAAAKGKNMSPLYPFGMPGSEKDRHAGIDSLTGLPHTILSAALEGGDPSSVLGGVRLPPDTEIIKYTSSLAGPKAPPGSTNRGRKKTISLDPPQVSVHPSTGDRGTPLPTKRPKVEDYGNPRSSVEVIRLPNKPDRSGHNSMSGTPPPNLSDYAGISRELLQTIASQSGVSLAALERQLAGSTVGSESGMNLSGKSMTSLGEDSPLDLGVKSAMDEDTPLNLSLKPTPPSTQASDALSRLTSLSSSLSASSNNDRISRRKPGAKPRRVVPELNCQVADSPRPKSSGSEDSESVPGWPSREARPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAQQLLGETDLEKLRALLGESASTDSECVSDSCPSDSDASDTPRRHNDAQLRLPLALGWKRVTVIKGLSRNCSIKGDVTYNPPEPHSSIKVKSAQELHAFLESNPCPPLCSDNFSFSARTVLGEYVQPCAADIADPLVFNETEITKRLEEARAQAAASGPRPTPPPLDRRMELARLQQAARDARRDATHRSRDQARLVREFEKSEKAELAKREKEARSQQLLEHINKNRTQLTIEPLPTVPKSEEWKIPEIVMGPALKTQKDRAMPPISLSLIPVNGPKDQSPIKNILEQSWKNDVEEYNALDKMKDFAEKAAFDLPKRRDKYDFSLMKAVEKKIKAPDKENNLEKLIESYSRISEFINGCDWSKLEADKKTEDTDALEQKYLDAKNEFMSQNLSLMPKDNPKSILKEVIDLSEDDDNILADIMTKKINKGTFNIGKDGLCPFQYIHTATMVTEWYVLKKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01415864;
90% Identity
iTF_01317316;
80% Identity
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