Basic Information

Insect: Sarcophaga subvicina
Gene Symbol: -
Assembly: GCA_936440885.2
Location: CAKZFJ020000036.1:931616-935295[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 1.2e+02 4.4 1.3 5 23 210 229 209 229 0.92

2 16 0.089 9.2 7.8 5.0 1 23 252 275 252 275 0.93

3 16 0.19 20 6.8 0.6 2 23 297 319 296 319 0.96

4 16 1 1e+02 4.5 4.1 2 23 327 349 326 349 0.95

5 16 0.00012 0.013 16.9 1.0 2 23 458 480 457 480 0.97

6 16 0.19 20 6.8 0.6 2 23 503 525 502 525 0.96

7 16 1.1 1.2e+02 4.4 4.1 2 23 533 555 532 555 0.94

8 16 3.2e-05 0.0034 18.7 0.6 2 23 664 686 663 686 0.97

9 16 0.19 20 6.8 0.6 2 23 709 731 708 731 0.96

10 16 0.00057 0.059 14.8 2.1 2 23 870 892 870 892 0.97

11 16 1e-05 0.0011 20.2 2.2 3 23 901 922 900 922 0.97

12 16 1.1 1.1e+02 4.4 3.0 1 23 944 966 944 967 0.95

13 16 3.9e-05 0.004 18.4 1.1 1 23 973 995 973 995 0.96

14 16 0.0011 0.11 13.9 5.2 1 23 1001 1023 1001 1023 0.99

15 16 1.3e-08 1.3e-06 29.4 2.4 1 23 1029 1051 1029 1051 0.99

16 16 0.00015 0.016 16.5 0.5 2 21 1058 1077 1057 1081 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	1.2e+02	4.4	1.3	5	23	210	229	209	229	0.92
2	16	0.089	9.2	7.8	5.0	1	23	252	275	252	275	0.93
3	16	0.19	20	6.8	0.6	2	23	297	319	296	319	0.96
4	16	1	1e+02	4.5	4.1	2	23	327	349	326	349	0.95
5	16	0.00012	0.013	16.9	1.0	2	23	458	480	457	480	0.97
6	16	0.19	20	6.8	0.6	2	23	503	525	502	525	0.96
7	16	1.1	1.2e+02	4.4	4.1	2	23	533	555	532	555	0.94
8	16	3.2e-05	0.0034	18.7	0.6	2	23	664	686	663	686	0.97
9	16	0.19	20	6.8	0.6	2	23	709	731	708	731	0.96
10	16	0.00057	0.059	14.8	2.1	2	23	870	892	870	892	0.97
11	16	1e-05	0.0011	20.2	2.2	3	23	901	922	900	922	0.97
12	16	1.1	1.1e+02	4.4	3.0	1	23	944	966	944	967	0.95
13	16	3.9e-05	0.004	18.4	1.1	1	23	973	995	973	995	0.96
14	16	0.0011	0.11	13.9	5.2	1	23	1001	1023	1001	1023	0.99
15	16	1.3e-08	1.3e-06	29.4	2.4	1	23	1029	1051	1029	1051	0.99
16	16	0.00015	0.016	16.5	0.5	2	21	1058	1077	1057	1081	0.89

