Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: -
Assembly: GCA_958299815.1
Location: OY283149.1:156355829-156361022[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.17 18 7.1 2.3 1 23 218 241 218 241 0.88

2 21 0.0037 0.39 12.3 0.3 1 23 247 270 247 270 0.97

3 21 0.00021 0.022 16.2 2.4 2 23 295 316 295 316 0.96

4 21 0.016 1.7 10.3 2.0 1 23 393 416 393 416 0.96

5 21 0.0027 0.28 12.7 4.7 1 23 423 445 423 445 0.99

6 21 1.2 1.3e+02 4.4 0.2 2 19 454 471 453 473 0.94

7 21 0.0003 0.031 15.7 0.2 1 23 488 510 488 510 0.98

8 21 0.028 2.9 9.5 0.8 2 20 523 541 522 544 0.91

9 21 0.0034 0.35 12.4 1.2 1 23 624 647 624 647 0.93

10 21 0.036 3.8 9.2 0.4 1 21 654 674 654 675 0.95

11 21 0.16 17 7.1 1.2 2 23 687 709 686 709 0.96

12 21 0.017 1.8 10.2 1.5 2 23 724 745 723 745 0.97

13 21 7.9e-07 8.3e-05 23.8 0.6 2 23 752 773 751 773 0.96

14 21 4.4 4.6e+02 2.6 3.4 1 21 947 967 947 968 0.93

15 21 0.064 6.8 8.4 0.2 5 23 1014 1033 1011 1033 0.91

16 21 0.0084 0.89 11.2 1.5 3 23 1042 1062 1041 1062 0.96

17 21 0.0026 0.28 12.8 0.2 2 19 1089 1106 1088 1108 0.94

18 21 0.00023 0.024 16.1 1.9 1 23 1160 1183 1160 1183 0.98

19 21 0.42 44 5.8 0.7 1 23 1220 1243 1220 1243 0.94

20 21 0.47 49 5.7 3.1 1 23 1276 1299 1276 1299 0.94

21 21 0.0036 0.38 12.3 4.6 3 23 1327 1347 1325 1347 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.17	18	7.1	2.3	1	23	218	241	218	241	0.88
2	21	0.0037	0.39	12.3	0.3	1	23	247	270	247	270	0.97
3	21	0.00021	0.022	16.2	2.4	2	23	295	316	295	316	0.96
4	21	0.016	1.7	10.3	2.0	1	23	393	416	393	416	0.96
5	21	0.0027	0.28	12.7	4.7	1	23	423	445	423	445	0.99
6	21	1.2	1.3e+02	4.4	0.2	2	19	454	471	453	473	0.94
7	21	0.0003	0.031	15.7	0.2	1	23	488	510	488	510	0.98
8	21	0.028	2.9	9.5	0.8	2	20	523	541	522	544	0.91
9	21	0.0034	0.35	12.4	1.2	1	23	624	647	624	647	0.93
10	21	0.036	3.8	9.2	0.4	1	21	654	674	654	675	0.95
11	21	0.16	17	7.1	1.2	2	23	687	709	686	709	0.96
12	21	0.017	1.8	10.2	1.5	2	23	724	745	723	745	0.97
13	21	7.9e-07	8.3e-05	23.8	0.6	2	23	752	773	751	773	0.96
14	21	4.4	4.6e+02	2.6	3.4	1	21	947	967	947	968	0.93
15	21	0.064	6.8	8.4	0.2	5	23	1014	1033	1011	1033	0.91
16	21	0.0084	0.89	11.2	1.5	3	23	1042	1062	1041	1062	0.96
17	21	0.0026	0.28	12.8	0.2	2	19	1089	1106	1088	1108	0.94
18	21	0.00023	0.024	16.1	1.9	1	23	1160	1183	1160	1183	0.98
19	21	0.42	44	5.8	0.7	1	23	1220	1243	1220	1243	0.94
20	21	0.47	49	5.7	3.1	1	23	1276	1299	1276	1299	0.94
21	21	0.0036	0.38	12.3	4.6	3	23	1327	1347	1325	1347	0.95

