Sjap024030.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- sip1
- Assembly
- GCA_033032175.1
- Location
- CM065322.1:11931772-11943453[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-58 2.6e-54 185.9 2.1 6 275 371 622 366 622 0.96 2 2 0.52 1.1e+04 -3.1 0.0 75 104 636 667 627 684 0.54
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAGGTTATACGATTTGAAATCACCGATTATGATTTAGACAATGAATTTAATCCAAATAGAAATAGGAGGGCTAAAAAGGAGCAACAAATATATGGTGTATGGGCTAAAGACAGTGATGAAGATGACAATGAAGATAATATTCGTCAAAGAACACGTAAACCTAAGGATTACTCAGCTCCTATTGGTTTTGTGGCTGGTGGAGTACAACAGGCTGGCAAAAAGAAAGATGAGAAAAAGGAATTAGAATCATCAGCGCCAACAACATCACGGCCAAAGTTTACACAAGACAGTTCAGATGAGGAAGAATTAAACAATCCTGATGAGAATGAGACAGCAGGGATTAGAAGACAAGGACAGGGTATGAGAGCTGCTAATCTCGGAGGTAATGTGGGAACATGGGAGAGACACACAAAAGGAATTGGTGCTAAgttgttattacagaTGGGCTACAAACCAGGCATGGGCCTCGGAAAGGACCTTCAAGGTATATCAGCTCCAGTTGAGGCTACAGTTAGAAGAGGGAGAGGTGCAATTGGAGCTTATGGTCCTGAGAAAGCTACTataaaagcgAAAAAGGAAGAGGAACGCCGGCTAAAAGAGAAAGAAGACCAAGAAAAAGGCAAAACTGAGAAGATATATAATTGGAAGAAATCACATAAAGGACGTTATTTCTACAGAGATGCCGCCGACGTTATACAAGAGGGTAAACCTACGATCCATACTATTACCAGCAATGAATTGTCCCGCGTGCCCGTTATCGATATGACGGGTAAGGAGAAGCGGGTTCTGAGTGGGTATCACGCGCTGCGTGCCCACGCGCCTCGATTTGAGCATGAACCTCGACGGAAGTGCGATAATTTCTCCGCGCCGCAATTGGTGCACAACTTGGAAATCATGGTGGAGTGCTGTGAACAGGATATAATTCAAAATGCACGAGAACTGCAACAAGCTgaagatgagattgtggtccTCGAAAGGGACCTGGAAGATTGTAATATCAAATTACAAGAGCATGACCAGGTCATCTACAAAGTGGACGCCATATTGCAAAAAGTCGAGGAGCTGAACAAATGTGATGTTTCACTAGAGACTGCATATgaagttttatttgatttaaagGAATCTTACCCATTAGAGTATGAGATGTTTGGTTTGGGGTCTATAGCTGGTAATATCGTGAGTCCACTGCTAAGCGCTTTACTGGCCACGTGGGATCCGTTGCAAGCGCCCGAGGATCCTGTACCTATGTTCCTGAAGTGGAAAAATCTCCTTACTGAGGAGTCATACCACTGTTTACTATGGCAAAATTACGTAACGAATATTAGCCAAGCTGCTGAATCGTGGAACCCGCGGGCTCCGGATGCAATGGTACGAGCTTTCAGCGCGTGGTCGGAGGCCTGCCCGACATGGATGGTGACGTCATGCGCTGCGCGGTATGTGGTCCCTCGGGTACTGGAAGCAGTGCGCGTGTGGGACCCCACGGGGGATACGCAACCGTTGCACCAGTGGGTCCTACCCTGGCACGAACTGGCCGGGTCTGCGCTAGCGACGGCGGTTTACCCGTTGATCAGGTCACGGCTGGCGACCGCGCTGGCGGGCTGGCACCCGGCTGACGGGTCAGCGCGAGGTGTTTTAGGCGCGTGGAAAGACGCCTGGGCGGGCGCGCTCACCGCGATGCTTCACCAGCACGTCGTGCCCAAGTTAGAGCACTGCCTTCAGCACGCGCCTCTCGACCTCGTCGGCGGCGAGAATACGGCGTGGCAGTGGTGCGTCGAGTGGGTGGACTTACTCGGTGCGCCTACAGTGGCTGCGATCGCGAACCGCGCTCTGCTCCCACGCTGGTTAGCAGCTCTAGCCGCATGGTTGAACACCAATCCCGCTCATGCCACTGTCCTCAACTCTTACACTGATTTCAAGAGAATGTTCCCTGAAGAAGTGCTCAAAGAGCCAGCAGTCCGCGATGCGTTCCGCAAAGCATTGGACATGATGAACCGGAGTACAGACATCGATTCTATTGAGCCGCCGCCCCCGCCGCGATTCACGCTCTCTGACCTGAAGGAAACTTCTAGAATCAACGATATACTAGCGACAGCGAACCAGCAGAAGAGTTTCTCTGAACTCTTGGAGTCTAGGTGTGTGGACAGGGGCATCACGTTCGTGCCCATCGCTGGGAAGACGAGGGAGGGCCGGCCGTTGTACAAGATCGGTAATATGCAATGTTACGTTATAAGGAACGTGATTATGTTCTCCAATGATGGCGGAAGGAATTTCGCTCCTATCAGTATGGaaaagttgttaaaaattgtcgaggattga
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEQQIYGVWAKDSDEDDNEDNIRQRTRKPKDYSAPIGFVAGGVQQAGKKKDEKKELESSAPTTSRPKFTQDSSDEEELNNPDENETAGIRRQGQGMRAANLGGNVGTWERHTKGIGAKLLLQMGYKPGMGLGKDLQGISAPVEATVRRGRGAIGAYGPEKATIKAKKEEERRLKEKEDQEKGKTEKIYNWKKSHKGRYFYRDAADVIQEGKPTIHTITSNELSRVPVIDMTGKEKRVLSGYHALRAHAPRFEHEPRRKCDNFSAPQLVHNLEIMVECCEQDIIQNARELQQAEDEIVVLERDLEDCNIKLQEHDQVIYKVDAILQKVEELNKCDVSLETAYEVLFDLKESYPLEYEMFGLGSIAGNIVSPLLSALLATWDPLQAPEDPVPMFLKWKNLLTEESYHCLLWQNYVTNISQAAESWNPRAPDAMVRAFSAWSEACPTWMVTSCAARYVVPRVLEAVRVWDPTGDTQPLHQWVLPWHELAGSALATAVYPLIRSRLATALAGWHPADGSARGVLGAWKDAWAGALTAMLHQHVVPKLEHCLQHAPLDLVGGENTAWQWCVEWVDLLGAPTVAAIANRALLPRWLAALAAWLNTNPAHATVLNSYTDFKRMFPEEVLKEPAVRDAFRKALDMMNRSTDIDSIEPPPPPRFTLSDLKETSRINDILATANQQKSFSELLESRCVDRGITFVPIAGKTREGRPLYKIGNMQCYVIRNVIMFSNDGGRNFAPISMEKLLKIVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00450133;
- 90% Identity
- iTF_00114117;
- 80% Identity
- -