Basic Information

Insect: Sarcophaga peregrina
Gene Symbol: stc
Assembly: GCA_014635995.1
Location: CM025791.1:94482616-94485181[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5 2.1e+04 -3.7 1.6 15 19 324 328 323 328 0.81

2 15 0.043 6.1e+02 1.2 0.2 4 10 357 363 356 364 0.95

3 15 0.00011 1.5 9.6 17.8 4 19 371 386 369 386 0.93

4 15 1.3 1.8e+04 -3.5 1.5 6 10 412 416 411 416 0.88

5 15 3.6e-08 0.00051 20.6 15.0 3 19 424 440 422 440 0.92

6 15 2 2.8e+04 -4.4 0.4 8 11 445 448 445 448 0.80

7 15 1.5e-07 0.0021 18.6 20.4 1 19 480 498 480 498 0.98

8 15 1.1e-05 0.15 12.7 14.4 4 18 546 560 539 561 0.86

9 15 0.0051 72 4.2 9.3 1 11 585 595 585 596 0.96

10 15 1.9 2.7e+04 -4.1 1.1 4 10 600 606 600 606 0.58

11 15 3.5e-10 5e-06 27.1 15.5 1 18 612 629 612 630 0.97

12 15 1.3 1.8e+04 -3.5 0.9 6 10 659 663 659 664 0.81

13 15 2 2.8e+04 -8.3 11.0 10 18 677 686 666 687 0.76

14 15 4.9e-08 0.0007 20.2 14.7 1 16 723 738 723 748 0.92

15 15 2.1e-07 0.0029 18.2 13.3 1 19 755 774 755 774 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5	2.1e+04	-3.7	1.6	15	19	324	328	323	328	0.81
2	15	0.043	6.1e+02	1.2	0.2	4	10	357	363	356	364	0.95
3	15	0.00011	1.5	9.6	17.8	4	19	371	386	369	386	0.93
4	15	1.3	1.8e+04	-3.5	1.5	6	10	412	416	411	416	0.88
5	15	3.6e-08	0.00051	20.6	15.0	3	19	424	440	422	440	0.92
6	15	2	2.8e+04	-4.4	0.4	8	11	445	448	445	448	0.80
7	15	1.5e-07	0.0021	18.6	20.4	1	19	480	498	480	498	0.98
8	15	1.1e-05	0.15	12.7	14.4	4	18	546	560	539	561	0.86
9	15	0.0051	72	4.2	9.3	1	11	585	595	585	596	0.96
10	15	1.9	2.7e+04	-4.1	1.1	4	10	600	606	600	606	0.58
11	15	3.5e-10	5e-06	27.1	15.5	1	18	612	629	612	630	0.97
12	15	1.3	1.8e+04	-3.5	0.9	6	10	659	663	659	664	0.81
13	15	2	2.8e+04	-8.3	11.0	10	18	677	686	666	687	0.76
14	15	4.9e-08	0.0007	20.2	14.7	1	16	723	738	723	748	0.92
15	15	2.1e-07	0.0029	18.2	13.3	1	19	755	774	755	774	0.97