Sequence Information

Coding Sequence: atggATAGCTTTAATGTTAAAGAATGTTATATTAATGGCATTCAATACAAATGTCGTACTTGCCTTAATCCTGGAGTTACTGTGTGTTCTTTGaatgggaaatttaaaaatgcaaaaacctGGCTAGATTTGTTAAAGGATGCAGGTCAACTAAAGATATCAACTGATGAAGATTTATTGCCACAGACTATGTGTTGTGTATGTTCTGAAAAGCTTAAAATCTCATACGATTTCCTACTGCAGATTCGTgatgtaaatagaaaatttctaaaactaTTGGGTAAATCAGAAGACCCGCTACAGAATGGTTTTGATGAACAATTGTCTGATTTTTTAAAGGAACCAACCATGAATTTACCCAAGCAAGAGTATATATcagaaataaaattggaaattgaAGACACCATTTTAGAGcatgaagAGAACGATAAATCCATTTTAGAAAAAGAACTGATTATATTTGACCCTGAACACTCTGATGACTACAAACAGTATGAAAAAAGCATATCATTGGAGGATAGTTATAGACCAAGCAAACGGTTGAAGGGAGAAAATGACAGTGTTGAAAACATAGAtCCGCCCACCAAAAAACGTAGAGGTGGACGAAAGGTACCGGATTATtatgataaaattgaaaagattaACGATCGTTTTGTATGTTTCATATGCCAAAAATCATTTCCGTTTAGGAAAAACTGCGGCCGTCATATTGTTAATATACATTTTCGTCCAAAAAATTTTCCTTGTGAATTTTGTGGTGAAAGATTTAGTGGTAAGAATGAAAAATATGCGCACATCAAACGTGTCCATCCGAAATCCAAACAAAGGAAATTTCCATTCGGCAGTCGTTTGTATAGCAAACCAACAAAGTGGCAACTAGCCGAATGTAAATTGTGTAATACAACTTTTAGCACAACTAAAGACCTCAAAAAGCACTTGTTACAGCACAGCAGCATAGATACTCTTGATAATTTAGATTCAAACAGTCAAATTGTTCaacatttatttgcaaatacaaacgatttaaatacaataaaagaaagtatATGCCGTGACATCCACGAGAAGCAGTGGTTTAAATACTACAATGTattaaatgaatattcatttgaaatgtcCATTACTGATACGGAGTTAGAAGATTTGGAAGATGATGCCATACAGTCCAATAGCAAATATAAATGTGAGCTGTGTAAtcaacaattttcatttaaatttcaaacgtTTGCTCACTTAAAAGAGGCACACGAAGAGGAGGTGGTGCCTTACACATGTAGTTTGTGTAAAACGGAATTTGTATCGTTGAAAATGTTTCAACACCATACTAGAACACATTGCCGCAATAGACACAAAATGATGGTGTGTCCAAGCTGCCCGGCAAAATTTGTATGGCCCGATAATCTGAAAAATCACAATTGTGCCGCTAAAGTTGTGGTCTCTTCGCTTACAGATAATAAGGATTATACGTGCAATATATGTGATCAGGTTTTTGAGGAACTGActgaatatgaaaaacatttagaaTCTCATAAATCTGGCAGCACAGTGTCTAACAAAGCTATAATCAAGTGTGGTCTGTGCATAAAATCCTTTAAGAAAATCTCACATCTGAGAGAACATATGCCTGTACATGCCGATGGCAAAACTGGTATCGACTTCCAAAACAGCATTTACGTAAACATTTTCGAAAGGTCAAAAACTCTCGATTTTGGCCTGCTGCAACTGGTAATAAAAAAAGCTTACCGAAGATCTCAAATTGGTCGTTACTATCGCGCCTTAGATAAAAATGGCTATGAAATGGATATTTTAGATTCAGATTCTGCCGAAGAAGATTCagaagtttttaataaacagaaaataaaacaggAATACAAATGTGAACTTTGTAGCGAAATATACAAAAGACGCAAACTTCTGCTAAATCATCAGTTTGAAATGCACAATGATGTGCCTCTGCCATACACTTGTAATTCCTGTACCCAACAGTATGTCAGCAATGATTTGTTGCAATATCATTTGTTAAGAGATTGCTCAAATGAACATCGTCGTGTAGCTACACAATGTGAATTTTGTAAGGCTCGATTTATATGGCCAAATAATctctttaaacacaaaaaaatgcaGCACAAACATCAAAAGAATTCACGACCTGAAATAGTGAGAAAACTCAAGTGTGAGTTTTGTGAAAAAGTCTTCATATGGCACAAAGATCTGGTTCGGCATCGAAAAGTCCATACAGAAGTTAAAAGACTCCCATGTCCACATTGTGGACGTGAGTTTATACGCAAGGATAGCCTATTATCTCATATGCGTTTACATAATGCCAAAACCCTATCTATAACTTTAAATTCCAACAGAACTTTAGACTATATACTGCCACATCTATTGAAACCTCATGGTTGCAAACAAATCAGATGTATGATCTGCTATTCCGAGCACTATCGTATACGTGATTTGCATTCCCATTTAAGATCACATCGATACAACATTCATTtcgaaaaacgaaaagaaacagaaactaTTGACACCATATCAGCACAATTGTATCCAGACGAAACGGTCATGTGTGAAGAAGATTTAATAAAACGTATCCGATCAGACATTGCTGCTGAAAAGAATTTGGAACGTTTTTATTccataacaaatgaaaatggTTGTGAAGTGAATTTGGACAGTTCAGAGACGGACACGGACACTTCAGATAACGAGGAGAATAACAGCAAAGAGGACAAGTTACAATGTCATTATACATGTGATTTATGTCGTTCACTCAGTTTCAATcggaaatttaaacttttcaaacaTCATAATGAAAACCATACATGGGAAGAAGCTCCACATGTTTGTATGCATTGCAATGGTCGTTTCTTGTCCAAACATATGTTGCAGCTACATTACAGGAGTCAatgtaaaaatacaataaaaagacACTTTTGTCGTCGTTGTCCGCTGGTTTTCATGTGGGAAAACAATCTTCAACTTCATTTTACAATGGAACATGGCCAAGAAACTGATCCGATACGCCGCCCTGCGTGTATTATTTGTCAGGAGAAATTCGCTAATCAGTGGGAAATCAAACGCCATATGAGTCAATCTCATTCTAATGATGATAATGTCCGTTATTGTCTTTTCTGTCCGAGAACATTTTATAATATTGCACATCTTAACGAACATTTAACACGTCATCCTATTACCGAGATTGACATTCAAACGGCTGAGGtcatattaaataccacctgttGGCCAAATAACGATAAAATTATCAAATGTAAATTATGTGGTCAAACATTTGATACCATGGCCAacttaaatgaacatttttcacCCTTCAATCCACAAAACTTGTGTGCAACACAACATTCTCTCGCCaattattcgataacaaatCAAAAAGGTTTTGAATTGCATTTAGAAATGGATTCGGAATCAGAGATGGAAGACGAAATAGACACTGGGGGCGAACAGAAACTACATCCCTATACTTGTTACTTGTGCGATGTATCGTATAAACGAAAATATCAAATGGCTCAACACCAACGTTCCATGCACAATTATGAAGACCTTGCTTTGAAATGTGAACGTTGCATATTTCGAACGGTGTGTCAGAGAATTTTAGACTACCACCAGTCGACCCAATGTTTAAATGAAGAAAAGCAATACGAATGTAGAgattgcaaatttaaatttatgtggcAGGAAAATCTCGATAATCATGTGTCCATATTTCATTCACCAAAGGATAAATGCCCGAAGGAAGAGcatgttattaaaacaaaaattacaaataaaattgtacagCAGGCGAATAGTATAGTTCCATATGTTTTTGAATGCATGGCTTGTCGTCGTCACTTTGCTAATAAGGCAGATTATAGGATGCATTTTAAAAACACTCACTTCAGTGATAACCAACTAACAACTGGCAGTAACACAAAATCAACCAAACACACCAcgttaaaaactgaaaacaagcATCTCTGTGCCTTCTGTGGAATGTCATTTCCGTATTATTCTCATCTCATGATTCATATGCACCGTCACACCGGCGAAAGGTCATGGAAGGCCTAA
Protein Sequence: MDSFNVKECYINGIQYKCRTCLNPGVTVCSLNGKFKNAKTWLDLLKDAGQLKISTDEDLLPQTMCCVCSEKLKISYDFLLQIRDVNRKFLKLLGKSEDPLQNGFDEQLSDFLKEPTMNLPKQEYISEIKLEIEDTILEHEENDKSILEKELIIFDPEHSDDYKQYEKSISLEDSYRPSKRLKGENDSVENIDPPTKKRRGGRKVPDYYDKIEKINDRFVCFICQKSFPFRKNCGRHIVNIHFRPKNFPCEFCGERFSGKNEKYAHIKRVHPKSKQRKFPFGSRLYSKPTKWQLAECKLCNTTFSTTKDLKKHLLQHSSIDTLDNLDSNSQIVQHLFANTNDLNTIKESICRDIHEKQWFKYYNVLNEYSFEMSITDTELEDLEDDAIQSNSKYKCELCNQQFSFKFQTFAHLKEAHEEEVVPYTCSLCKTEFVSLKMFQHHTRTHCRNRHKMMVCPSCPAKFVWPDNLKNHNCAAKVVVSSLTDNKDYTCNICDQVFEELTEYEKHLESHKSGSTVSNKAIIKCGLCIKSFKKISHLREHMPVHADGKTGIDFQNSIYVNIFERSKTLDFGLLQLVIKKAYRRSQIGRYYRALDKNGYEMDILDSDSAEEDSEVFNKQKIKQEYKCELCSEIYKRRKLLLNHQFEMHNDVPLPYTCNSCTQQYVSNDLLQYHLLRDCSNEHRRVATQCEFCKARFIWPNNLFKHKKMQHKHQKNSRPEIVRKLKCEFCEKVFIWHKDLVRHRKVHTEVKRLPCPHCGREFIRKDSLLSHMRLHNAKTLSITLNSNRTLDYILPHLLKPHGCKQIRCMICYSEHYRIRDLHSHLRSHRYNIHFEKRKETETIDTISAQLYPDETVMCEEDLIKRIRSDIAAEKNLERFYSITNENGCEVNLDSSETDTDTSDNEENNSKEDKLQCHYTCDLCRSLSFNRKFKLFKHHNENHTWEEAPHVCMHCNGRFLSKHMLQLHYRSQCKNTIKRHFCRRCPLVFMWENNLQLHFTMEHGQETDPIRRPACIICQEKFANQWEIKRHMSQSHSNDDNVRYCLFCPRTFYNIAHLNEHLTRHPITEIDIQTAEVILNTTCWPNNDKIIKCKLCGQTFDTMANLNEHFSPFNPQNLCATQHSLANYSITNQKGFELHLEMDSESEMEDEIDTGGEQKLHPYTCYLCDVSYKRKYQMAQHQRSMHNYEDLALKCERCIFRTVCQRILDYHQSTQCLNEEKQYECRDCKFKFMWQENLDNHVSIFHSPKDKCPKEEHVIKTKITNKIVQQANSIVPYVFECMACRRHFANKADYRMHFKNTHFSDNQLTTGSNTKSTKHTTLKTENKHLCAFCGMSFPYYSHLMIHMHRHTGERSWKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01314893;
90% Identity: iTF_01315776;
80% Identity: -