Ssub000821.1
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- Mblk-1
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000003.1:1920269-1947170[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 5.6e-11 42.9 0.0 1 45 442 487 442 487 0.95 2 2 1.3e-18 3.8e-15 56.2 0.0 1 43 921 964 921 966 0.95
Sequence Information
- Coding Sequence
- ATGAAGGTACATTTCGTTGCTTTCCCTGAACGTTCATCTAATTCAACCATAAGACCTTATTCGCTATCCTTATCTGGCTTAGAACGGGTCGCTGAGGAACTAATGGGGCGCAGGAAATGGAAGCAATATCAAGAATCATTAATGCGAACCCACTTAAATTCCGACCAATTTGTTGCATCAATCGAAGACAACAATATCGAACTGAAGAAAGAGCTGGATAACTTTCATAGTAAAAACCTGGAATTTATCGATATACTACCACAAGCcgtagcagcaacaacaacaacaacaatagaaaactCTAACCTCGAAGAGAACCACCGCAAAGATAGTAGAAATATACCCTTAAAggagcaacagcagcaacaaaaagcaaaagaagaaaacgaaacagAAGACGAGCAAGTAAAGAATATCCAACATCACATTAAATTAGAAGCAGAAGTTAATCAAACACAATCAGAACACTTTAAAGACAAAACAGCATCACAAATTGCCAACAATACTGCATCACTTCAGAtagccaataataataatagcaacaacaacaacatcaccataaccttaaataataataataataacaacaacaccacatCATCGACTAAAATTGGAACAGCAAACGAAGCAAAAATCCAGATTGAAACGTTGTCAACACCAcaaacaccaacaacaccaccaccaccacctgaACCCATCGATTGGAAACCGAATGAAAAGTGTCATTTTTGTATTAACGGTAAACTACTCACAGTGAACGCTAAAGGTGAATTAGTGGCCGAATCTGGCCCAACTGGGTCTGAAACGGACCACATACAAAAGctggATTGCGAAAGTGATTCAAACGAATCAATTTCAAACGCTGTTGTCTCAACCGCTTCGGGCAATACGAATGGTAATCTACCATTAATGACTGGTGCCGGTTCGTTGACGGATAGTAATCCTACAACCTTAAATAAGTTACTAACACAAAAAATGGCTTCTATGGATTCGGTGGCAGCACAATTAGCCGCCATACAATCAATATTACCAAATCTCAATTGGATGagtcaacaacagcagcagcagcagcagcaacagcagcagcaacgacaacagcaacaatctcAACCAGATTCGGTTATACCAACTACCTCAGATACATTAGCCGCCGCAATAAGTCCCTCTCTAAAGGATTCACCCAGTCCCAGTGATGCCACCGGTGAACAGCCTTTAGATTTAAGTTCCAAACCATCTCCAAATTCATCAATAAGTGGTGACTTGAAGAGCATTAGAATAAAATCATCACGTGCTACACCCGTTCCTTCGACTCGTCGCACTTACAGTGAAGAAGATTTAAATTGTGCTGTACAGGACATCATATCCGGTAAATTGGGTACCCGAAAAGCAGCCGTTCAGTACAATGTACCACGTTCGACGTTGCGCAATAAGATCTACAAGTTGACCGCCGAAGCGAAACGTAATAACGAACCGGCCCCACCCGAACTATTGCAACTGCAGCAAGAGCTGGAAAAGGATATGTCCGGAGATGAGGACGATGTGGAGAGCAATGCGTCGACACCACAACCGGAAGATGCAGTTGTAAGGCTTATTCCGACGtcgaatattttaaagaaattatgcaCCAACAATGGTGACGGCACGGAATTGGGGTGCGATACCGAAGAGCATGTGCTGTTGCACCGTTCACCCAAGCCGGCTCATATAGAATCGTCGAAACCTCAAACATGTGAGTCGACTTCTGTAGGCGATCTCACCACAACTCAAGCCCCCCAAGTACCAGCTTTAGATGCCGCATTGCCACTTTTGTTGCGAACACTTTTACTGTCCGACAAAGGTATACGTGATCTCTTCAGTGCTCTGCTGTCCagcaatttaaaagatttactaTTGGGCACTACAGCGGCGACGACCAGCAGTGCGGCAACGCTTAGCAGCAGTGAGAGTTTGAATAGCAATCTTAACAATGGTAATCAACAGCAGCAGGACTACCGTTCACTCTTGCAGCTGTtgttgcaacagcaacagcaacagcagcaacaccaGCAACAGCATCAACCGACTTCATATGCTACCGGCCGCCGTTTACCAAAGTCTGATACACCCGAAACGAATTCTTCTGTGGATCCTAATGAGGCCTGCGATGATCCCGCGGCTATATTGAAAATTCCGTCCTATACACCGGTGGCAGGACCTTCGAACTCCTTGGGTGCCAGCAGTTCCCGTGCATCGCCCGCTTTACTGTGtcacagcaataacaacagcaattcaAACCGCAATGGCAACAGTCCGGACCAATTGCTTCTGGCGGCCGCTGTACAAAAGCAGTTTAGCAGTAAAAATCTTTCCGTAACCCCTCCTCTAATGCACACGAGAGTCGACGGCAGTCCCTCTCCCCAAACGATGCGCATAAGTGATGTTATAGCCAGTAGCATACAGCGCACTATGAACGAACAGGCCAATAAGGAGGCCGCCTCGGTTTCCCTGCTTAACTTTACTACAGCAGCGGAAGCGGAACGCAACCATGCTCTAGCAATGGGGAATGATTATAAAAAGCCCACCATTTCGGTGGTGAAAAATATAGGCGGCACGGATACCTCACGATTTGGTGCGGCTCCAAATCTATTGGCAGCCGCTCAACATCACCATCATTCGGCTCATCTGCAGCATTCCCACCACCATCATTTAAGTCGCCAAGAAGCCGCCGCTTTGGCAGCCGGCAAGGGTACGCGACCAAAACGTGGTAAATATCGCAACTATGACCGCGATAGTCTAGTTGAAGCCGTTAAAGCAGTACAGCGTGGTGAAATGTCAGTCCACCGAGCTGGCAGTTATTACGGTGTGCCCCACTCTACATTGGAGTATAAGGTCAAGGAGCGTCATCTAATGAGGCCACGCAAACGTGAACCCAAACCACAACCCGGCTTAGACGGCACTAGCAGTAGTTCAAAAACAAATGCCAACATTCCTGGAAACCTTTCCGCTAAGACGCTTAACAGCGCCAATAATAGCCTAAAATTAACTAGCGGAGcgggtaataaaaataataatggttcTGGTACAAACGCCGCTAGCTTTGCGAGTAGTAATGCTAATGGCATGAAACTGTCCATATTTGAATCCAACTTGCAGCATTTACCCTATAGCCCCCAGTTGTTTTGGCCTCACAACCAGGCAGCCTTTGGTCAACTTCAAATGGATTTTAATCGCAATACGACAGCACCCTCAGCCGCCTCCCCAACAGACAACAGCTCAGACATACTAAAGAATCATATGCAACGGTATCAGGATAGCACCACCAACTCCTCCAACGGTCCTAGTCCGGTCTCAAGTCCGGTGCTCTCAGGTCAAGATATAAATCGTGCCCGAGAACTGTACGAAAGCAATGCTGCAAACGGCGCTTCATTTCTAGACGGCATCATACGCAAGACCCTCGATCGCAAAACAAATGAAGTGAATGCGGCCAGTACTAGTGCATCATCGGGCGGTGGGGTTTTGCTCGACCAGCTGCTGATGAAGAAAACACCTTTACCCTTTACCAATAATCGCAATAATGAATTTAACACCAGTATCTCACCCTCACCGATGGCGGCGCACAAACGCTCCGGTAGTCCTTTGTCGCTGTGTAGCAGCTCTACGATTAAACGAGAACGTTGTTCACCGCATAGTGCTGCCAGCGATGATGATGAGACCTCACATAGCGGCTTAGATGAGAGTTATgagaataacaacaataataacaacagcaaaactGGTAATGGCCAAGGACTAAAGGCCTTGGACATAAGCCAAACACGTAGTCGTGTAGCTTCCCGCGATTCCAATTCCGAAACGGACAATAGCAGTATGAAAAGTGAAATACACATGAGcaatcatcatcaccatcatcatcatccagcTACTGGGCATCCTAACAATATCAATAATTTAATGGATATCAATGGCGGTGGCGGTGGCGGCAGCGGTGGTGGTAGTGGCGGTGTTACTGTCAAAACTGAAATTCCTAATCATGAAACCACGAGCACCTCTATTCTACAAGAGAAACTCTCACAAATCAAAGCCGAACAGCAAGAGAATGAAGAGAATTTATAG
- Protein Sequence
- MKVHFVAFPERSSNSTIRPYSLSLSGLERVAEELMGRRKWKQYQESLMRTHLNSDQFVASIEDNNIELKKELDNFHSKNLEFIDILPQAVAATTTTTIENSNLEENHRKDSRNIPLKEQQQQQKAKEENETEDEQVKNIQHHIKLEAEVNQTQSEHFKDKTASQIANNTASLQIANNNNSNNNNITITLNNNNNNNNTTSSTKIGTANEAKIQIETLSTPQTPTTPPPPPEPIDWKPNEKCHFCINGKLLTVNAKGELVAESGPTGSETDHIQKLDCESDSNESISNAVVSTASGNTNGNLPLMTGAGSLTDSNPTTLNKLLTQKMASMDSVAAQLAAIQSILPNLNWMSQQQQQQQQQQQQQRQQQQSQPDSVIPTTSDTLAAAISPSLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKSIRIKSSRATPVPSTRRTYSEEDLNCAVQDIISGKLGTRKAAVQYNVPRSTLRNKIYKLTAEAKRNNEPAPPELLQLQQELEKDMSGDEDDVESNASTPQPEDAVVRLIPTSNILKKLCTNNGDGTELGCDTEEHVLLHRSPKPAHIESSKPQTCESTSVGDLTTTQAPQVPALDAALPLLLRTLLLSDKGIRDLFSALLSSNLKDLLLGTTAATTSSAATLSSSESLNSNLNNGNQQQQDYRSLLQLLLQQQQQQQQHQQQHQPTSYATGRRLPKSDTPETNSSVDPNEACDDPAAILKIPSYTPVAGPSNSLGASSSRASPALLCHSNNNSNSNRNGNSPDQLLLAAAVQKQFSSKNLSVTPPLMHTRVDGSPSPQTMRISDVIASSIQRTMNEQANKEAASVSLLNFTTAAEAERNHALAMGNDYKKPTISVVKNIGGTDTSRFGAAPNLLAAAQHHHHSAHLQHSHHHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGTSSSSKTNANIPGNLSAKTLNSANNSLKLTSGAGNKNNNGSGTNAASFASSNANGMKLSIFESNLQHLPYSPQLFWPHNQAAFGQLQMDFNRNTTAPSAASPTDNSSDILKNHMQRYQDSTTNSSNGPSPVSSPVLSGQDINRARELYESNAANGASFLDGIIRKTLDRKTNEVNAASTSASSGGGVLLDQLLMKKTPLPFTNNRNNEFNTSISPSPMAAHKRSGSPLSLCSSSTIKRERCSPHSAASDDDETSHSGLDESYENNNNNNNSKTGNGQGLKALDISQTRSRVASRDSNSETDNSSMKSEIHMSNHHHHHHHPATGHPNNINNLMDINGGGGGGSGGGSGGVTVKTEIPNHETTSTSILQEKLSQIKAEQQENEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314581;
- 90% Identity
- iTF_01313726;
- 80% Identity
- -