Basic Information

Insect: Sarcophaga subvicina
Gene Symbol: Zfy1
Assembly: GCA_936440885.2
Location: CAKZFJ020000532.1:653233-658492[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.023 2e+02 3.1 0.0 26 51 232 257 220 260 0.89

2 12 1.3 1.1e+04 -2.5 0.0 30 45 263 278 261 285 0.80

3 12 0.011 99 4.1 0.1 26 50 287 311 267 315 0.87

4 12 0.1 8.7e+02 1.1 0.1 21 49 343 371 332 374 0.80

5 12 0.98 8.5e+03 -2.1 0.0 26 43 407 424 403 429 0.80

6 12 0.00035 3.1 8.9 0.1 21 48 429 456 424 459 0.92

7 12 0.005 44 5.2 0.0 27 46 464 483 459 485 0.89

8 12 3.3 2.8e+04 -3.8 0.0 17 26 499 508 493 509 0.65

9 12 0.00041 3.6 8.7 0.1 18 44 549 575 543 584 0.88

10 12 0.026 2.3e+02 2.9 0.0 26 45 584 603 576 609 0.85

11 12 0.002 18 6.5 0.0 22 46 609 633 605 637 0.87

12 12 0.33 2.9e+03 -0.6 0.1 26 48 641 663 634 664 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.023	2e+02	3.1	0.0	26	51	232	257	220	260	0.89
2	12	1.3	1.1e+04	-2.5	0.0	30	45	263	278	261	285	0.80
3	12	0.011	99	4.1	0.1	26	50	287	311	267	315	0.87
4	12	0.1	8.7e+02	1.1	0.1	21	49	343	371	332	374	0.80
5	12	0.98	8.5e+03	-2.1	0.0	26	43	407	424	403	429	0.80
6	12	0.00035	3.1	8.9	0.1	21	48	429	456	424	459	0.92
7	12	0.005	44	5.2	0.0	27	46	464	483	459	485	0.89
8	12	3.3	2.8e+04	-3.8	0.0	17	26	499	508	493	509	0.65
9	12	0.00041	3.6	8.7	0.1	18	44	549	575	543	584	0.88
10	12	0.026	2.3e+02	2.9	0.0	26	45	584	603	576	609	0.85
11	12	0.002	18	6.5	0.0	22	46	609	633	605	637	0.87
12	12	0.33	2.9e+03	-0.6	0.1	26	48	641	663	634	664	0.85

