Ssub015617.1
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- dmd-4
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000158.1:759563-763162[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-25 7.3e-21 74.7 11.0 1 47 48 94 48 94 0.98 2 2 0.69 6e+03 -1.9 0.6 23 31 327 335 325 339 0.72
Sequence Information
- Coding Sequence
- ATGTCCTCCAGCAAAGATACAAATGACACATCAACGACAGCGACGGCGTCTGCAGTCTTGACTGGCAAAAAATCACGCAAATCCCTTAAATCTTTATTATCGTCGGACAGTGCCTCCGCGTTAAGCAAAACCAGTTCGAATCGAGTGCCCAAATGTGCTCGTTGCCGTAATCATGGTTGGATATCGGAATTGCGTGGTCACAAGAAACAGTGCACGTACAAGAATTGTCGTTGTGCCAAGTGTGTGTTAATCTTCGAAAGACAACGTATAATGGCAGCTCAGGTGGCCCTTAAGCGCCAACAGGCTGTTGAAGATGCCATAGCTTTACGTTTGGTGGCCACTAAGACAGGCCAAAACATGGACTGTCTACCTCCAGGCAATATTTTCGATTTGGCTGAAAATCTAAAAGATTTGAAAAGTTCGAATGATAAACAACAGCAAGAAACTGTTGAAGATTTAAGTTTGCCCGGCAAACAAATTGAAAGTTCACCAAAAATTTCCACAAATCTGATCACagccactaccaccaccacttCCACTATGCCCACTGCAACTGCAACTACACTAGAAACTTTCAGTGCTACTACAACGGTTAAAGAAACCTCCAAAGTATCACAAAATGCCATTGATATGTTGGCTCAACTGTTTCCACAACGTAAACGTTCAGTTTTAGAATTGGTCCTGAAACGATGCGATTCGGATTTGGTTAaagcaattgaaaatatttcatcgtcTACCTCTCAAGCTGAAATGGACATGGAAACATCTATTCTTACCAGCTCAAATGCTATGAAGAGTGCTTTTAAACCCGTCTACAGTTCAGGCAATATGCACGTGAAGCCTTTAACTTTAAGCCAAACTTTATGCTCTACAGCCACTGCTTATCCCAAATGGTTTGTGCCTCTTACATTTCCCATTACTTTTCAGGGTCATTTGGCTCCTGCATTGCCACCCGCAACTTTGCCACCGCTAACTTCACGTTGTACGCTACCAAATTGTGCTTGCCTAGAGGGTTATCAATTCAATTGTTCGTAA
- Protein Sequence
- MSSSKDTNDTSTTATASAVLTGKKSRKSLKSLLSSDSASALSKTSSNRVPKCARCRNHGWISELRGHKKQCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQNMDCLPPGNIFDLAENLKDLKSSNDKQQQETVEDLSLPGKQIESSPKISTNLITATTTTTSTMPTATATTLETFSATTTVKETSKVSQNAIDMLAQLFPQRKRSVLELVLKRCDSDLVKAIENISSSTSQAEMDMETSILTSSNAMKSAFKPVYSSGNMHVKPLTLSQTLCSTATAYPKWFVPLTFPITFQGHLAPALPPATLPPLTSRCTLPNCACLEGYQFNCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313031; iTF_01313833; iTF_01314704;
- 90% Identity
- iTF_01313833;
- 80% Identity
- -