Sjap011561.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- -
- Assembly
- GCA_033032175.1
- Location
- CM065311.1:19226398-19227346[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 5.9e-06 27.1 0.0 1 36 8 43 8 48 0.95
Sequence Information
- Coding Sequence
- ATGAAGTCAAGAAAAAAGTACACGGAAGAGGATCTTCAAAATGCTATTACAGCAATTAGTAATGGCAGTAGTGTTTACAAAGTTTCTCGACAGTACAATATTCCAGAAACGACATTGCGGGACAAACGTGACAAATATATTGTCGCGATATACCCGGCAGAAAAACGAAAAACGGTACTCTCAAAATCGGAAGAAACGAAAATTGTTGACTGGATCCATTATCTAGGAAAACACGGTTTCCCAGTTTCTAAGGAGCAATTGAAGCAAGGAGTGGCAAAGCTGGTTGAAAATTTAAACCGACCAAACACTTTTAAAGATggcatccctggtaaacattgGCTTACTAATTTCTTATCAAGACACCCAACAGTTGCAAAGAGAGTAGCACAAACTTTGCCAACTCATCGAAACAAAATAACTGAACAAGATGTGCGCAATTGGTTTGGTAGAGTCAAAAGttattttgaaacaaataatttattaagtgtACTTGCAGATGAGTCAAGAGTTTATAACTGCGACGAAACTGCCTTTTTTCTCTGTCCCAAAGAAAAAGACGTCTTAGTAAAAAAAGGTAGCAAGCGTGTGTATAACAGAGTTGCTAACGACGAAAAAGAATGCTTAACTGTCTTAGTTAACGTTTCAGCTGGTGGCAAAATTGCTCCACCTATGGTATTATATCCATACAAACGCTTGCCAAAAAACTTGCCTTTGACGGTGCCACCTACTTGGGGTATAGGATGCACAGAATCAGGGTGGATGAATATGGAGGCCTTTTTATGA
- Protein Sequence
- MKSRKKYTEEDLQNAITAISNGSSVYKVSRQYNIPETTLRDKRDKYIVAIYPAEKRKTVLSKSEETKIVDWIHYLGKHGFPVSKEQLKQGVAKLVENLNRPNTFKDGIPGKHWLTNFLSRHPTVAKRVAQTLPTHRNKITEQDVRNWFGRVKSYFETNNLLSVLADESRVYNCDETAFFLCPKEKDVLVKKGSKRVYNRVANDEKECLTVLVNVSAGGKIAPPMVLYPYKRLPKNLPLTVPPTWGIGCTESGWMNMEAFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264474;
- 90% Identity
- iTF_01316271; iTF_01316275; iTF_01192626; iTF_01020202; iTF_01316277; iTF_01264474; iTF_00794461;
- 80% Identity
- -