Sequence Information

Coding Sequence: ATGAGGACAGTCGAAGTGATTGGTGATACTAAAGACAATGAGAAAAATTTAGAGTCCATATttgagaaagaggaaaaaagacAGCAGCGTCATGAACGTAACAGAGGAAATAATCGTCATCAGAATAAACATGACAAGgagaatcataaacgaaataataatcGTATGGAAAAGAATATGGAAAGATTTTCCAGGAACTTACaagagaaaaatcaaaataatgatTCAGCATCGAATTCGAATTCGTCAACACCCTCGTTGACTTTGAACAATGGTAGagatcagcagcagcagcagcaacaacagcagcagcagcaaccaGGGGCTTCAAAATCATCAGGAGCTTTTAGTAAAAACAGTCGCAATGCTAATGCTAATGGtaataataatggaaatggCGATAAACCAAGAAATAATGAAgcacaaacacaaaataataataacaataacaagggGGATAAAAACAATGCCAATAATAAACGTTACCAAAATGGCCGTCGTTCACAGGACTTTGGTGAACGTGAAGATCGCTATGAACGTTACATAGAACGTGGTGAACGTTCGGATCGTGGTCACAATCAACGTAATCAACAGCAGCGCAATGACTATCATCAACGTTACGACAATTATCGCAGCAATAAAAGACGTGACGATTGGAATCGTAATCGTGATCGCATTAATGGCTTTCGTGTCGAAGAAAAATATGACAATGATAATGGCAAAGACAGTCCATTGCCCTCACCCGAAAAGAAATCACCCAAAAAGGTATACGAAAAGGAGAATGAGAAACTCTCACAGCGCGAGAAACTCATCAGAGACATAGAAACTAGACGTCTGGAATGTTTGGTTTGTGTAGAGCCGATTAAGGCTCATCAGGGTGTTTGGTCCTGTCATAATTGTTATCACATACTCCACTTGCAATGTATTATCAAATGGGCCTCTTCCTCGAAATCAGATGATGGCTGGCGTTGTCCAGCTTGCCAAAATGTCGAAAAAGATGTTCCACGTGATTACTATTGTTTCTGTGGTAAATTGAAAAATCCTACAAATAATCGCCAGGACATAGCACACTCTTGTGGTGAAGTTTGTGGCCGCATTGAGGGTTGTCCTCATGCCTGCACATTACAGTGTCATCCAGGTCCTTGCCCTCCATGTCAAGCTCAAGTCAAGCGTGAATGCGGTTGTGGTAAAACATCCAAGATAATGCAATGCTGCATCAAAGAAATCATTGAATGCGAGTCCACCTGTGAGAAGCTATTGAACTGTGAATTGCACACATGTCAGGAAAAATGTCACGAAGGCAAATGTCCACCGTGCAAAGAGAAAGTTGATCAAAAATGCCACTGTTCGAAACAAGAACGCCAAGTAACTTGCACACGTGAATCGCACGACAAACACAATTATTCGTGTGGCAAACCTTGCGGTAAGGATCTGTCGTGTGGCAATCATAAATGTAAGGATTGTTGTCATCCCGGTGAGTGTAGACCTTGTAAATTGAGTCCTGATTTTGTAACATCCTGCCCATGTGGCAAAATGCCTATAATAGCGGGTCAACGCAAATCATGTTTGGATCCCATACCCGTGTGTGAAGGTGTATGTGGCAAGACTTTGAAATGTGGCAAGGCCACCAATCCCCATCACTGTACTTCCAAATGCCATTTGGGTAATTGTCCACCATGCAATAAGCAAACAGCGCTGTCAACCAGGGCCGACGATGCCAGATGCAAGAAACGCTGTACGAAAAAACGTTCCTGTGGCAAACACAAATGTAATCAAGAGTGCTGTATAGACATCGATCATTTCTGCCCACTGCCTTGTAATTATACGCTCTCTTGTGGTAAGCATAAGTGTGATCAGCCTTGTCATCGCGGCAATTGTCCGCCCTGCTATCGTTCCTCTTTCGAAGAACTTTTCTGTGAATGTGGTGCTGAGGTAATTTATCCACCTGTGCCATGTGGCACTAAGCGTCCAGTTTGCAAGCGTCCCTGTTCACGTAAGCACCCTTGTGATCATCCTCCCCAACATAACTGTCATTCGGCTGCCACATGTCCTCCTTGTATGATGTTCACGACGAAATGGTGTTTTGGCCAGCATGAACAACGTAAAACCATTCCGTGCTCTCAGCAGAGTTTCTCGTGTGGTTTGGCTTGCAATAAGCCACTGCCTTGTGGACGACACAAGTGCATAAAGACTTGCCATGAGGGGCCATGTCAAGCGCCCGGcgaaatatgcaaacaaagcTGTACTACACCACGTTCCACTTGCGGTCACAAATGTATGGCTCCCTGTCATAATGGCGACTGTCCAGATTCGCCTTGTAAGGAAATGGTTGAAGTTCAATGTGAATGTGGAAATCGCAAACAAATGCGTACTTGTGCGGAATTGGCTAGAGAATTTAGTCGCATTGCTACCTGCTCAGCTGGCTTCCTCTATGGCTGA
Protein Sequence: MRTVEVIGDTKDNEKNLESIFEKEEKRQQRHERNRGNNRHQNKHDKENHKRNNNRMEKNMERFSRNLQEKNQNNDSASNSNSSTPSLTLNNGRDQQQQQQQQQQQQPGASKSSGAFSKNSRNANANGNNNGNGDKPRNNEAQTQNNNNNNKGDKNNANNKRYQNGRRSQDFGEREDRYERYIERGERSDRGHNQRNQQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYDNDNGKDSPLPSPEKKSPKKVYEKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPTNNRQDIAHSCGEVCGRIEGCPHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCCIKEIIECESTCEKLLNCELHTCQEKCHEGKCPPCKEKVDQKCHCSKQERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPGECRPCKLSPDFVTSCPCGKMPIIAGQRKSCLDPIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTALSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHKCIKTCHEGPCQAPGEICKQSCTTPRSTCGHKCMAPCHNGDCPDSPCKEMVEVQCECGNRKQMRTCAELAREFSRIATCSAGFLYG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00922597;
90% Identity: -
80% Identity: -