Sequence Information

Coding Sequence: atgatTTGTCGACTATGTTTAAAGGATATTCCAAAGGAATTCAGTATAAAGTTATATGAAAATGTAGATTCAACAACCGAAGCAATGGAAATGATTAAACTGATTGAAAAGTATTTGGAAATCGAAATAAAACATAACGATGTTGTGTCGACAATTATCTGCCAGGATTGTTCTGATCACTTGGAGGAGTTCCATAAATTTTCACAACAAGTTGCCGAAAAACAACTAACGCTACGTAATGAATTTCTAGatgtaaatcttaaaaaagaatttaattttgatgagGATAATGATGTCTGGGATAGTGATGATCccgagaataaaataaatgtacatatacaaGATAATACCCAAGAAATAACTGTCACATGTCCAATAGATACTTTCAAAGATGAAAGCAAtaatgatgaagatgatgaacaAGAAATGCCTACTGAGGATTTACTCGATACGAGTATAGACAATGATGAGAAGGATATAATTGCACCAGATAGTGTAGCTATGAATGAGCTCAACAGTCAGCATTCATCTGATGACGATGTGCCactaataaaattgaaatcagtTAGAAAGacttctcaaaaaaagaaacgcAAAAAATTAACTATTAAGCCTGGTTTGGatcgtaaagaaaaaaaaccaattcagaaaaagttatcAGCGCAGAAAGAAGTTGCCATGCTAATGGACTTAATATGCGATATTTGTCAAGCCAAAGTTGACACATGGAAAGCCTTAAGGGAACATTTCTTATTTGCCCATACCAAAACACCCTACATTAAATGCTGTGATATTATTTACCGTAAACCACGAGCACTTGCCGATCATCTTCAATGGCATAAAAATCCAGAAATGTTCAAatgtcaaatttgtaatcaaaataTGTCCAGTGCACGAAATTTAACCACACATATAACAACGGAACATCCAGATAAGGCGGATATAATTGAGTTTTATGAATGTGAACATTGTTCAAAACGTGTGCGAAATTATAACttatttaaaaagcatttaCGTTCCCACAACAAGGAGAAGGAAGTTGAATGCCATATTTGCAATAAAAGATATGCATCAGAGTACCATTTACAACGTCATATCGATACGTTTCATAAgggaaaaacatttcatgtctGTGACATTTGTGGTCGTAAATACAAATGTAAAGATTCATTTAAGAAACATTGTGACGAACATAAGGGCATTGTTGATCCGGCTGTTCAATGTTCAATATGTAACAAATGGCTAAAGAATCTTAACAGCTTACGTATACACCGTTTCGTACATGAGGAACATCCGAACCACTGTGGTATATGTGGAAAAAGCTTCAAAACAAAACGTAGCTTAAATAGACACACAGAATACTGGCATAAACTTGATATGAATTTACATTGTAATTTTTGCGAAAAAGTATTTCGTGAAAAACGCAACCTAGACGAGCATATGGCTATGCATACTGGCACTCAACTATATAATTGTCCACATTGTGGCAAAGAGTCACGTTCAagatcaaatatATGTGCAACAATATATCGTTTGCGTAATCATATTGCGTCCGTGCACAATAATATATACCACCATATTTGTGATATTTGTGGgaagaaatttaaatcaaaGACATCATTTCAAAAGCACTATGACGAACACCGGGGTATCGTTGAACCACCAGCTCAGTGTACAATATGCGGGGCATGGCTAAAGAATCAACACAGTCTACGAGTTCATCATCAAACGCATGAGGACACACAATTTGCGTGTGATATTTGcggtaaatttttcaaaactaaaaagaatttaagTCGGCACAAAGGCTATTGGCATCGAAGAGAGCGAAATCTTTCATGTAGTTATTGTGATAAAGTATTTCGTGAAAAACGTAACCTCGATGAACACATGGCCATGCATACAGATACAAATTTATATACGTGCCCACACTGTGGTAAAGAATCAAGATCAAAatcaaatatgtacgtacatataaaaAGGCAGCATCCTGACGAATGGTGGAAATCAAAACAGGAACGCTATAAAATAAAACCCGAAGATGGAGTCGATGAAAGTGAACTGAAAGGAAAGACTCTTGTAAATAATACTCCCCCAAAGGAGTCACAACAGTCCTCAATACCAGAATAA
Protein Sequence: MICRLCLKDIPKEFSIKLYENVDSTTEAMEMIKLIEKYLEIEIKHNDVVSTIICQDCSDHLEEFHKFSQQVAEKQLTLRNEFLDVNLKKEFNFDEDNDVWDSDDPENKINVHIQDNTQEITVTCPIDTFKDESNNDEDDEQEMPTEDLLDTSIDNDEKDIIAPDSVAMNELNSQHSSDDDVPLIKLKSVRKTSQKKKRKKLTIKPGLDRKEKKPIQKKLSAQKEVAMLMDLICDICQAKVDTWKALREHFLFAHTKTPYIKCCDIIYRKPRALADHLQWHKNPEMFKCQICNQNMSSARNLTTHITTEHPDKADIIEFYECEHCSKRVRNYNLFKKHLRSHNKEKEVECHICNKRYASEYHLQRHIDTFHKGKTFHVCDICGRKYKCKDSFKKHCDEHKGIVDPAVQCSICNKWLKNLNSLRIHRFVHEEHPNHCGICGKSFKTKRSLNRHTEYWHKLDMNLHCNFCEKVFREKRNLDEHMAMHTGTQLYNCPHCGKESRSRSNICATIYRLRNHIASVHNNIYHHICDICGKKFKSKTSFQKHYDEHRGIVEPPAQCTICGAWLKNQHSLRVHHQTHEDTQFACDICGKFFKTKKNLSRHKGYWHRRERNLSCSYCDKVFREKRNLDEHMAMHTDTNLYTCPHCGKESRSKSNMYVHIKRQHPDEWWKSKQERYKIKPEDGVDESELKGKTLVNNTPPKESQQSSIPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01314847;
90% Identity: iTF_01314017;
80% Identity: iTF_01315695;