Scar010121.1
Basic Information
- Insect
- Sarcophaga carnaria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_958299815.1
- Location
- OY283150.1:41507129-41533604[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-14 6.1e-11 42.9 0.0 1 45 426 471 426 471 0.95 2 2 1.5e-18 4.1e-15 56.2 0.0 1 43 905 948 905 950 0.95
Sequence Information
- Coding Sequence
- ATGCTGGTAAAAGGAAGTCGTACTTTTtGCTTAGAACGGGTCGCTGAGGAACTAATGGGGCGCAGGAAATGGAAGCAATATCAAGAATCATTAATGCGAACCCACTTAAATTCCGACCAATTTGTTGCATCAATCGAAGACAACAATATCGAACTGAAGAAAGAGCTGGATAACTTTCATAGTAAAAACCTGGAATTTATCGATATACTACCACAAGCcgtagcagcaacaacagcaacaacaatagaaaactCTAACCTCGAAGAGAACCACCGCAAAGATAGTAGAAATATACCCTTAAAggagcaacagcagcaacaaaaagcaaaagaagaagACGAAACAGAAGACGAGCAAGTAAAGAATATCCAACATCACATTAAATTAGGAGCAGAAGTTAATCAAACACAATCAGAACACTTTAAAGACAAAACAgCATCACAAATTGCCAACAATACTGCATCACTTCAGAtagccaataataataataataacaacaacaacaacatcaccataaccttaaataataataataataacaacaacaacaccacatCGACTACAATTGGAACAGCAAACGAAGCAAAAATCCATATTGAAACGTTGTCAACACCACAAACAccaacaacaccaccaccacctgaACCCATCGATTGGAAACCGAATGAAAAGTGTCATTTTTGTATTAACGGTAAACTACTCACAGTGAACGCTAAAGGTGAATTAGTGGCCGAATCTGGCCCAACTGGGTCTGAAACGGACCACATACAAAAActggatTGCGAAAGTGATTCAAACGAATCAATTTCAAACGCTGCTGTCTCAACCGCTTCGGGCAATACGAATGGTAATCTACCATTAATGACTGGTGCCGGTTCGTTGACGGATAGTAATCCTACAACCTTAAATAAGTTACTAACACAAAAAATGGCTTCTATGGATTCGGTGGCAGCACAATTAGCCGCCATACAATCAATATTACCAAATCTCAATTGGATGagtcaacaacagcagcagcagcagcagcaacagcagcagcaacgacaacagcaacaatctcAACCAGATTCGGTTATACCAACTACCTCAGATACATTAGCCGCCGCAATAAGTCCCTCTCTAAAGGATTCACCCAGTCCCAGTGATGCCACCGGTGAACAGCCTTTAGATTTAAGTTCCAAACCATCTCCAAATTCATCAATAAGTGGTGACTTGAAGAGCATTAGAATAAAATCATCACGTGCTACACCCGTTCCTTCGACTCGTCGCACTTACAGTGAAGAAGATTTAAATTGTGCTGTACAGGACATCATATCCGGTAAATTGGGTACCCGAAAAGCAGCCGTTCAGTACAATGTACCACGTTCGACGTTGCGCAATAAGATCTACAAGTTGACCGCTGAAGCGAAACGTAATAACGAACCGGCCCCACCCGAACTATTGCAACTGCAGCAAGAGCTGGAAAAGGATATGTCCGGAGATGAGGACGATGTGGAGAGCAATGCGTCGACACCACAACCGGAAGATGCAGTTGTAAGGCTTATTCCGACGtcgaatattttaaagaaattatgcaCCAACAATGGTGACGGCACGGAATTGGGGTGCGATGCCGAAGAGCATGTGCTGTTGCACCGTTCACCCAAGCCGGCGCATATAGAATCGTCGAAACCTCAAACATGTGAGTCGACTGCTGTAGGCGATCTCACCACAACTCAAGCCCCCCAAGTACCAGCTTTAGATGCCGCATTGCCACTTTTGTTGCGAACACTTTTACTGTCCGACAAAGGTATACGTGATCTCTTCAGTGCTCTGTTGTCCagcaatttaaaagatttactaTTGGGCACTACAGCGGCGACGACCAGCAGTGCGGCAACGCTTAGCAGCAGTGAGAGTTTGAATAGCAATCTTAACAATGGTAATCAACAGCAGCAGGACTACCGTTCACTATTGCAGCTGTtgttgcaacagcaacaacaacagcagcaacaccagcaacagcagcaaccgACTTCATATGCTACCGGCCGCCGTTTACCAAAGTCTGATACACCCGAAACGAATTCTTCTGTGGATCCTAATGAGGCCTGCGATGATCCCGCGGCTATATTGAAAATTCCGTCCTATACACCGGTGGCAGGACCTTCGAACGCCTTGGGTGCCAGCAGTTCCCGTGCATCGCCCGCTTTACTGTGtcacagcaataacaacagcaattcaAACCGCAATGGCAACAGTCCGGACCAATTGCTTCTGGCGGCCGCTGTACAAAAGCAGTTTAGCAGTAAAAATCTTTCCGTAACCCCTCCTCTAATGCACACGAGAGTCGACGGCAGTCCCTCTCCCCAAACGATGCGCATAAGTGATGTTATAGCCAGTAGCATACAGCGCACTATGAACGAACAGGCCAACAAGGAGGCCGCCTCGGTTTCCCTGCTTAACTTTACTACAGCAGCGGAAGCGGAACGCAACCATGCTCTAGCAATGggaaatgattataaaaagCCCACCATTTCGGTGGTGAAAAATATAGGCGGCACGGATACCTCACGATTTGGTGCGGCTCCAAATCTATTGGCAGCCGCTCAACATCACCATCATTCGGCTCATCTGCAGCATTCCCACCACCATCATCTAAGTCGCCAAGAAGCCGCCGCTTTGGCAGCCGGCAAGGGTACGCGACCAAAACGTGGTAAATATCGCAACTATGACCGCGATAGTCTAGTTGAAGCCGTTAAAGCAGTACAGCGTGGTGAAATGTCAGTCCACCGAGCTGGCAGTTATTACGGTGTGCCCCACTCTACATTGGAGTATAAGGTCAAGGAGCGTCATCTAATGAGGCCACGCAAACGTGAACCCAAACCACAACCCGGCTTAGACGGCACTAGCAGTAGTTCAaaaacaaatgccaacattCCTGGAAACCTTTCCGCTAAGACGCTTAACAGCGCCAATAATAACCTAAAATTAACTAGCGGAGcgggtaataaaaataataatggttcTGGTACAAACGCCGCTAGCTTTGCGAGTAGTAATGCTAATGGCATGAAACTGTCCATATTTGAATCCAATTTGCAGCATTTACCCTATAGCCCCCAGTTGTTTTGGCCTCACAACCAGGCAGCCTTTGGTCAACTTCAAATGGATTTTAATCGCAATACGACAGCACCCTCAGCCGCCTCCCCAACAGACAACAGCTCAGACATACTAAAGAATCATATGCAACGGTATCAGGATAGCACCACCAACTCCTCCAACGGTCCTAGTCCGGTCTCAAGTCCGGTGCTCTCAGGTCAAGATATAAATCGTGCCCGAGAACTGTACGAAAGCAATGCTGCAAACGGCGCTTCATTTCTAGACGGCATCATACGCAAGACCCTCGATCGCAAAACAAATGAAGTGAATGCGGCCAGTACTAGTGCATCATCGGGCGGTGGGGTTTTGCTCGACCAGCTGCTGATGAAGAAAACACCTTTACCCTTTACCAATAATCGCAATAATGAATTTAACACAAGTATCTCACCCTCACCGATGGCGGCGCACAAACGCTCCGGTAGTCCTTTGTCGCTGTGTAGCAGCTCTACGATTAAACGAGAACGTTGCTCACCGCATAGTGCTGCCAGCGATGATGATGAGACCTCACATAGCGGCTTAGATGAGAGTTAtgagaataacaacaataataacaacagcaaaactGGTAATGGCCAGGGACTAAAGGCCTTGGACATAAGCCAAACACGTAGTCGTGTAGCTTCCCGCGATTCCAACTCCGAAACGGACAATAGCAGTATGAAAAGTGAAATACACATGAGcaatcatcatcaccatcatcatccaGCTACTGGGCATCCTAACAATATCAATAATTTAATGGATATAAATGGCGGTGGCGGTGGCGGCAGCGGTGGTGGTAGTGGCGGTGTTACTGTCAAAACTGAAATTCCTAATCATGAAACCACGAGCACCTCTATTCTACAAGAGAAACTCTCACAAATCAAAGCCGAACAGCAAGAGAATGAAGAGAATTTATAG
- Protein Sequence
- MLVKGSRTFCLERVAEELMGRRKWKQYQESLMRTHLNSDQFVASIEDNNIELKKELDNFHSKNLEFIDILPQAVAATTATTIENSNLEENHRKDSRNIPLKEQQQQQKAKEEDETEDEQVKNIQHHIKLGAEVNQTQSEHFKDKTASQIANNTASLQIANNNNNNNNNNITITLNNNNNNNNNTTSTTIGTANEAKIHIETLSTPQTPTTPPPPEPIDWKPNEKCHFCINGKLLTVNAKGELVAESGPTGSETDHIQKLDCESDSNESISNAAVSTASGNTNGNLPLMTGAGSLTDSNPTTLNKLLTQKMASMDSVAAQLAAIQSILPNLNWMSQQQQQQQQQQQQQRQQQQSQPDSVIPTTSDTLAAAISPSLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKSIRIKSSRATPVPSTRRTYSEEDLNCAVQDIISGKLGTRKAAVQYNVPRSTLRNKIYKLTAEAKRNNEPAPPELLQLQQELEKDMSGDEDDVESNASTPQPEDAVVRLIPTSNILKKLCTNNGDGTELGCDAEEHVLLHRSPKPAHIESSKPQTCESTAVGDLTTTQAPQVPALDAALPLLLRTLLLSDKGIRDLFSALLSSNLKDLLLGTTAATTSSAATLSSSESLNSNLNNGNQQQQDYRSLLQLLLQQQQQQQQHQQQQQPTSYATGRRLPKSDTPETNSSVDPNEACDDPAAILKIPSYTPVAGPSNALGASSSRASPALLCHSNNNSNSNRNGNSPDQLLLAAAVQKQFSSKNLSVTPPLMHTRVDGSPSPQTMRISDVIASSIQRTMNEQANKEAASVSLLNFTTAAEAERNHALAMGNDYKKPTISVVKNIGGTDTSRFGAAPNLLAAAQHHHHSAHLQHSHHHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGTSSSSKTNANIPGNLSAKTLNSANNNLKLTSGAGNKNNNGSGTNAASFASSNANGMKLSIFESNLQHLPYSPQLFWPHNQAAFGQLQMDFNRNTTAPSAASPTDNSSDILKNHMQRYQDSTTNSSNGPSPVSSPVLSGQDINRARELYESNAANGASFLDGIIRKTLDRKTNEVNAASTSASSGGGVLLDQLLMKKTPLPFTNNRNNEFNTSISPSPMAAHKRSGSPLSLCSSSTIKRERCSPHSAASDDDETSHSGLDESYENNNNNNNSKTGNGQGLKALDISQTRSRVASRDSNSETDNSSMKSEIHMSNHHHHHHPATGHPNNINNLMDINGGGGGGSGGGSGGVTVKTEIPNHETTSTSILQEKLSQIKAEQQENEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314581;
- 90% Identity
- iTF_01315427; iTF_01312934; iTF_01314581;
- 80% Identity
- -