Sequence Information

Coding Sequence: ATGGATGAGCAGAGAATACAAAAGTGCAGGACATGTCTTAAGGATAGTACGAAAACATTTCCTCTAACAAAACCAGTGCGGGGATGCACAACAAATGCGACATACGGGCAATTCCTAAAGGAATATGCACAAATTGAGtatAACGCCGATTATGAATACCACATGCctcaatatttgtgttttttatgctGTCGccagttaaaaaatatatatgttttcaTACGTCAAGCCCAGAATTGTAACCTAAAGCTTATTAATGTAATAACTAAACAAATTGATTGCCTGCGGGAACAGGCAATAGATTTACCTCAAATGCAGGAACAAacatcaatttctattaaaaaggaaaatataaacaatattgcTGTCCTAGAAGATCGAGATTATCAAGATTTTATTGCTACAGATGAAGAAAATTCGAAAGCCAATATAACATTAATAGGAGATCTAATTACCGAGAAAGTAGAACAGGCAAAACATGATATTGAAGATAATTTGGAAGAGGATAATAACAACTTTAATAttgaaacaaatcaaaatattacaGTATCGACTAGTACAGAAGTATCCACGATATTGAATAAATTTGACATTCCGCAAAGTACTGAATCTCTTCTGGATGAAGTgcaatgtaataaattaataactaaGCATGACAATTTAATAAATCACATGCACATTTATCATGACGTTACTAACATAGCACCATCTAAACTTTCACAAAGACTAAATCCATCGTTAAAAAACCAAACATTTGCATGCAAAAAATGTCCCTGTAAATACAgtaataaatacaagtatttgaaTCATGTTAAAGATAAACACGGCAGCAAAGAAGTTACAAATGCTATGGGTAACAACATAGAAAAGCCAAAGAATAAAGTTATTAAATGTCAGTCATGTGATTATACAGCGAAAAGCTATGCAGCTTTAAACTATCACAATCGTTCTAAACATGGCACTGAGTCTGATAAATTAAAGTGCAAATTTTGTTCATACACTAGTTTTAAGAAATGCAACCTATTGGTACATGTTAAAAATGTACACAAGGAACTTATAAAAACTCTAAAGGCTGATACGAAAAGCAAAACGGATGAAAgcaTTTCATCAAGTAATAATCTAACTAATGATAATTGCACATCAAGCGATTTTTTAACAACACCCTTAGATGAAGAGAATTCTTTAAATCATGTAGAATACTCTAGCGAAGATGAGATACCACTGGCACATACGATGACCCAATCAAGTtcaaaacattcatcagaagtagaacaagaaaaagaagaattcaGTGATGAAGAtttcataagaaatattttaaatattaaaaaaagaccGCGTAAAAATTTGTCAAACAAATCTTTAGCCAAACGTTGTAACGAATGCGGTAATATATACAAAAACTACAAGTCATTACGAGCTCATCAACGCAGCGTACACATTAGCAGCAAAGAAGTTACAAATGCTATGGATAACAACATAGAAAAGCCAAAGAATAAAGTTATTAAATGCCAGTCATGTGATTATACAGCGAAAAGCTATGCAGCTTTAAACTATCACAATCGTTCTAAACATGGTACTGAGTCTGATAAATTAAAGTGCAAATTTTGTTCATACACCAGTTTTAAGAAATGCAACCTATTGGTACATGTTAAATATGTACACGAGGAACTTATAAAAACTCTTAAGGCTGATACGAAAAGCAAAACAGATGAAAGcaTTTCATCAAGTAATAATCTAAATAGTGATAATTGCACATCAAGCGATTTTTTAACAACACCCTTAGATGGAGAGAAGTCTTTAAATCATGTAGAATACTCTAGCGAAGATGAGATACCACTGGCACATACGATGACCCAATCAAGTtcaaaacattcatcagaagtagaacaagaaaaagaagagtTCAGTGATGAAGAtttcataagaaatattttaaatattaaacaaagaccGCGTAAAAATTTGTCAACCAAATCTGTAGCCAAACGTTGTAATGAATGCGGTATTATATACAAAAACTACAAGTCATTACGAGCTCATCAACGCAGCGTACACATTAGCAGCAAAGAAGTTACAAATGCTATGGATAACAACATAGAAAAGCCAAAGAATAAAGTTATTAAATGCCAGTCATGTGATTATACAGCGAAAAGCTATGCAGCTTTAAACTATCACAATCGTTCTAAACATGGTACTGAGTCTGATAAATTAAAGTGCAAATTTTGTTCATACACTAGTCTTAAGAAATGCAACCTATTGGTACATGTTAAAAATGTACACAAGGAACTTATAAAAACTCTTAAGGCTGATACGAAAAGCAAAACGGATGAAAgCATTTcatcaaataataatttaaataatgataattGCACATCAAGCGGTTTTTTAACAATACCCTTAGATGAAGAGAATTCTTTAAATCATGTAGAATACTCTAGCGAAGATGACATTCCACTGGCACATACGATGACCCAATCAAGTTCAAAATATTCGTCAGAAGTagaacaagaaaaagaagaattcaGTGATGAAGAtttcataagaaatattttaaatattaaaaaaagatcgCGTAAAATTTTATCAACCAAATCGTTAGCCAGACGTTGTAACGAATGCGGTAATATATACAAGAACTACAAGTCATTATGTGCCCATCAACGCAGCGTGCACATTAGCGAAGATAAGTTTAGCTTATGCCCGCATTGTGGTAAAAAGTACAAACGGAAAACTGATCTGAGAATTCATATCGAAAAGACACATGCTGCCACAAAAGATGCAGAATCTGCTAAGAAACCAACAATAcctaaaacaagagaaaaacgtTTTATGTGTACAGAATGTTCGTACGTGTGTGCGACAAtaactattttaaatattcacagAAATCGCCATCATACTGGTGAAAAACCCCATAAGTGTGATATATGCAATAAATCATTTATAGTGCCATATGATTTAAGGATTCATCGTTATTTGCATACCGGCGAAAAACCTTACAAATGTCCCGTTTGTTGTAAAGGTTTCCGTGATAATTCCCACATGCTTAAGCACAAACGCATACACAGCAACGAAAGACCATACAAATGCAATGACTGCGGCAAAAGTTTTACACAATCCTATAATTTGTCGGTACATAAGAGAACACACCTTAAAGAGAAAAAGTTAAATTGTTCAATATGCgataaattctttgaaaataaatcaatgcTGAATATACATCGCATAAATGAAAATCACCATGATGAAGTTCTATAG
Protein Sequence: MDEQRIQKCRTCLKDSTKTFPLTKPVRGCTTNATYGQFLKEYAQIEYNADYEYHMPQYLCFLCCRQLKNIYVFIRQAQNCNLKLINVITKQIDCLREQAIDLPQMQEQTSISIKKENINNIAVLEDRDYQDFIATDEENSKANITLIGDLITEKVEQAKHDIEDNLEEDNNNFNIETNQNITVSTSTEVSTILNKFDIPQSTESLLDEVQCNKLITKHDNLINHMHIYHDVTNIAPSKLSQRLNPSLKNQTFACKKCPCKYSNKYKYLNHVKDKHGSKEVTNAMGNNIEKPKNKVIKCQSCDYTAKSYAALNYHNRSKHGTESDKLKCKFCSYTSFKKCNLLVHVKNVHKELIKTLKADTKSKTDESISSSNNLTNDNCTSSDFLTTPLDEENSLNHVEYSSEDEIPLAHTMTQSSSKHSSEVEQEKEEFSDEDFIRNILNIKKRPRKNLSNKSLAKRCNECGNIYKNYKSLRAHQRSVHISSKEVTNAMDNNIEKPKNKVIKCQSCDYTAKSYAALNYHNRSKHGTESDKLKCKFCSYTSFKKCNLLVHVKYVHEELIKTLKADTKSKTDESISSSNNLNSDNCTSSDFLTTPLDGEKSLNHVEYSSEDEIPLAHTMTQSSSKHSSEVEQEKEEFSDEDFIRNILNIKQRPRKNLSTKSVAKRCNECGIIYKNYKSLRAHQRSVHISSKEVTNAMDNNIEKPKNKVIKCQSCDYTAKSYAALNYHNRSKHGTESDKLKCKFCSYTSLKKCNLLVHVKNVHKELIKTLKADTKSKTDESISSNNNLNNDNCTSSGFLTIPLDEENSLNHVEYSSEDDIPLAHTMTQSSSKYSSEVEQEKEEFSDEDFIRNILNIKKRSRKILSTKSLARRCNECGNIYKNYKSLCAHQRSVHISEDKFSLCPHCGKKYKRKTDLRIHIEKTHAATKDAESAKKPTIPKTREKRFMCTECSYVCATITILNIHRNRHHTGEKPHKCDICNKSFIVPYDLRIHRYLHTGEKPYKCPVCCKGFRDNSHMLKHKRIHSNERPYKCNDCGKSFTQSYNLSVHKRTHLKEKKLNCSICDKFFENKSMLNIHRINENHHDEVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01314052;
90% Identity: iTF_01314052;
80% Identity: -