Sper023600.1
Basic Information
- Insect
- Sarcophaga peregrina
- Gene Symbol
- bab2
- Assembly
- GCA_014635995.1
- Location
- CM025793.1:87829424-87831795[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-12 1.9e-08 34.5 0.0 4 45 443 484 440 484 0.91 2 2 9.7 2e+04 -3.9 0.8 4 19 581 596 581 597 0.72
Sequence Information
- Coding Sequence
- ATGGGCGGCCCACCAGGCCCTTTGTCATCGCTTGGTCCACCAGAGGGTCAAACGTATTGCCTGCGCTGGAATAATCACAAATCGAATTTGGTGGAGATTTTAGATTCCCTAATTCGAGCAGAAAGTTATGTAGACTGTACTATAATTGTAGACGATAATCAATTCAAGGCCCATCGTGTGATATTAGCTGCCAATTCACCATATTTTGAATCTATTTTACAGGATTTACCCATGGATCACTGTAGCATTATATTTCCCGGTGTAAAGGCTTTCGAAATGCGTGCTTTACTCGAATACATGTATACGGGGGAGGTGAATGTCACCCAAAGTCAAATACCGAAAATAATGCGCATAGCCGAGGAATTAGAGGTGAAGGGGCTATTTGATATGGCcgatttaaaagagaaattcaataaattaagtGAAGAGCATGCAGAGCGTACAACTAGTAATCCTTATACCAGTACATTGGCTCCCACGAATCCATATTTCTCGGTAAGCACTACCTCATCGCCTTCAACAACAGGCCTCCTTACCAATAGTACAAAAGCCAGCCTTAAAGAAAGCGATAATTATCGCAATAATAATTCCTCTGCCGTGATCTCTACCTCGTCTAATATATCGCCTTCAGCGGCACCCTCAAGTAGTTCATCGCCTCCCTATACTAACTATAAATCGCCGTATGCTAGTTTATATACCAAGTCCCCGGGACCAAATGTAAGTCAATCGAATCCTGCCATTCAAGCTCAAACAACCAACAATCAACagactactactacaactactacgtCTAGTAATCTAACGCCTACCAGTGAGCGTTCCCCAGCCCAATGGCCCCTGTCACCTTCGGCAGCTGCTGTTGCCATGTTAAGTTCGGTATATGAGTCTGCCCCCGATATGAATCCTTTAAAACGCAAAAAACTATCCTCTATGTCTAGTATGCTAATGAATCGCGATACACCCATCTTACGCAATGTGTTGGCCCAAACCAATCCGGCCGATTCGTCACAACAACTGTTGCCTTTAATGCCGAATGCATCATCAGGTAATATCAAAACCGATAAGTCATCGTCCTCCGGTTCAGTGAGTGGTGGTAATCTTGGTAATCTTGATAAGAGTTTAAGTAGCCTTAGCAATAATCACAGTTTTAATGGTTCCGATTATGGCGACAAGAAATTCCACGATGAGCCACATTCACCATTTACCGATCGTTCGTTTGATGATGATAGTTTCGATACAAAGAACAACAGTTTTGGTGGCAATTTCACGAACAGTTCTAATAATCAAAAGCCGGAATGGAAACGCTATAAACAATACACACGCAGCGATATTATGTCTGCCATACAATGTGTACGTGAAGGCATGAGTGCTTTGCAGGCCTCACGCAAATTTGGTGTGCCCTCACGAACTCTGTACGACAAAGTCAAAAAGCTAGGCATTACCACGGGCCGGCCTATGAATCGTACGATGAAACGTAGTCCCAGTAGCGTAGAATCCCCGGCTGCTTTTCCCTATTCCCATGGCTACGGACAGGCTTCGACTGTGGTAATGCACGATACTGCAGGCGGTCCGAGGGATGAACGGGAATTGAAAGACCATCCACGTAATAACGATCATCATCATTTGACATCCTCTCTACCACATCCAGCGGCCGCTTTGCTGGATCATGCTTTTCTGCAACAGGCTTTAGAAAATCGTGGAGGCGGTGATATAGCCGGTCAGAAAGCCTTACATGCTATGGCCATGGCTGCTGCTGCACATGCTGCCCATGCCAATCGTATGTCTACTAGTCCGGGACCCAATGGCAATGCTGTTGTACGTTCGCCTAGTCCCAATAGTTTTGCGGCCTTAAAATATGGCACCTTACGCAGTGCCGAACACGAATTAATGGAACGCCAAGAATTAGTAGAGCGTGAACGGGAAAGAGAACGTGACTATATGGATcatgagagagaaagagaacttGATTCTGAACATGAACATGATTTGCAACGCACTGATGATCGTGAGGATGATGAAGAAGACCAAGTAGAAGATTTGTCGGTGGCACGCAAAGACAGTAGTAATCTTACGCCGCCAGAAGCTCATGTCGAATCGCCATTTTCCCCCAACTTACAAGCAGCACCTAGTGAAACTGAAAAATCTGTTATAATGAGCACaacaaaattgcaaacaaacacaaacacaagcaGCATTGAAGACAACTCCTCTaccagcaacaccaacaacaccaataccaccaccgccacctcATTTATTAACGAGACCAACATGAAACGTGAAGTGGTAATTGACGATATACGGGCGGACTGA
- Protein Sequence
- MGGPPGPLSSLGPPEGQTYCLRWNNHKSNLVEILDSLIRAESYVDCTIIVDDNQFKAHRVILAANSPYFESILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLSEEHAERTTSNPYTSTLAPTNPYFSVSTTSSPSTTGLLTNSTKASLKESDNYRNNNSSAVISTSSNISPSAAPSSSSSPPYTNYKSPYASLYTKSPGPNVSQSNPAIQAQTTNNQQTTTTTTTSSNLTPTSERSPAQWPLSPSAAAVAMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQTNPADSSQQLLPLMPNASSGNIKTDKSSSSGSVSGGNLGNLDKSLSSLSNNHSFNGSDYGDKKFHDEPHSPFTDRSFDDDSFDTKNNSFGGNFTNSSNNQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSVESPAAFPYSHGYGQASTVVMHDTAGGPRDERELKDHPRNNDHHHLTSSLPHPAAALLDHAFLQQALENRGGGDIAGQKALHAMAMAAAAHAAHANRMSTSPGPNGNAVVRSPSPNSFAALKYGTLRSAEHELMERQELVERERERERDYMDHERERELDSEHEHDLQRTDDREDDEEDQVEDLSVARKDSSNLTPPEAHVESPFSPNLQAAPSETEKSVIMSTTKLQTNTNTSSIEDNSSTSNTNNTNTTTATSFINETNMKREVVIDDIRAD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01315432;
- 90% Identity
- iTF_01313911;
- 80% Identity
- iTF_01314779;