Sper006662.2
Basic Information
- Insect
- Sarcophaga peregrina
- Gene Symbol
- Zfy1
- Assembly
- GCA_014635995.1
- Location
- CM025790.1:27392598-27398132[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.029 2e+02 2.8 0.0 27 51 235 259 228 262 0.88 2 12 1.3 9e+03 -2.5 0.0 30 45 265 280 263 287 0.80 3 12 0.011 81 4.1 0.1 26 50 289 313 269 317 0.87 4 12 0.084 5.9e+02 1.3 0.1 21 49 345 373 334 376 0.81 5 12 0.99 7e+03 -2.1 0.0 26 43 409 426 405 431 0.80 6 12 0.001 7.1 7.5 0.1 21 48 431 458 426 461 0.92 7 12 0.0055 39 5.1 0.0 27 45 466 484 461 487 0.89 8 12 3.3 2.3e+04 -3.8 0.0 17 26 501 510 495 511 0.65 9 12 0.00094 6.6 7.6 0.1 22 44 555 577 552 586 0.90 10 12 0.027 1.9e+02 2.9 0.0 26 44 586 604 577 609 0.85 11 12 0.0021 15 6.5 0.1 22 46 611 635 608 640 0.87 12 12 0.33 2.4e+03 -0.6 0.1 26 48 643 665 636 666 0.85
Sequence Information
- Coding Sequence
- atgatTTGTCGGCTATGTCTAAAGGATATTCCAAAGGAATCCAGTATAAAGTTATATGAGAATGTGGATCCAACAACCGAAGCAATGGAAATGGTTAAACTGATTGAAAAGTATCTGGAAATCGAAATAAAACATAACGATGTTGTTTCGACAATTATCTGCCAGGATTGTTCTGATCATTTGGAGGAGTTCCATAAATTTTCACAACAAGTGGCCGAAAAACAACTAACGCTGCGTAATGAATTTCTGGACGTAAATCTTAAAAAAGAGTTTAatcttgatgatgatgataatgatgtctGGGATAGTGATGATCCCGAGGATAAAATACGGATACATATACAAGATAATGCCCAAGAAATAACTGTCACATGTCCAATAGATGTTTTCAAAGATGAAAGCAACAACGATGAAGATGATGAACAGGAAATGCCTACTGAGGATTTACTCGATACGAGTATAGACAATGATGAGAAGGATATAATTGCTCCAGATAGTGTAGCTATGCATGACCTCAACAGTCAGCATTCATCAGATGACGATGTGCCACtcataaaattgaaatcagTTAGAAAGACTTCTCAGCAAAAGAagaaacgtaaaaaattaactatTAAGCCTGATTTGGatcgtaaagaaaaaaaaccaattcaGAAAAAGTTATCAGCACAGAAAGAAGTTGCTATGCTAATGGACTTATTATGCGATATTTGTCAAGCCAAAGTTGACACATGGAAAGCCTTAAGGGAACATTTCTTATTTGCCCATACCAAAACACCATACATTAAATGCTGTGATATTATTTACCGTAAACCACGAGCACTTGCCGATCATCTTCAATGGCATAAAAAtccagaaatgtttaaatgccaaatttgtaatcaaaataTGTCCAGTGCACGAAATTTAACCACACATATAACAACGGAACATCCAGATAAGGCGGATATAATTGAGTTTTATGAATGTGAACATTGTTCGAAACGTGTGCGAAAttataacttatttaaaaagcatttacGTTCTCACAATAAAGAGAAGGAAGTTGAATGTCATATTTGCAATAAAAGATTTGCATCAGAATACCATTTACAACGTCATGTCGATACGTTTCATAAGGGAAAAACATTTCATGTCTGTGACATTTGTGGTcgtaaatacaaatgcaaagaCTCATTTAAGAAACATTGTGACGAACATAAGGGCATTGTTGATCCGGCTGTTCAATGTTCAATATGTAATAAATGGCTAAAGAATCTTAACAGTTTACGTATACACCGTTTCGTACACGAGGAACATCCGAACCACTGTGATGTATGTGGCAAAAGCTTCAAAACAAAACGTAGCTTAAATAGACACACAGAATACTGGCATAAACTCGATATGAATTTACATTGTAATTTTTGCGAAAAAGTATTTCGTGAAAAACGTAACCTAGACGAGCATATGGCTATACATACTGGCACTCAACTATATAATTGCCCACATTGTGGCAAAGAGTCACGTTCAAgatcaaatatATGTGCAACAATATATCGTTTGCGTAATCACATTGCGTCCGTGCACAATAATATATACCACCATATTTGTGATATTTGtggaaagaaattcaaaacaaagaCATCATTTCAAAAGCACTATGACGAACATCTGGGCATCGTTGAACCACCAGCTCAGTGTACAATTTGCGGCGCATGGCTAAAGAATCAACACAGTTTACGAGTTCATCATCAAACGCATGAGGACACACAATTTGCGTGTGATATTTgtggtaaatttttcaaaactaaaaagaaCTTAAGTCGGCACAAAGGCTATTGGCATCGAAGAGAGCGAAATCTTTCATGTAGTTATTGTGATAAAGTATTTCGTGAAAAACGTAACCTCGATGAACATATGGCCATGCATACAGATACTAATTTATATACGTGCCCACACTGTGGTAAAGAATCAAGATCAAAatcaaatatgtacgtacatataaaaaGGCAGCATCCCGACGAATGGTGGAAATCAAAACAAGAACGCTATAAAATTAAACCCGAAGATGGAGTCGATGAGAGTGAACTAAAGGGAAAGGCTCTTGTAAATAATACTCCCTCAAAGTCGTCACAACAGTCTTCAATTACGGAATAA
- Protein Sequence
- MICRLCLKDIPKESSIKLYENVDPTTEAMEMVKLIEKYLEIEIKHNDVVSTIICQDCSDHLEEFHKFSQQVAEKQLTLRNEFLDVNLKKEFNLDDDDNDVWDSDDPEDKIRIHIQDNAQEITVTCPIDVFKDESNNDEDDEQEMPTEDLLDTSIDNDEKDIIAPDSVAMHDLNSQHSSDDDVPLIKLKSVRKTSQQKKKRKKLTIKPDLDRKEKKPIQKKLSAQKEVAMLMDLLCDICQAKVDTWKALREHFLFAHTKTPYIKCCDIIYRKPRALADHLQWHKNPEMFKCQICNQNMSSARNLTTHITTEHPDKADIIEFYECEHCSKRVRNYNLFKKHLRSHNKEKEVECHICNKRFASEYHLQRHVDTFHKGKTFHVCDICGRKYKCKDSFKKHCDEHKGIVDPAVQCSICNKWLKNLNSLRIHRFVHEEHPNHCDVCGKSFKTKRSLNRHTEYWHKLDMNLHCNFCEKVFREKRNLDEHMAIHTGTQLYNCPHCGKESRSRSNICATIYRLRNHIASVHNNIYHHICDICGKKFKTKTSFQKHYDEHLGIVEPPAQCTICGAWLKNQHSLRVHHQTHEDTQFACDICGKFFKTKKNLSRHKGYWHRRERNLSCSYCDKVFREKRNLDEHMAMHTDTNLYTCPHCGKESRSKSNMYVHIKRQHPDEWWKSKQERYKIKPEDGVDESELKGKALVNNTPSKSSQQSSITE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314847;
- 90% Identity
- iTF_01314017;
- 80% Identity
- iTF_01314847;