Sper010905.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sarcophaga peregrina
Gene Symbol
chinmo
Assembly
GCA_014635995.1
Location
CM025791.1:22040838-22056472[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-25 2.2e-22 79.9 0.2 1 104 22 122 22 128 0.92

Sequence Information

Coding Sequence
ATGGATCCACAACAACAGTTTTGCTTAAAATGGAATTCGTATTCATCAAATTTGGCGATaacattttcaaatcttttcaaatcCGATCTGTTAGCCGATGTGACACTGTCATGCGATGgcaCTGTTTTCAAGGCTCATAAATTAATATTGGCAGCATGTTCGAAAAAGTTTGCCGATCTTTTTGAGACCACACCCACAAACGGCCAGTGCGTGGTTATATTAGAGGCTACATCATCGGATAATATGGCCGCTTTACTAGAGTTTATGTACAAGGGTGAGGTGCATGTATCACAAGAGGCTCTCAACAGTTTTCTAAAATCTGCCGAAAATTTGCAGgtTAAAGGTTTATCAACAGAAACAGGGCGCTTAGCTGCCCAACAGGCCCAGCAGCATATAGAATCCTCTTCCACATTGGATTCACCCACTGGCCGCCGTAGCATACGTAATAGCATAAGCAGTGGTAATGGTGGCAATATGAGTGGTACTGGCCTGGGCAGTGGCACAATGGGCAGTCCGGCAAGTGGCGTAAATGCACCAGGCAGTGGCGCCGGTGGCGGTATTGGCTTGCCAGATCGCTGCCCTAGTACGGGTGGCATTATTGCTGGTCCTCCAGGATCAATTGGTATGggcaataacagcaataacaacagtatAAACAGtggtaatggtggtggtggtggtgtaggTGGTTCTGCCGCTGGTCTTGGTAGCGGTGCTGGCGCCGTTCATCATCTCGGTGGTTCTACCAATAGCTTGAAACAAGAATGCGATTCCCTAATGCATCCAAGTAGCTCTACGTTAGGGGCAATGTCTTCATATGTACCGCCCATGTATCATCGTCCCATGTCCTATGAACCGTTACGCAAGCGTGCCCTCCGTAGCCCATATGCCGAACAAGAAGTACGCGGTAGTGTCTTACGTGATGGCTCCAAAAATCCTTCAGAATGTCCCAGTCCCATAAGCAAACCTCCCTATCATAGGCCATCGTCTAGTGCTTCGTCGACGGCACCAACCGAAGCGGATACAATGCACTCGGAAAGGGCTTCACCACAATCAAGTCGTTTCGATAATCACAGTCCCAGCACTACGGGCGGCGGCAATAATAATGCGCCCAGCAGCTTGGATAGATCCGTTAAATCGGAACGTAATAATTGCAGTACAAAAGAGGCTAATAACGAAGATGATCATGATGATTTAGATGAATCCAGAGaaaaTTGCGCTGAAGATTTACGAGTCAAATTGGAAAATTCTAATTATTCACCTCCACCACCTCCCACCTCAAATACCTCACCCACCACACCTACCGCTTTACTAGAGAGCCTCAAAAACTCGGATGGCACTTTGCCTGGCAGCTTAGCGGCTTCCATAGCTCCGGCCGATATGTTAAACGTTTGGAatgcgacaaaattaaataataaaaacagcgGCATGGTTAATACAGCAGAtgGCAAAAAACTCAAATGCTTATATTGTGATCGTTTGTACGGCTACGAAAcgaatctacgagctcatatacGACAGCGCCATCAAGGTATACGAGTACCATGTCCATTCTGTTCGCGCACATTTACGCGTAACAACACCGTACGCCGTCACATTGCCCGAGAGCACAAGCAAGAAATTGGTTTAAGTGCTGGTGCCACTATTGCACCAGCATCGGTAGCTGCAGCTGCAGCAGCGGCCGCCAATCATTCACAATAG
Protein Sequence
MDPQQQFCLKWNSYSSNLAITFSNLFKSDLLADVTLSCDGTVFKAHKLILAACSKKFADLFETTPTNGQCVVILEATSSDNMAALLEFMYKGEVHVSQEALNSFLKSAENLQVKGLSTETGRLAAQQAQQHIESSSTLDSPTGRRSIRNSISSGNGGNMSGTGLGSGTMGSPASGVNAPGSGAGGGIGLPDRCPSTGGIIAGPPGSIGMGNNSNNNSINSGNGGGGGVGGSAAGLGSGAGAVHHLGGSTNSLKQECDSLMHPSSSTLGAMSSYVPPMYHRPMSYEPLRKRALRSPYAEQEVRGSVLRDGSKNPSECPSPISKPPYHRPSSSASSTAPTEADTMHSERASPQSSRFDNHSPSTTGGGNNNAPSSLDRSVKSERNNCSTKEANNEDDHDDLDESRENCAEDLRVKLENSNYSPPPPPTSNTSPTTPTALLESLKNSDGTLPGSLAASIAPADMLNVWNATKLNNKNSGMVNTADGKKLKCLYCDRLYGYETNLRAHIRQRHQGIRVPCPFCSRTFTRNNTVRRHIAREHKQEIGLSAGATIAPASVAAAAAAAANHSQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01315130; iTF_01162403; iTF_01162733; iTF_01162367; iTF_00679652; iTF_00655462; iTF_00655408; iTF_00655729; iTF_00371785; iTF_00371182; iTF_01397613; iTF_01075014; iTF_01397715; iTF_01194900; iTF_01194517; iTF_01398645; iTF_01398741; iTF_01398071; iTF_01261112; iTF_01074681; iTF_01074620; iTF_01399102; iTF_01261536; iTF_01109478; iTF_01109743; iTF_01109432; iTF_01315974; iTF_01314311; iTF_01315599; iTF_01313912; iTF_01400006; iTF_01399609; iTF_01399678; iTF_01313096; iTF_01313135; iTF_01313394; iTF_00350639; iTF_00350288; iTF_00350320; iTF_01177071; iTF_01174384; iTF_00199986; iTF_00200396; iTF_01236307; iTF_01235855; iTF_00259894; iTF_00259934; iTF_00260256; iTF_01236826; iTF_01237795; iTF_01237294; iTF_00259420; iTF_00259000; iTF_01259356; iTF_01259318; iTF_00742109; iTF_00742031; iTF_00760302; iTF_00760631; iTF_00760218; iTF_01166222; iTF_01165631; iTF_00045775; iTF_00045471; iTF_00045440; iTF_01138607; iTF_01138152; iTF_01374607; iTF_01374186; iTF_00435793; iTF_00435685; iTF_00998195; iTF_00997840; iTF_01019539; iTF_01019862; iTF_01019577; iTF_01427571; iTF_01427619; iTF_01377108; iTF_01376738; iTF_01175253; iTF_00900182; iTF_00899731; iTF_00900813; iTF_00900730; iTF_00901119; iTF_00976086; iTF_00975718; iTF_01202115; iTF_01201733; iTF_01201806; iTF_00717335; iTF_00716854; iTF_00892888; iTF_00816672; iTF_00817560;
90% Identity
iTF_01236307;
80% Identity
iTF_01315130;