Scar015370.1
Basic Information
- Insect
- Sarcophaga carnaria
- Gene Symbol
- dsx
- Assembly
- GCA_958299815.1
- Location
- OY283150.1:142596343-142597287[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-23 7.1e-19 68.5 15.6 2 47 43 88 42 88 0.97
Sequence Information
- Coding Sequence
- ATGGTTTCTGAGGACACCAACTGGAATAGCAGCGACACAATGTCCGATACGGACGTGCACGATTCGAAAAATGACATCTGCGGCGGTGCATCCAGCTCCAGTGGGAGCTCTGGCGCACCACGTACCAAACCGAATTGTGCACGCTGCCACAATCATggacataaaattaaattgaagggCCACAAACGGTATTGCAGGTATCGCAATTGTAATTGTGAAAAATGTCGCCTGACCGCCGATCGTCAGCGTGTCATGGCTTTACAGACGGCACTGAGACGTGCACAACAGCAGGATGAACAGCGTATATTGCAGATGAATGAAGTACCGCCGGTGGTGCATCCACCAACCGCTTTGCTCAAGGCCCActatcatcatcaccatcatttgCAGCATCACATAACGGAACAATtgcatcaccatcatcatcccCATTTGGTGGATCCCACAGCAGCCGCATCAGTAATGGGTGGCATACCGccgcatcatcatcatcatgtggCTCATGCTGCGGCCATAACGACTATACGTTCACCACCCCATAGTGATCACAGTGCCAATGGTGGTACAGTGATTGGTGCTAGTGGTGGTGGGGGTGTTAATAGTAGTGGAGGGGGTGGTAGTAGCGGTACGATTGTAAGCAGTGGTAGCGCTGGCCAGGCCACTCTCAATGGCATGGCTAGTAGCAGCAGTGTTGCATCAAGTTCCACAGTTGGTCCGCCTCATCATGCCTCACCCGATCAGCTACAGCATAAtaaccaccatcatcatcatcatccccACCCACATTTGGCGGCTGTGCCACCAACAGCCCAATCTGTCGATAGTTCATGTGATTCTTCGTCACCGTCACCATCGTCCACATCGGGAGCAGTATCGTTGCCAGTTAATCGTAAAACTGTACCAGAACATCATCAAAACGGTGCAGATATGTCAATAGGTAAGTAG
- Protein Sequence
- MVSEDTNWNSSDTMSDTDVHDSKNDICGGASSSSGSSGAPRTKPNCARCHNHGHKIKLKGHKRYCRYRNCNCEKCRLTADRQRVMALQTALRRAQQQDEQRILQMNEVPPVVHPPTALLKAHYHHHHHLQHHITEQLHHHHHPHLVDPTAAASVMGGIPPHHHHHVAHAAAITTIRSPPHSDHSANGGTVIGASGGGGVNSSGGGGSSGTIVSSGSAGQATLNGMASSSSVASSSTVGPPHHASPDQLQHNNHHHHHHPHPHLAAVPPTAQSVDSSCDSSSPSPSSTSGAVSLPVNRKTVPEHHQNGADMSIGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01261031;
- 90% Identity
- iTF_01315527; iTF_01314705;
- 80% Identity
- iTF_01315527;